RNA–Protein interactions for RNA: ENST00000640736.1

RTTN-221, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,132 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-221ENST00000640736 ISY1Q9ULR0 285 aaKnown RBP16.38■□□□□ 0.21
RTTN-221ENST00000640736 TSPY2A6NKD2 308 aa16.37■□□□□ 0.21
RTTN-221ENST00000640736 CYBAP13498 195 aa16.37■□□□□ 0.21
RTTN-221ENST00000640736 SLC4A3P48751 1232 aa16.37■□□□□ 0.21
RTTN-221ENST00000640736 SLFN13Q68D06 897 aa16.37■□□□□ 0.21
RTTN-221ENST00000640736 PLEKHM2Q8IWE5 1019 aa16.37■□□□□ 0.21
RTTN-221ENST00000640736 C7orf61Q8IZ16 206 aa16.37■□□□□ 0.21
RTTN-221ENST00000640736 GMCL1P1Q8NEA9 526 aa16.37■□□□□ 0.21
RTTN-221ENST00000640736 KIFC2Q96AC6 838 aa16.37■□□□□ 0.21
RTTN-221ENST00000640736 CHMP4CQ96CF2 233 aa16.37■□□□□ 0.21
RTTN-221ENST00000640736 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.37■□□□□ 0.21
RTTN-221ENST00000640736 CTDP1Q9Y5B0 961 aaPredicted RBP16.37■□□□□ 0.21
RTTN-221ENST00000640736 IGHA2P01877 340 aa16.36■□□□□ 0.21
RTTN-221ENST00000640736 PGK2P07205 417 aa16.36■□□□□ 0.21
RTTN-221ENST00000640736 KCTD2Q14681 263 aa16.36■□□□□ 0.21
RTTN-221ENST00000640736 SNRNP48Q6IEG0 339 aaKnown RBP16.36■□□□□ 0.21
RTTN-221ENST00000640736 ZNF589Q86UQ0 364 aaPredicted RBP16.36■□□□□ 0.21
RTTN-221ENST00000640736 CPXCR1Q8N123 301 aa16.36■□□□□ 0.21
RTTN-221ENST00000640736 PRPF38AQ8NAV1 312 aaKnown RBP16.36■□□□□ 0.21
RTTN-221ENST00000640736 MAML3Q96JK9 1138 aa16.36■□□□□ 0.21
RTTN-221ENST00000640736 TOMM22Q9NS69 142 aa16.36■□□□□ 0.21
RTTN-221ENST00000640736 SYNPO2Q9UMS6 1093 aa16.36■□□□□ 0.21
RTTN-221ENST00000640736 STX8Q9UNK0 236 aa16.36■□□□□ 0.21
RTTN-221ENST00000640736 TACC3Q9Y6A5 838 aa16.36■□□□□ 0.21
RTTN-221ENST00000640736 PFASO15067 1338 aa16.36■□□□□ 0.21
RTTN-221ENST00000640736 SMCHD1A6NHR9 2005 aa16.35■□□□□ 0.21
RTTN-221ENST00000640736 RANBP6O60518 1105 aaKnown RBP16.35■□□□□ 0.21
RTTN-221ENST00000640736 NMT2O60551 498 aa16.35■□□□□ 0.21
RTTN-221ENST00000640736 MSCO60682 206 aa16.35■□□□□ 0.21
RTTN-221ENST00000640736 ZBED4O75132 1171 aa16.35■□□□□ 0.21
RTTN-221ENST00000640736 FGAP02671 866 aa16.35■□□□□ 0.21
RTTN-221ENST00000640736 BMP3P12645 472 aa16.35■□□□□ 0.21
RTTN-221ENST00000640736 COPB2P35606 906 aa16.35■□□□□ 0.21
RTTN-221ENST00000640736 ALX1Q15699 326 aa16.35■□□□□ 0.21
RTTN-221ENST00000640736 PRAMEF19Q5SWL8 479 aa16.35■□□□□ 0.21
RTTN-221ENST00000640736 ANO1Q5XXA6 986 aa16.35■□□□□ 0.21
RTTN-221ENST00000640736 TEX13BQ9BXU2 312 aa16.35■□□□□ 0.21
RTTN-221ENST00000640736 RBM27Q9P2N5 1060 aaKnown RBP16.35■□□□□ 0.21
RTTN-221ENST00000640736 ANAPC4Q9UJX5 808 aa16.35■□□□□ 0.21
RTTN-221ENST00000640736 FEM1BQ9UK73 627 aa16.35■□□□□ 0.21
RTTN-221ENST00000640736 ZMYND8Q9ULU4 1186 aaPredicted RBP16.35■□□□□ 0.21
RTTN-221ENST00000640736 CCDC171Q6TFL3 1326 aa16.35■□□□□ 0.21
RTTN-221ENST00000640736 TRIOBPQ9H2D6 2365 aa16.35■□□□□ 0.21
RTTN-221ENST00000640736 HSPD1P10809 573 aaKnown RBP16.34■□□□□ 0.21
RTTN-221ENST00000640736 COL6A1P12109 1028 aa16.34■□□□□ 0.21
RTTN-221ENST00000640736 SDSP20132 328 aa16.34■□□□□ 0.21
RTTN-221ENST00000640736 IRX6P78412 446 aaPredicted RBP16.34■□□□□ 0.21
RTTN-221ENST00000640736 RRP12Q5JTH9 1297 aaKnown RBP16.34■□□□□ 0.21
RTTN-221ENST00000640736 RAVER2Q9HCJ3 691 aaKnown RBP16.34■□□□□ 0.21
RTTN-221ENST00000640736 IL17RBQ9NRM6 502 aa16.34■□□□□ 0.21
RTTN-221ENST00000640736 MTMR7Q9Y216 660 aa16.34■□□□□ 0.21
RTTN-221ENST00000640736 RIPK3Q9Y572 518 aa16.34■□□□□ 0.21
RTTN-221ENST00000640736 TMEM232C9JQI7 657 aa16.33■□□□□ 0.2
RTTN-221ENST00000640736 MCCP23508 829 aa16.33■□□□□ 0.2
RTTN-221ENST00000640736 SLC1A4P43007 532 aa16.33■□□□□ 0.2
RTTN-221ENST00000640736 FXR1P51114 621 aaKnown RBP eCLIP16.33■□□□□ 0.2
RTTN-221ENST00000640736 HAND2P61296 217 aa16.33■□□□□ 0.2
RTTN-221ENST00000640736 PPP4R3BQ5MIZ7 849 aa16.33■□□□□ 0.2
RTTN-221ENST00000640736 TICAM2Q86XR7 235 aa16.33■□□□□ 0.2
RTTN-221ENST00000640736 OSBPL3Q9H4L5 887 aa16.33■□□□□ 0.2
RTTN-221ENST00000640736 SLC38A10Q9HBR0 1119 aa16.33■□□□□ 0.2
RTTN-221ENST00000640736 SEPT4O43236 478 aa16.32■□□□□ 0.2
RTTN-221ENST00000640736 ORC4O43929 436 aa16.32■□□□□ 0.2
RTTN-221ENST00000640736 SYN1P17600 705 aa16.32■□□□□ 0.2
RTTN-221ENST00000640736 IKQ13123 557 aaPredicted RBP16.32■□□□□ 0.2
RTTN-221ENST00000640736 LRRC26Q2I0M4 334 aa16.32■□□□□ 0.2
RTTN-221ENST00000640736 ZNF792Q3KQV3 632 aa16.32■□□□□ 0.2
RTTN-221ENST00000640736 GJC2Q5T442 439 aaPredicted RBP16.32■□□□□ 0.2
RTTN-221ENST00000640736 RASGRP2Q7LDG7 609 aa16.32■□□□□ 0.2
RTTN-221ENST00000640736 DDX11Q96FC9 970 aa16.32■□□□□ 0.2
RTTN-221ENST00000640736 TINF2Q9BSI4 451 aa16.32■□□□□ 0.2
RTTN-221ENST00000640736 SENP6Q9GZR1 1112 aaPredicted RBP16.32■□□□□ 0.2
RTTN-221ENST00000640736 MCM3APO60318 1980 aa16.31■□□□□ 0.2
RTTN-221ENST00000640736 ZMYM6O95789 1325 aa16.31■□□□□ 0.2
RTTN-221ENST00000640736 ATP2A1O14983 1001 aa16.31■□□□□ 0.2
RTTN-221ENST00000640736 FGRP09769 529 aa16.31■□□□□ 0.2
RTTN-221ENST00000640736 STAT2P52630 851 aa16.31■□□□□ 0.2
RTTN-221ENST00000640736 MFAP1P55081 439 aaKnown RBP16.31■□□□□ 0.2
RTTN-221ENST00000640736 CWC27Q6UX04 472 aaKnown RBP16.31■□□□□ 0.2
RTTN-221ENST00000640736 KCTD1Q719H9 257 aa16.31■□□□□ 0.2
RTTN-221ENST00000640736 GMCL1Q96IK5 515 aa16.31■□□□□ 0.2
RTTN-221ENST00000640736 DIAPH3Q9NSV4 1193 aa16.31■□□□□ 0.2
RTTN-221ENST00000640736 DIS3Q9Y2L1 958 aaKnown RBP16.31■□□□□ 0.2
RTTN-221ENST00000640736 LAMA4Q16363 1823 aa16.31■□□□□ 0.2
RTTN-221ENST00000640736 DNM1LO00429 736 aa16.3■□□□□ 0.2
RTTN-221ENST00000640736 FAM160B2Q86V87 743 aa16.3■□□□□ 0.2
RTTN-221ENST00000640736 CHURC1Q8WUH1 139 aa16.3■□□□□ 0.2
RTTN-221ENST00000640736 STAG1Q8WVM7 1258 aa16.3■□□□□ 0.2
RTTN-221ENST00000640736 PRO3102Q9H379 93 aa16.3■□□□□ 0.2
RTTN-221ENST00000640736 HOMER2Q9NSB8 354 aa16.3■□□□□ 0.2
RTTN-221ENST00000640736 PCDH10Q9P2E7 1040 aa16.3■□□□□ 0.2
RTTN-221ENST00000640736 TAL1P17542 331 aaPredicted RBP16.29■□□□□ 0.2
RTTN-221ENST00000640736 ATN1P54259 1190 aaPredicted RBP16.29■□□□□ 0.2
RTTN-221ENST00000640736 OAZ1P54368 228 aa16.29■□□□□ 0.2
RTTN-221ENST00000640736 SNAP25P60880 206 aa16.29■□□□□ 0.2
RTTN-221ENST00000640736 CCDC96Q2M329 555 aa16.29■□□□□ 0.2
RTTN-221ENST00000640736 RCSD1Q6JBY9 416 aa16.29■□□□□ 0.2
RTTN-221ENST00000640736 TBC1D10CQ8IV04 446 aa16.29■□□□□ 0.2
RTTN-221ENST00000640736 ANKRD35Q8N283 1001 aa16.29■□□□□ 0.2
RTTN-221ENST00000640736 ARRDC4Q8NCT1 418 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms