RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 HNRNPLLQ8WVV9 542 aaKnown RBP15.59■□□□□ 0.09
PHGDH-233ENST00000642021 PLIN2Q99541 437 aa15.59■□□□□ 0.09
PHGDH-233ENST00000642021 NAPGQ99747 312 aaPredicted RBP15.59■□□□□ 0.09
PHGDH-233ENST00000642021 TFCP2L1Q9NZI6 479 aa15.59■□□□□ 0.09
PHGDH-233ENST00000642021 CALCOCO1Q9P1Z2 691 aa15.59■□□□□ 0.09
PHGDH-233ENST00000642021 VSNL1P62760 191 aa15.58■□□□□ 0.09
PHGDH-233ENST00000642021 FBXO33Q7Z6M2 555 aa15.58■□□□□ 0.09
PHGDH-233ENST00000642021 PDE11AQ9HCR9 933 aa15.58■□□□□ 0.09
PHGDH-233ENST00000642021 ADAM21Q9UKJ8 722 aa15.58■□□□□ 0.09
PHGDH-233ENST00000642021 L1RE1Q9UN81 338 aa15.58■□□□□ 0.09
PHGDH-233ENST00000642021 MYH14Q7Z406 1995 aaKnown RBP15.58■□□□□ 0.08
PHGDH-233ENST00000642021 PARP1P09874 1014 aaKnown RBP15.58■□□□□ 0.08
PHGDH-233ENST00000642021 USP5P45974 858 aa15.58■□□□□ 0.08
PHGDH-233ENST00000642021 AMPD2Q01433 879 aa15.58■□□□□ 0.08
PHGDH-233ENST00000642021 SPAG1Q07617 926 aa15.58■□□□□ 0.08
PHGDH-233ENST00000642021 SF3B3Q15393 1217 aaKnown RBP15.58■□□□□ 0.08
PHGDH-233ENST00000642021 NCAPH2Q6IBW4 605 aa15.58■□□□□ 0.08
PHGDH-233ENST00000642021 BICDL1Q6ZP65 573 aa15.58■□□□□ 0.08
PHGDH-233ENST00000642021 BLIDQ8IZY5 108 aa15.58■□□□□ 0.08
PHGDH-233ENST00000642021 LRRC15Q8TF66 581 aa15.58■□□□□ 0.08
PHGDH-233ENST00000642021 EEF2KMTQ96G04 330 aa15.58■□□□□ 0.08
PHGDH-233ENST00000642021 TMEM60Q9H2L4 133 aa15.58■□□□□ 0.08
PHGDH-233ENST00000642021 RNF216Q9NWF9 866 aaPredicted RBP15.58■□□□□ 0.08
PHGDH-233ENST00000642021 TSPY2A6NKD2 308 aa15.58■□□□□ 0.08
PHGDH-233ENST00000642021 N4BP1O75113 896 aaKnown RBP15.58■□□□□ 0.08
PHGDH-233ENST00000642021 SLC35G1Q2M3R5 365 aa15.58■□□□□ 0.08
PHGDH-233ENST00000642021 ADSSL1Q8N142 457 aa15.58■□□□□ 0.08
PHGDH-233ENST00000642021 EPN1Q9Y6I3 576 aaPredicted RBP15.58■□□□□ 0.08
PHGDH-233ENST00000642021 USP17L8P0C7I0 530 aa15.57■□□□□ 0.08
PHGDH-233ENST00000642021 STAT6P42226 847 aa15.57■□□□□ 0.08
PHGDH-233ENST00000642021 KCNQ4P56696 695 aa15.57■□□□□ 0.08
PHGDH-233ENST00000642021 ARL6IP4Q66PJ3 421 aaKnown RBP15.57■□□□□ 0.08
PHGDH-233ENST00000642021 MARCH10Q8NA82 808 aaPredicted RBP15.57■□□□□ 0.08
PHGDH-233ENST00000642021 TRERF1Q96PN7 1200 aa15.57■□□□□ 0.08
PHGDH-233ENST00000642021 IL17RBQ9NRM6 502 aa15.57■□□□□ 0.08
PHGDH-233ENST00000642021 GUCA1BQ9UMX6 200 aa15.57■□□□□ 0.08
PHGDH-233ENST00000642021 NDUFA10O95299 355 aa15.57■□□□□ 0.08
PHGDH-233ENST00000642021 LONP1P36776 959 aaKnown RBP15.57■□□□□ 0.08
PHGDH-233ENST00000642021 DISC1Q9NRI5 854 aa15.57■□□□□ 0.08
PHGDH-233ENST00000642021 MYH8P13535 1937 aa15.57■□□□□ 0.08
PHGDH-233ENST00000642021 H7C1D1 291 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 ENC1O14682 589 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 KLRC4O43908 158 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 WDR59Q6PJI9 974 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 MB21D1Q8N884 522 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 HDAC6Q9UBN7 1215 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 CTAGE15A4D2H0 777 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 ADAMTS2O95450 1211 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 CTAGE8P0CG41 777 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 TUBB2AQ13885 445 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 DDB1Q16531 1140 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 CTAGE6Q86UF2 777 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 TXNRD3Q86VQ6 643 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 CTAGE4Q8IX94 777 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 CNPY4Q8N129 248 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 ANKRD20A12PQ8NF67 263 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 ZNF507Q8TCN5 953 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 TUBB2BQ9BVA1 445 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 CRNKL1Q9BZJ0 848 aaKnown RBP15.56■□□□□ 0.08
PHGDH-233ENST00000642021 RMND1Q9NWS8 449 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 MYO6Q9UM54 1294 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 PHLPP1O60346 1717 aa15.56■□□□□ 0.08
PHGDH-233ENST00000642021 M0R2N6 131 aa15.55■□□□□ 0.08
PHGDH-233ENST00000642021 KCNQ2O43526 872 aa15.55■□□□□ 0.08
PHGDH-233ENST00000642021 TFAP4Q01664 338 aa15.55■□□□□ 0.08
PHGDH-233ENST00000642021 CCDC24Q8N4L8 307 aa15.55■□□□□ 0.08
PHGDH-233ENST00000642021 DYNLL2Q96FJ2 89 aa15.55■□□□□ 0.08
PHGDH-233ENST00000642021 ATP8A2Q9NTI2 1148 aa15.55■□□□□ 0.08
PHGDH-233ENST00000642021 MCM9Q9NXL9 1143 aa15.55■□□□□ 0.08
PHGDH-233ENST00000642021 PCDHA4Q9UN74 947 aa15.55■□□□□ 0.08
PHGDH-233ENST00000642021 DOT1LQ8TEK3 1739 aa15.55■□□□□ 0.08
PHGDH-233ENST00000642021 PES1O00541 588 aaKnown RBP15.55■□□□□ 0.08
PHGDH-233ENST00000642021 TRIM14Q14142 442 aa15.55■□□□□ 0.08
PHGDH-233ENST00000642021 WHAMMP3Q1A5X7 153 aa15.55■□□□□ 0.08
PHGDH-233ENST00000642021 HDXQ7Z353 690 aa15.55■□□□□ 0.08
PHGDH-233ENST00000642021 OR8K1Q8NGG5 319 aa15.55■□□□□ 0.08
PHGDH-233ENST00000642021 PYM1Q9BRP8 204 aaKnown RBP15.55■□□□□ 0.08
PHGDH-233ENST00000642021 MYO1AQ9UBC5 1043 aa15.55■□□□□ 0.08
PHGDH-233ENST00000642021 MTMR7Q9Y216 660 aa15.55■□□□□ 0.08
PHGDH-233ENST00000642021 MYH13Q9UKX3 1938 aa15.54■□□□□ 0.08
PHGDH-233ENST00000642021 NKRFO15226 690 aaKnown RBP eCLIP15.54■□□□□ 0.08
PHGDH-233ENST00000642021 INF2Q27J81 1249 aa15.54■□□□□ 0.08
PHGDH-233ENST00000642021 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.54■□□□□ 0.08
PHGDH-233ENST00000642021 PCDHA6Q9UN73 950 aa15.54■□□□□ 0.08
PHGDH-233ENST00000642021 PCDHA8Q9Y5H6 950 aa15.54■□□□□ 0.08
PHGDH-233ENST00000642021 LGALS16A8MUM7 142 aa15.54■□□□□ 0.08
PHGDH-233ENST00000642021 CYTH3O43739 400 aa15.54■□□□□ 0.08
PHGDH-233ENST00000642021 CALML3P27482 149 aa15.54■□□□□ 0.08
PHGDH-233ENST00000642021 HERVK_113P62684 666 aa15.54■□□□□ 0.08
PHGDH-233ENST00000642021 IRX5P78411 483 aaPredicted RBP15.54■□□□□ 0.08
PHGDH-233ENST00000642021 DTHD1Q6ZMT9 781 aa15.54■□□□□ 0.08
PHGDH-233ENST00000642021 SLC51AQ86UW1 340 aa15.54■□□□□ 0.08
PHGDH-233ENST00000642021 TXLNBQ8N3L3 684 aa15.54■□□□□ 0.08
PHGDH-233ENST00000642021 PNMA1Q8ND90 353 aa15.54■□□□□ 0.08
PHGDH-233ENST00000642021 KAT14Q9H8E8 782 aa15.54■□□□□ 0.08
PHGDH-233ENST00000642021 AGPAT5Q9NUQ2 364 aa15.54■□□□□ 0.08
PHGDH-233ENST00000642021 LUC7L2Q9Y383 392 aaKnown RBP15.54■□□□□ 0.08
PHGDH-233ENST00000642021 USP17L3A6NCW0 530 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 USP17L4A6NCW7 530 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 RASSF10A6NK89 507 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms