RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 COBLO75128 1261 aa19.25■□□□□ 0.67
PHGDH-229ENST00000641891 ERCC5P28715 1186 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-229ENST00000641891 ARL6IP4Q66PJ3 421 aaKnown RBP19.25■□□□□ 0.67
PHGDH-229ENST00000641891 AKT1S1Q96B36 256 aa19.25■□□□□ 0.67
PHGDH-229ENST00000641891 GSDMAQ96QA5 445 aa19.25■□□□□ 0.67
PHGDH-229ENST00000641891 UBA5Q9GZZ9 404 aa19.25■□□□□ 0.67
PHGDH-229ENST00000641891 KCND1Q9NSA2 647 aa19.25■□□□□ 0.67
PHGDH-229ENST00000641891 FRMPD2Q68DX3 1309 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-229ENST00000641891 SYNRGQ9UMZ2 1314 aa19.25■□□□□ 0.67
PHGDH-229ENST00000641891 NPR1P16066 1061 aa19.25■□□□□ 0.67
PHGDH-229ENST00000641891 NAPAP54920 295 aa19.25■□□□□ 0.67
PHGDH-229ENST00000641891 EIF6P56537 245 aaKnown RBP19.25■□□□□ 0.67
PHGDH-229ENST00000641891 KARSQ15046 597 aaKnown RBP19.25■□□□□ 0.67
PHGDH-229ENST00000641891 MSL1Q68DK7 614 aa19.25■□□□□ 0.67
PHGDH-229ENST00000641891 DPP8Q6V1X1 898 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-229ENST00000641891 PPP1R3GB7ZBB8 358 aa19.24■□□□□ 0.67
PHGDH-229ENST00000641891 AKR1B1P15121 316 aa19.24■□□□□ 0.67
PHGDH-229ENST00000641891 LONP1P36776 959 aaKnown RBP19.24■□□□□ 0.67
PHGDH-229ENST00000641891 LRRC47Q8N1G4 583 aaKnown RBP19.24■□□□□ 0.67
PHGDH-229ENST00000641891 NLGN1Q8N2Q7 840 aa19.24■□□□□ 0.67
PHGDH-229ENST00000641891 PPP1R13BQ96KQ4 1090 aa19.24■□□□□ 0.67
PHGDH-229ENST00000641891 PIGSQ96S52 555 aa19.24■□□□□ 0.67
PHGDH-229ENST00000641891 QSER1Q2KHR3 1735 aa19.24■□□□□ 0.67
PHGDH-229ENST00000641891 MMP10P09238 476 aa19.23■□□□□ 0.67
PHGDH-229ENST00000641891 NOVP48745 357 aa19.23■□□□□ 0.67
PHGDH-229ENST00000641891 GABPAQ06546 454 aa19.23■□□□□ 0.67
PHGDH-229ENST00000641891 ZMYND12Q9H0C1 365 aa19.23■□□□□ 0.67
PHGDH-229ENST00000641891 SLURP2P0DP57 97 aa19.23■□□□□ 0.67
PHGDH-229ENST00000641891 GALNT17Q6IS24 598 aa19.23■□□□□ 0.67
PHGDH-229ENST00000641891 RRP36Q96EU6 259 aaKnown RBP19.23■□□□□ 0.67
PHGDH-229ENST00000641891 USP40Q9NVE5 1235 aa19.23■□□□□ 0.67
PHGDH-229ENST00000641891 CTNND2Q9UQB3 1225 aa19.23■□□□□ 0.67
PHGDH-229ENST00000641891 SMCO2A6NFE2 343 aa19.22■□□□□ 0.67
PHGDH-229ENST00000641891 APBA3O96018 575 aa19.22■□□□□ 0.67
PHGDH-229ENST00000641891 TBX2Q13207 712 aaPredicted RBP19.22■□□□□ 0.67
PHGDH-229ENST00000641891 SPATA1Q5VX52 437 aa19.22■□□□□ 0.67
PHGDH-229ENST00000641891 DTHD1Q6ZMT9 781 aa19.22■□□□□ 0.67
PHGDH-229ENST00000641891 KCNQ5Q9NR82 932 aa19.22■□□□□ 0.67
PHGDH-229ENST00000641891 MTMR4Q9NYA4 1195 aa19.22■□□□□ 0.67
PHGDH-229ENST00000641891 PAXBP1Q9Y5B6 917 aa19.22■□□□□ 0.67
PHGDH-229ENST00000641891 GTPBP6O43824 516 aaPredicted RBP19.22■□□□□ 0.67
PHGDH-229ENST00000641891 PDHBP11177 359 aa19.22■□□□□ 0.67
PHGDH-229ENST00000641891 APTXQ7Z2E3 356 aaKnown RBP19.22■□□□□ 0.67
PHGDH-229ENST00000641891 PLIN2Q99541 437 aa19.22■□□□□ 0.67
PHGDH-229ENST00000641891 TMX1Q9H3N1 280 aa19.22■□□□□ 0.67
PHGDH-229ENST00000641891 PLIN4Q96Q06 1357 aa19.22■□□□□ 0.67
PHGDH-229ENST00000641891 CTIFO43310 598 aaKnown RBP19.21■□□□□ 0.67
PHGDH-229ENST00000641891 STAT6P42226 847 aa19.21■□□□□ 0.67
PHGDH-229ENST00000641891 DHX8Q14562 1220 aaKnown RBP19.21■□□□□ 0.67
PHGDH-229ENST00000641891 CCDC112Q8NEF3 446 aa19.21■□□□□ 0.67
PHGDH-229ENST00000641891 DISC1Q9NRI5 854 aa19.21■□□□□ 0.67
PHGDH-229ENST00000641891 SEC63Q9UGP8 760 aaKnown RBP19.21■□□□□ 0.67
PHGDH-229ENST00000641891 SUGT1Q9Y2Z0 365 aa19.21■□□□□ 0.67
PHGDH-229ENST00000641891 TXLNAP40222 546 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 CDC42EP5Q6NZY7 148 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 TMEM139Q8IV31 216 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 DBNDD1Q9H9R9 158 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 PSDA5PKW4 1024 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-229ENST00000641891 TEX33O43247 280 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 NRDCO43847 1150 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 KCNJ6P48051 423 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 NR1I3Q14994 352 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 LETM2Q2VYF4 491 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 NAALADL2Q58DX5 795 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 RRAGBQ5VZM2 374 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 SPECC1LQ69YQ0 1117 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 LRRC15Q8TF66 581 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 ZNF622Q969S3 477 aaKnown RBP eCLIP19.2■□□□□ 0.662e-6■■■□□ 15.2
PHGDH-229ENST00000641891 PYM1Q9BRP8 204 aaKnown RBP19.2■□□□□ 0.66
PHGDH-229ENST00000641891 PDCL3Q9H2J4 239 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 TMEM260Q9NX78 707 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 PCDHAC2Q9Y5I4 1007 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 MYH8P13535 1937 aa19.2■□□□□ 0.66
PHGDH-229ENST00000641891 IGKV6D-41A0A0C4DH26 115 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 A0A1B0GTH6 734 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 G3V3G9 751 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 ALDH1B1P30837 517 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 PDE6BP35913 854 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 ADKP55263 362 aaKnown RBP19.19■□□□□ 0.66
PHGDH-229ENST00000641891 CT47A1Q5JQC4 288 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-229ENST00000641891 DCAF8Q5TAQ9 597 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 CDKAL1Q5VV42 579 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 C6orf50Q9HD87 102 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 PARP3Q9Y6F1 533 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 CCNT1O60563 726 aaKnown RBP19.19■□□□□ 0.66
PHGDH-229ENST00000641891 RPN1P04843 607 aaKnown RBP19.19■□□□□ 0.66
PHGDH-229ENST00000641891 NFIAQ12857 509 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 NONOQ15233 471 aaKnown RBP eCLIP19.19■□□□□ 0.66
PHGDH-229ENST00000641891 APOBEC3HQ6NTF7 200 aaKnown RBP19.19■□□□□ 0.66
PHGDH-229ENST00000641891 KRT25Q7Z3Z0 450 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 RASSF8Q8NHQ8 419 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 CCDC12Q8WUD4 166 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-229ENST00000641891 MASTLQ96GX5 879 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 RIOX1Q9H6W3 641 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 GPCPD1Q9NPB8 672 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 BIN2Q9UBW5 565 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-229ENST00000641891 SERPINB13Q9UIV8 391 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 GDAQ9Y2T3 454 aa19.19■□□□□ 0.66
PHGDH-229ENST00000641891 SHMT1P34896 483 aa19.18■□□□□ 0.66
PHGDH-229ENST00000641891 NAA30Q147X3 362 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms