RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 GRB14Q14449 540 aa20.37■□□□□ 0.85
PHGDH-227ENST00000641811 CCDC96Q2M329 555 aa20.37■□□□□ 0.85
PHGDH-227ENST00000641811 TTBK2Q6IQ55 1244 aa20.37■□□□□ 0.85
PHGDH-227ENST00000641811 STOX1Q6ZVD7 989 aa20.37■□□□□ 0.85
PHGDH-227ENST00000641811 CYB5R4Q7L1T6 521 aa20.37■□□□□ 0.85
PHGDH-227ENST00000641811 IQCA1Q86XH1 822 aa20.37■□□□□ 0.85
PHGDH-227ENST00000641811 RIOX2Q8IUF8 465 aa20.37■□□□□ 0.85
PHGDH-227ENST00000641811 CPXCR1Q8N123 301 aa20.37■□□□□ 0.85
PHGDH-227ENST00000641811 DCAF4Q8WV16 495 aa20.37■□□□□ 0.85
PHGDH-227ENST00000641811 ZSCAN10Q96SZ4 725 aaPredicted RBP20.37■□□□□ 0.85
PHGDH-227ENST00000641811 MROH8Q9H579 483 aa20.37■□□□□ 0.85
PHGDH-227ENST00000641811 SLC38A10Q9HBR0 1119 aa20.37■□□□□ 0.85
PHGDH-227ENST00000641811 RAVER2Q9HCJ3 691 aaKnown RBP20.37■□□□□ 0.85
PHGDH-227ENST00000641811 ANO2Q9NQ90 1003 aa20.37■□□□□ 0.85
PHGDH-227ENST00000641811 FRMPD2Q68DX3 1309 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-227ENST00000641811 E7EWF7 191 aa20.36■□□□□ 0.85
PHGDH-227ENST00000641811 SLC25A27O95847 323 aa20.36■□□□□ 0.85
PHGDH-227ENST00000641811 HMGCRP04035 888 aa20.36■□□□□ 0.85
PHGDH-227ENST00000641811 XRCC5P13010 732 aaKnown RBP20.36■□□□□ 0.85
PHGDH-227ENST00000641811 ADORA2AP29274 412 aa20.36■□□□□ 0.85
PHGDH-227ENST00000641811 SNAP25P60880 206 aa20.36■□□□□ 0.85
PHGDH-227ENST00000641811 SNRNP48Q6IEG0 339 aaKnown RBP20.36■□□□□ 0.85
PHGDH-227ENST00000641811 FAM160B2Q86V87 743 aa20.36■□□□□ 0.85
PHGDH-227ENST00000641811 DGKHQ86XP1 1220 aa20.36■□□□□ 0.85
PHGDH-227ENST00000641811 ENAHQ8N8S7 591 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-227ENST00000641811 NPLOC4Q8TAT6 608 aa20.36■□□□□ 0.85
PHGDH-227ENST00000641811 CHURC1Q8WUH1 139 aa20.36■□□□□ 0.85
PHGDH-227ENST00000641811 APBA2Q99767 749 aa20.36■□□□□ 0.85
PHGDH-227ENST00000641811 RNF208Q9H0X6 261 aa20.36■□□□□ 0.85
PHGDH-227ENST00000641811 GPCPD1Q9NPB8 672 aa20.36■□□□□ 0.85
PHGDH-227ENST00000641811 RIPK3Q9Y572 518 aa20.36■□□□□ 0.85
PHGDH-227ENST00000641811 CTDP1Q9Y5B0 961 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-227ENST00000641811 KIAA0100Q14667 2235 aaKnown RBP20.35■□□□□ 0.85
PHGDH-227ENST00000641811 TNKSO95271 1327 aa20.35■□□□□ 0.85
PHGDH-227ENST00000641811 STRNO43815 780 aa20.35■□□□□ 0.85
PHGDH-227ENST00000641811 ZKSCAN1P17029 563 aaPredicted RBP20.35■□□□□ 0.85
PHGDH-227ENST00000641811 SLC16A2P36021 539 aa20.35■□□□□ 0.85
PHGDH-227ENST00000641811 NT5C2P49902 561 aa20.35■□□□□ 0.85
PHGDH-227ENST00000641811 TEX13BQ9BXU2 312 aa20.35■□□□□ 0.85
PHGDH-227ENST00000641811 FLRT1Q9NZU1 646 aa20.35■□□□□ 0.85
PHGDH-227ENST00000641811 COBLO75128 1261 aa20.34■□□□□ 0.85
PHGDH-227ENST00000641811 PDHBP11177 359 aa20.34■□□□□ 0.85
PHGDH-227ENST00000641811 MLLT1Q03111 559 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-227ENST00000641811 TRDNQ13061 729 aa20.34■□□□□ 0.85
PHGDH-227ENST00000641811 CCDC178Q5BJE1 867 aa20.34■□□□□ 0.85
PHGDH-227ENST00000641811 ANKS1AQ92625 1134 aa20.34■□□□□ 0.85
PHGDH-227ENST00000641811 UBAC1Q9BSL1 405 aa20.34■□□□□ 0.85
PHGDH-227ENST00000641811 PRR12Q9ULL5 1215 aa20.34■□□□□ 0.85
PHGDH-227ENST00000641811 ATP2A1O14983 1001 aa20.33■□□□□ 0.85
PHGDH-227ENST00000641811 PLA2G6O60733 806 aa20.33■□□□□ 0.85
PHGDH-227ENST00000641811 HOXC6P09630 235 aa20.33■□□□□ 0.85
PHGDH-227ENST00000641811 FCER1AP12319 257 aa20.33■□□□□ 0.85
PHGDH-227ENST00000641811 CASC1Q6TDU7 716 aa20.33■□□□□ 0.85
PHGDH-227ENST00000641811 DPP9Q86TI2 863 aa20.33■□□□□ 0.85
PHGDH-227ENST00000641811 PNMA1Q8ND90 353 aa20.33■□□□□ 0.85
PHGDH-227ENST00000641811 KAT14Q9H8E8 782 aa20.33■□□□□ 0.85
PHGDH-227ENST00000641811 RBBP6Q7Z6E9 1792 aaKnown RBP20.33■□□□□ 0.84
PHGDH-227ENST00000641811 SLC27A2O14975 620 aa20.32■□□□□ 0.84
PHGDH-227ENST00000641811 PGK2P07205 417 aa20.32■□□□□ 0.84
PHGDH-227ENST00000641811 GJB1P08034 283 aa20.32■□□□□ 0.84
PHGDH-227ENST00000641811 GOLGA8HP0CJ92 632 aa20.32■□□□□ 0.84
PHGDH-227ENST00000641811 SNHG28P0DPA3 235 aa20.32■□□□□ 0.84
PHGDH-227ENST00000641811 CACNB2Q08289 660 aaPredicted RBP20.32■□□□□ 0.84
PHGDH-227ENST00000641811 ZNF543Q08ER8 600 aa20.32■□□□□ 0.84
PHGDH-227ENST00000641811 SEC23AQ15436 765 aa20.32■□□□□ 0.84
PHGDH-227ENST00000641811 CCDC174Q6PII3 467 aa20.32■□□□□ 0.84
PHGDH-227ENST00000641811 CHST3Q7LGC8 479 aa20.32■□□□□ 0.84
PHGDH-227ENST00000641811 RALYLQ86SE5 291 aaKnown RBP20.32■□□□□ 0.84
PHGDH-227ENST00000641811 TRMT44Q8IYL2 757 aaKnown RBP20.32■□□□□ 0.84
PHGDH-227ENST00000641811 ABRAQ8N0Z2 381 aa20.32■□□□□ 0.84
PHGDH-227ENST00000641811 NCOA7Q8NI08 942 aa20.32■□□□□ 0.84
PHGDH-227ENST00000641811 AGBL1Q96MI9 1066 aa20.32■□□□□ 0.84
PHGDH-227ENST00000641811 MMP19Q99542 508 aa20.32■□□□□ 0.84
PHGDH-227ENST00000641811 ZNF536O15090 1300 aa20.31■□□□□ 0.84
PHGDH-227ENST00000641811 PRKAR2AP13861 404 aaKnown RBP20.31■□□□□ 0.84
PHGDH-227ENST00000641811 COL9A3Q14050 684 aaPredicted RBP20.31■□□□□ 0.84
PHGDH-227ENST00000641811 NECTIN1Q15223 517 aa20.31■□□□□ 0.84
PHGDH-227ENST00000641811 CREB3L3Q68CJ9 461 aa20.31■□□□□ 0.84
PHGDH-227ENST00000641811 BTNL9Q6UXG8 535 aa20.31■□□□□ 0.84
PHGDH-227ENST00000641811 SHISA4Q96DD7 197 aa20.31■□□□□ 0.84
PHGDH-227ENST00000641811 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.31■□□□□ 0.845e-8■■□□□ 14.4
PHGDH-227ENST00000641811 HOMER2Q9NSB8 354 aa20.31■□□□□ 0.84
PHGDH-227ENST00000641811 ZNF236Q9UL36 1845 aa20.3■□□□□ 0.84
PHGDH-227ENST00000641811 FDX1P10109 184 aa20.3■□□□□ 0.84
PHGDH-227ENST00000641811 TAL1P17542 331 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-227ENST00000641811 COPB2P35606 906 aa20.3■□□□□ 0.84
PHGDH-227ENST00000641811 OAZ1P54368 228 aa20.3■□□□□ 0.84
PHGDH-227ENST00000641811 ANTXR2P58335 489 aa20.3■□□□□ 0.84
PHGDH-227ENST00000641811 KCTD2Q14681 263 aa20.3■□□□□ 0.84
PHGDH-227ENST00000641811 IFIT1BQ5T764 474 aaKnown RBP20.3■□□□□ 0.84
PHGDH-227ENST00000641811 MAP3K21Q5TCX8 1036 aa20.3■□□□□ 0.84
PHGDH-227ENST00000641811 SYDE2Q5VT97 1194 aa20.3■□□□□ 0.84
PHGDH-227ENST00000641811 DEFB118Q96PH6 123 aa20.3■□□□□ 0.84
PHGDH-227ENST00000641811 CPVLQ9H3G5 476 aa20.3■□□□□ 0.84
PHGDH-227ENST00000641811 SENP2Q9HC62 589 aa20.3■□□□□ 0.84
PHGDH-227ENST00000641811 PAK6Q9NQU5 681 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-227ENST00000641811 BRCA2P51587 3418 aa20.3■□□□□ 0.84
PHGDH-227ENST00000641811 RPTORQ8N122 1335 aa20.29■□□□□ 0.84
PHGDH-227ENST00000641811 IFIT3O14879 490 aaKnown RBP20.29■□□□□ 0.84
PHGDH-227ENST00000641811 CYP2C19P33261 490 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms