RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 YY1AP1Q9H869 796 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 MTMR7Q9Y216 660 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 CEP83Q9Y592 693 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 ZHX2Q9Y6X8 837 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 TAF1LQ8IZX4 1826 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 MAP2K1Q02750 393 aaPredicted RBP6.39□□□□□ -1.39
RTTN-218ENST00000640408 NBPF9Q3BBW0 867 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 CCDC181Q5TID7 509 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 RGMBQ6NW40 437 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 PPFIBP1Q86W92 1011 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 MCF2L2Q86YR7 1114 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 CCDC47Q96A33 483 aaKnown RBP6.39□□□□□ -1.39
RTTN-218ENST00000640408 SDF4Q9BRK5 362 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 TANGO6Q9C0B7 1094 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 ZFYVE28Q9HCC9 887 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 NMRK2Q9NPI5 230 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 DACH1Q9UI36 760 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 NDUFB9Q9Y6M9 179 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 ARFGEF2Q9Y6D5 1785 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 NUP188Q5SRE5 1749 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 SALL3Q9BXA9 1300 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 KLF18A0A0U1RQI7 1052 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 KIF3CO14782 793 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 SLC27A2O14975 620 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 WDR46O15213 610 aaKnown RBP6.39□□□□□ -1.39
RTTN-218ENST00000640408 FIBPO43427 364 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 SERPINC1P01008 464 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 BMP3P12645 472 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 GSPT1P15170 499 aaKnown RBP6.39□□□□□ -1.39
RTTN-218ENST00000640408 CCDC38Q502W7 563 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 DNAJC21Q5F1R6 531 aaKnown RBP6.39□□□□□ -1.39
RTTN-218ENST00000640408 C16orf86Q6ZW13 317 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 JMYQ8N9B5 988 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 MRPL11Q9Y3B7 192 aaKnown RBP6.39□□□□□ -1.39
RTTN-218ENST00000640408 GH2P01242 217 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 SSRP1Q08945 709 aaKnown RBP6.39□□□□□ -1.39
RTTN-218ENST00000640408 TSGA10IPQ3SY00 556 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 ICE2Q659A1 982 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 SPECC1LQ69YQ0 1117 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 GADL1Q6ZQY3 521 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 CCDC121Q6ZUS5 278 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 B4GALNT4Q76KP1 1039 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 CCDC150Q8NCX0 1101 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 ZNF396Q96N95 335 aaPredicted RBP6.39□□□□□ -1.39
RTTN-218ENST00000640408 ZSCAN10Q96SZ4 725 aaPredicted RBP6.39□□□□□ -1.39
RTTN-218ENST00000640408 B4E1Z4 1266 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 KIF5CO60282 957 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 BMP15O95972 392 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 ZBTB48P10074 688 aaPredicted RBP6.39□□□□□ -1.39
RTTN-218ENST00000640408 ERCC3P19447 782 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 CAP2P40123 477 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 APLP1P51693 650 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 PPP2R5AQ15172 486 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 PNMA1Q8ND90 353 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 RASSF8Q8NHQ8 419 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 USP26Q9BXU7 913 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 CFAP45Q9UL16 551 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 RABGAP1Q9Y3P9 1069 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.39□□□□□ -1.39
RTTN-218ENST00000640408 KRT85P78386 507 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 SPP2Q13103 211 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 TKFCQ3LXA3 575 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 SAMD3Q8N6K7 520 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 GLIS2Q9BZE0 524 aaPredicted RBP6.38□□□□□ -1.39
RTTN-218ENST00000640408 C6orf50Q9HD87 102 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 ZCCHC17Q9NP64 241 aaKnown RBP6.38□□□□□ -1.39
RTTN-218ENST00000640408 E7EWF7 191 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 BAG4O95429 457 aaKnown RBP6.38□□□□□ -1.39
RTTN-218ENST00000640408 CCDC129Q6ZRS4 1044 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 PRPF38AQ8NAV1 312 aaKnown RBP6.38□□□□□ -1.39
RTTN-218ENST00000640408 BRF1Q92994 677 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 LLPHQ9BRT6 129 aaKnown RBP6.38□□□□□ -1.39
RTTN-218ENST00000640408 WDR18Q9BV38 432 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 MAF1Q9H063 256 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 ZBTB21Q9ULJ3 1066 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 CAVIN2O95810 425 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 CACNB3P54284 484 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 PPIL2Q13356 520 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 SH2D4BQ5SQS7 431 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 GALNT17Q6IS24 598 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 CCDC83Q8IWF9 413 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 GOLGA5Q8TBA6 731 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 PIBF1Q8WXW3 757 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 MAP3K14Q99558 947 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 RAB34Q9BZG1 259 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 VPS18Q9P253 973 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 ADD3Q9UEY8 706 aaKnown RBP6.38□□□□□ -1.39
RTTN-218ENST00000640408 MYPNQ86TC9 1320 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 A6NNZ2 444 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 PRDM1O75626 825 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 FLOT1O75955 427 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 FOSP01100 380 aaPredicted RBP6.38□□□□□ -1.39
RTTN-218ENST00000640408 RHBDL3P58872 404 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 TUBB8Q3ZCM7 444 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 MICU3Q86XE3 530 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 ZNF274Q96GC6 653 aaPredicted RBP6.38□□□□□ -1.39
RTTN-218ENST00000640408 HHIPL1Q96JK4 782 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 FEM1BQ9UK73 627 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 TNKSO95271 1327 aa6.38□□□□□ -1.39
RTTN-218ENST00000640408 AFDNP55196 1824 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms