RNA–Protein interactions for RNA: ENST00000640958.1

SP3-208, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-208ENST00000640958 ASPRV1Q53RT3 343 aa23.23■■□□□ 1.31
SP3-208ENST00000640958 HOMER1Q86YM7 354 aa23.23■■□□□ 1.31
SP3-208ENST00000640958 ZFPM1Q8IX07 1006 aa23.23■■□□□ 1.31
SP3-208ENST00000640958 CCDC12Q8WUD4 166 aaPredicted RBP23.23■■□□□ 1.31
SP3-208ENST00000640958 PIGSQ96S52 555 aa23.23■■□□□ 1.31
SP3-208ENST00000640958 IFNKQ9P0W0 207 aa23.23■■□□□ 1.31
SP3-208ENST00000640958 E2F4Q16254 413 aa23.22■■□□□ 1.31
SP3-208ENST00000640958 AOC3Q16853 763 aa23.22■■□□□ 1.31
SP3-208ENST00000640958 PAGE5Q96GU1 130 aa23.22■■□□□ 1.31
SP3-208ENST00000640958 SEC63Q9UGP8 760 aaKnown RBP23.22■■□□□ 1.31
SP3-208ENST00000640958 FRMPD2Q68DX3 1309 aaPredicted RBP23.22■■□□□ 1.31
SP3-208ENST00000640958 TTLL1O95922 423 aa23.21■■□□□ 1.31
SP3-208ENST00000640958 EIF6P56537 245 aaKnown RBP23.21■■□□□ 1.31
SP3-208ENST00000640958 INF2Q27J81 1249 aa23.21■■□□□ 1.31
SP3-208ENST00000640958 MLKLQ8NB16 471 aa23.21■■□□□ 1.31
SP3-208ENST00000640958 CCDC34Q96HJ3 373 aa23.21■■□□□ 1.31
SP3-208ENST00000640958 UBA5Q9GZZ9 404 aa23.21■■□□□ 1.31
SP3-208ENST00000640958 DNAJC18Q9H819 358 aa23.21■■□□□ 1.31
SP3-208ENST00000640958 SMC2O95347 1197 aa23.21■■□□□ 1.31
SP3-208ENST00000640958 ATP1A3P13637 1013 aa23.21■■□□□ 1.31
SP3-208ENST00000640958 IDI2Q9BXS1 227 aa23.21■■□□□ 1.31
SP3-208ENST00000640958 LONP1P36776 959 aaKnown RBP23.2■■□□□ 1.3
SP3-208ENST00000640958 FANCCQ00597 558 aa23.2■■□□□ 1.3
SP3-208ENST00000640958 ESYT2A0FGR8 921 aa23.2■■□□□ 1.3
SP3-208ENST00000640958 CACNB3P54284 484 aa23.2■■□□□ 1.3
SP3-208ENST00000640958 CC2D2BQ6DHV5 1058 aa23.2■■□□□ 1.3
SP3-208ENST00000640958 LRRC8AQ8IWT6 810 aa23.2■■□□□ 1.3
SP3-208ENST00000640958 VAT1LQ9HCJ6 419 aa23.2■■□□□ 1.3
SP3-208ENST00000640958 C6orf50Q9HD87 102 aa23.2■■□□□ 1.3
SP3-208ENST00000640958 FAM198AQ9UFP1 575 aa23.2■■□□□ 1.3
SP3-208ENST00000640958 R3HCC1Q9Y3T6 440 aaKnown RBP23.2■■□□□ 1.3
SP3-208ENST00000640958 SMCO2A6NFE2 343 aa23.19■■□□□ 1.3
SP3-208ENST00000640958 hCG_1984214I3L0E3 225 aa23.19■■□□□ 1.3
SP3-208ENST00000640958 MYO1BO43795 1136 aa23.19■■□□□ 1.3
SP3-208ENST00000640958 SLURP2P0DP57 97 aa23.19■■□□□ 1.3
SP3-208ENST00000640958 AFMP43652 599 aa23.19■■□□□ 1.3
SP3-208ENST00000640958 DPYDQ12882 1025 aa23.19■■□□□ 1.3
SP3-208ENST00000640958 ARID5BQ14865 1188 aa23.19■■□□□ 1.3
SP3-208ENST00000640958 KRT25Q7Z3Z0 450 aa23.19■■□□□ 1.3
SP3-208ENST00000640958 ZNF713Q8N859 430 aaPredicted RBP23.19■■□□□ 1.3
SP3-208ENST00000640958 TMEM60Q9H2L4 133 aa23.19■■□□□ 1.3
SP3-208ENST00000640958 DACH1Q9UI36 760 aa23.19■■□□□ 1.3
SP3-208ENST00000640958 SERPINA10Q9UK55 444 aa23.19■■□□□ 1.3
SP3-208ENST00000640958 FILIP1Q7Z7B0 1213 aa23.18■■□□□ 1.3
SP3-208ENST00000640958 PYM1Q9BRP8 204 aaKnown RBP23.18■■□□□ 1.3
SP3-208ENST00000640958 DHX36Q9H2U1 1008 aaKnown RBP23.18■■□□□ 1.3
SP3-208ENST00000640958 IMPACTQ9P2X3 320 aa23.18■■□□□ 1.3
SP3-208ENST00000640958 NEMFO60524 1076 aa23.18■■□□□ 1.3
SP3-208ENST00000640958 NPM3O75607 178 aaKnown RBP23.18■■□□□ 1.3
SP3-208ENST00000640958 GNA11P29992 359 aa23.18■■□□□ 1.3
SP3-208ENST00000640958 TERF1P54274 439 aa23.18■■□□□ 1.3
SP3-208ENST00000640958 FMR1Q06787 632 aaKnown RBP eCLIP23.18■■□□□ 1.32e-6■■□□□ 12.9
SP3-208ENST00000640958 ZNF543Q08ER8 600 aa23.18■■□□□ 1.3
SP3-208ENST00000640958 PDXDC2PQ6P474 469 aa23.18■■□□□ 1.3
SP3-208ENST00000640958 CCDC17Q96LX7 622 aa23.18■■□□□ 1.3
SP3-208ENST00000640958 DDTLA6NHG4 134 aaPredicted RBP23.17■■□□□ 1.3
SP3-208ENST00000640958 SOGA3Q5TF21 947 aa23.17■■□□□ 1.3
SP3-208ENST00000640958 SH3BP5LQ7L8J4 393 aa23.17■■□□□ 1.3
SP3-208ENST00000640958 IQUBQ8NA54 791 aa23.17■■□□□ 1.3
SP3-208ENST00000640958 SUPT20HQ8NEM7 779 aa23.17■■□□□ 1.3
SP3-208ENST00000640958 FANCLQ9NW38 375 aa23.17■■□□□ 1.3
SP3-208ENST00000640958 CASP1P29466 404 aa23.17■■□□□ 1.3
SP3-208ENST00000640958 RBM5P52756 815 aaKnown RBP eCLIP23.17■■□□□ 1.3
SP3-208ENST00000640958 TCP10Q12799 353 aa23.17■■□□□ 1.3
SP3-208ENST00000640958 NONOQ15233 471 aaKnown RBP eCLIP23.17■■□□□ 1.3
SP3-208ENST00000640958 GSDMDP57764 484 aa23.16■■□□□ 1.3
SP3-208ENST00000640958 ENOX1Q8TC92 643 aaKnown RBP23.16■■□□□ 1.3
SP3-208ENST00000640958 PDGFDQ9GZP0 370 aaPredicted RBP23.16■■□□□ 1.3
SP3-208ENST00000640958 GPCPD1Q9NPB8 672 aa23.16■■□□□ 1.3
SP3-208ENST00000640958 ARFGEF1Q9Y6D6 1849 aa23.16■■□□□ 1.3
SP3-208ENST00000640958 YDJCA8MPS7 323 aa23.15■■□□□ 1.3
SP3-208ENST00000640958 LAD1O00515 517 aa23.15■■□□□ 1.3
SP3-208ENST00000640958 MPHOSPH10O00566 681 aaKnown RBP23.15■■□□□ 1.3
SP3-208ENST00000640958 DPF2Q92785 391 aa23.15■■□□□ 1.3
SP3-208ENST00000640958 GSDMAQ96QA5 445 aa23.15■■□□□ 1.3
SP3-208ENST00000640958 MED15Q96RN5 788 aa23.15■■□□□ 1.3
SP3-208ENST00000640958 PRPHP41219 470 aa23.15■■□□□ 1.3
SP3-208ENST00000640958 DTHD1Q6ZMT9 781 aa23.15■■□□□ 1.3
SP3-208ENST00000640958 TMC6Q7Z403 805 aa23.15■■□□□ 1.3
SP3-208ENST00000640958 FAM196BA6NMK8 535 aa23.14■■□□□ 1.3
SP3-208ENST00000640958 PPIP5K2O43314 1243 aa23.14■■□□□ 1.3
SP3-208ENST00000640958 C21orf2O43822 256 aa23.14■■□□□ 1.3
SP3-208ENST00000640958 CCZ1BP86790 482 aa23.14■■□□□ 1.3
SP3-208ENST00000640958 CCZ1P86791 482 aaPredicted RBP23.14■■□□□ 1.3
SP3-208ENST00000640958 PPP4R3BQ5MIZ7 849 aa23.14■■□□□ 1.3
SP3-208ENST00000640958 REXO1Q8N1G1 1221 aaKnown RBP23.14■■□□□ 1.3
SP3-208ENST00000640958 MTRQ99707 1265 aa23.14■■□□□ 1.3
SP3-208ENST00000640958 PI4KBQ9UBF8 816 aa23.14■■□□□ 1.3
SP3-208ENST00000640958 ZNF18P17022 549 aa23.14■■□□□ 1.29
SP3-208ENST00000640958 ERCC5P28715 1186 aaPredicted RBP23.14■■□□□ 1.29
SP3-208ENST00000640958 TXLNAP40222 546 aa23.14■■□□□ 1.29
SP3-208ENST00000640958 CT47A1Q5JQC4 288 aaPredicted RBP23.14■■□□□ 1.29
SP3-208ENST00000640958 JMJD4Q9H9V9 463 aa23.14■■□□□ 1.29
SP3-208ENST00000640958 CBFA2T2O43439 604 aa23.13■■□□□ 1.29
SP3-208ENST00000640958 UBASH3AP57075 661 aa23.13■■□□□ 1.29
SP3-208ENST00000640958 DNTTIP2Q5QJE6 756 aaKnown RBP23.13■■□□□ 1.29
SP3-208ENST00000640958 GPATCH4Q5T3I0 446 aaKnown RBP23.13■■□□□ 1.29
SP3-208ENST00000640958 NEK8Q86SG6 692 aa23.13■■□□□ 1.29
SP3-208ENST00000640958 TRMT44Q8IYL2 757 aaKnown RBP23.13■■□□□ 1.29
SP3-208ENST00000640958 COA7Q96BR5 231 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms