RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 SAMD1Q6SPF0 538 aaPredicted RBP10.15□□□□□ -0.78
HLA-B-258ENST00000640615 HOMER1Q86YM7 354 aa10.15□□□□□ -0.78
HLA-B-258ENST00000640615 RRP36Q96EU6 259 aaKnown RBP10.15□□□□□ -0.78
HLA-B-258ENST00000640615 ALG1Q9BT22 464 aa10.15□□□□□ -0.78
HLA-B-258ENST00000640615 SPZ1Q9BXG8 430 aa10.15□□□□□ -0.78
HLA-B-258ENST00000640615 CHMP5Q9NZZ3 219 aa10.15□□□□□ -0.78
HLA-B-258ENST00000640615 RBM27Q9P2N5 1060 aaKnown RBP10.15□□□□□ -0.78
HLA-B-258ENST00000640615 VPS37CA5D8V6 355 aaPredicted RBP10.14□□□□□ -0.79
HLA-B-258ENST00000640615 H3BQV1 296 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 CXCL11O14625 94 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 IRF6O14896 467 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 STX6O43752 255 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 VCAM1P19320 739 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 STAT2P52630 851 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 HUNKP57058 714 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 NUCB2P80303 420 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 MAP2K1Q02750 393 aaPredicted RBP10.14□□□□□ -0.79
HLA-B-258ENST00000640615 TRIM29Q14134 588 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 PKN1Q16512 942 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 SH3D19Q5HYK7 790 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 FOXD4L5Q5VV16 416 aaPredicted RBP10.14□□□□□ -0.79
HLA-B-258ENST00000640615 BTNL9Q6UXG8 535 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 FAM160B2Q86V87 743 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 ADGRF4Q8IZF3 695 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 CHURC1Q8WUH1 139 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 FOXD4L4Q8WXT5 416 aaPredicted RBP10.14□□□□□ -0.79
HLA-B-258ENST00000640615 C8orf76Q96K31 380 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 C12orf42Q96LP6 360 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 AIFM3Q96NN9 605 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 PIGSQ96S52 555 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 TANGO6Q9C0B7 1094 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 RPAP3Q9H6T3 665 aaPredicted RBP10.14□□□□□ -0.79
HLA-B-258ENST00000640615 RIOX1Q9H6W3 641 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 JMJD4Q9H9V9 463 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 SEC63Q9UGP8 760 aaKnown RBP10.14□□□□□ -0.79
HLA-B-258ENST00000640615 FEM1BQ9UK73 627 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 CIZ1Q9ULV3 898 aaPredicted RBP10.14□□□□□ -0.79
HLA-B-258ENST00000640615 DOCK1Q14185 1865 aa10.14□□□□□ -0.79
HLA-B-258ENST00000640615 PLA2G6O60733 806 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 SCG2P13521 617 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 GJA5P36382 358 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 LBX1P52954 281 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 SNAP25P60880 206 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 GUCY1B3Q02153 619 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 MKRN3Q13064 507 aaKnown RBP10.13□□□□□ -0.79
HLA-B-258ENST00000640615 PKP1Q13835 747 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 PFKFB3Q16875 520 aaPredicted RBP10.13□□□□□ -0.79
HLA-B-258ENST00000640615 OTUD7BQ6GQQ9 843 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 GADL1Q6ZQY3 521 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 HEATR3Q7Z4Q2 680 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 KIFC2Q96AC6 838 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 WNK4Q96J92 1243 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 HHIPL1Q96JK4 782 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 SLF1Q9BQI6 1058 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 GJB4Q9NTQ9 266 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 FBXO28Q9NVF7 368 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 PRR12Q9ULL5 1215 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 KCNH4Q9UQ05 1017 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 TLL2Q9Y6L7 1015 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 PAPPA2Q9BXP8 1791 aa10.13□□□□□ -0.79
HLA-B-258ENST00000640615 ATAD5Q96QE3 1844 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 A0A0G2JLL6 359 aaPredicted RBP10.12□□□□□ -0.79
HLA-B-258ENST00000640615 PNMA6FA0A0J9YX94 578 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 USP17L15C9J2P7 530 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 USP17L13C9JLJ4 530 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 USP17L11C9JVI0 530 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 USP17L18D6R9N7 530 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 USP17L22D6RA61 530 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 USP17L17D6RBQ6 530 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 USP17L19D6RCP7 530 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 USP17L20D6RJB6 530 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 FLOT1O75955 427 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 PDIA4P13667 645 aaKnown RBP10.12□□□□□ -0.79
HLA-B-258ENST00000640615 XBP1P17861 261 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 ZNF157P51786 506 aaPredicted RBP10.12□□□□□ -0.79
HLA-B-258ENST00000640615 USP17L24Q0WX57 530 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 SNAPC2Q13487 334 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 CDC37Q16543 378 aaPredicted RBP10.12□□□□□ -0.79
HLA-B-258ENST00000640615 PRRT2Q7Z6L0 340 aaPredicted RBP10.12□□□□□ -0.79
HLA-B-258ENST00000640615 GPKOWQ92917 476 aaPredicted RBP eCLIP10.12□□□□□ -0.79
HLA-B-258ENST00000640615 VPS54Q9P1Q0 977 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 ABT1Q9ULW3 272 aaKnown RBP10.12□□□□□ -0.79
HLA-B-258ENST00000640615 MTMR6Q9Y217 621 aa10.12□□□□□ -0.79
HLA-B-258ENST00000640615 MYH4Q9Y623 1939 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 ZBTB5O15062 677 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 BRD1O95696 1058 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 ZSCAN22P10073 491 aaPredicted RBP10.11□□□□□ -0.79
HLA-B-258ENST00000640615 MAP2K2P36507 400 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 GTF2A2P52657 109 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 QRICH1Q2TAL8 776 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 TREML2Q5T2D2 321 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 SPRYD7Q5W111 196 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 KRT40Q6A162 431 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 WWC2Q6AWC2 1192 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 MCTP1Q6DN14 999 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 RGMBQ6NW40 437 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 CCDC174Q6PII3 467 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 CATSPERGQ6ZRH7 1159 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 FASTKD5Q7L8L6 764 aaKnown RBP10.11□□□□□ -0.79
HLA-B-258ENST00000640615 SAPCD2Q86UD0 394 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms