RNA–Protein interactions for RNA: ENST00000640099.1

NECAP1-224, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,313 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-224ENST00000640099 PCDHA6Q9UN73 950 aa8.66□□□□□ -1.02
NECAP1-224ENST00000640099 PCDHA4Q9UN74 947 aa8.66□□□□□ -1.02
NECAP1-224ENST00000640099 TFR2Q9UP52 801 aa8.66□□□□□ -1.02
NECAP1-224ENST00000640099 PCDHA8Q9Y5H6 950 aa8.66□□□□□ -1.02
NECAP1-224ENST00000640099 CCNT1O60563 726 aaKnown RBP8.66□□□□□ -1.02
NECAP1-224ENST00000640099 RASA1P20936 1047 aa8.66□□□□□ -1.02
NECAP1-224ENST00000640099 VPS72Q15906 364 aa8.66□□□□□ -1.02
NECAP1-224ENST00000640099 FILIP1LQ4L180 1135 aa8.66□□□□□ -1.02
NECAP1-224ENST00000640099 SBK1Q52WX2 424 aa8.66□□□□□ -1.02
NECAP1-224ENST00000640099 MEX3CQ5U5Q3 659 aaKnown RBP8.66□□□□□ -1.02
NECAP1-224ENST00000640099 LRRC47Q8N1G4 583 aaKnown RBP8.66□□□□□ -1.02
NECAP1-224ENST00000640099 LRRC15Q8TF66 581 aa8.66□□□□□ -1.02
NECAP1-224ENST00000640099 GSDMAQ96QA5 445 aa8.66□□□□□ -1.02
NECAP1-224ENST00000640099 L2HGDHQ9H9P8 463 aa8.66□□□□□ -1.02
NECAP1-224ENST00000640099 ZNF446Q9NWS9 450 aa8.66□□□□□ -1.02
NECAP1-224ENST00000640099 TMEM260Q9NX78 707 aa8.66□□□□□ -1.02
NECAP1-224ENST00000640099 PUF60Q9UHX1 559 aaKnown RBP8.66□□□□□ -1.02
NECAP1-224ENST00000640099 PARP3Q9Y6F1 533 aa8.66□□□□□ -1.02
NECAP1-224ENST00000640099 TXLNAP40222 546 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 CDK8P49336 464 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 GTF2IP78347 998 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 PAK1Q13153 545 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 CCDC93Q567U6 631 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 GJA10Q969M2 543 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 CD209Q9NNX6 404 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 STX10O60499 249 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 BMP15O95972 392 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 GYPCP04921 128 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 CALML3P27482 149 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 CLCN6P51797 869 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 COA7Q96BR5 231 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 CEP95Q96GE4 821 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 PIGSQ96S52 555 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 GPCPD1Q9NPB8 672 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 OGFRQ9NZT2 677 aa8.65□□□□□ -1.02
NECAP1-224ENST00000640099 MKRN1Q9UHC7 482 aaKnown RBP8.65□□□□□ -1.02
NECAP1-224ENST00000640099 DDX41Q9UJV9 622 aaKnown RBP8.65□□□□□ -1.02
NECAP1-224ENST00000640099 USP17L5A8MUK1 530 aa8.65□□□□□ -1.03
NECAP1-224ENST00000640099 KCNJ18B7U540 433 aa8.65□□□□□ -1.03
NECAP1-224ENST00000640099 STXBP3O00186 592 aa8.65□□□□□ -1.03
NECAP1-224ENST00000640099 CCP110O43303 1012 aa8.65□□□□□ -1.03
NECAP1-224ENST00000640099 PCP11498 1178 aaKnown RBP8.65□□□□□ -1.03
NECAP1-224ENST00000640099 TECP42680 631 aa8.65□□□□□ -1.03
NECAP1-224ENST00000640099 SCNN1DP51172 638 aa8.65□□□□□ -1.03
NECAP1-224ENST00000640099 UBXN1Q04323 297 aa8.65□□□□□ -1.03
NECAP1-224ENST00000640099 KCNJ12Q14500 433 aa8.65□□□□□ -1.03
NECAP1-224ENST00000640099 GRM4Q14833 912 aa8.65□□□□□ -1.03
NECAP1-224ENST00000640099 CCDC178Q5BJE1 867 aa8.65□□□□□ -1.03
NECAP1-224ENST00000640099 RC3H1Q5TC82 1133 aaKnown RBP8.65□□□□□ -1.03
NECAP1-224ENST00000640099 SMAP1Q8IYB5 467 aaPredicted RBP8.65□□□□□ -1.03
NECAP1-224ENST00000640099 C4orf32Q8N8J7 132 aa8.65□□□□□ -1.03
NECAP1-224ENST00000640099 SLF1Q9BQI6 1058 aa8.65□□□□□ -1.03
NECAP1-224ENST00000640099 RTFDC1Q9BY42 306 aaPredicted RBP8.65□□□□□ -1.03
NECAP1-224ENST00000640099 KCND1Q9NSA2 647 aa8.65□□□□□ -1.03
NECAP1-224ENST00000640099 ZNF219Q9P2Y4 722 aaPredicted RBP8.65□□□□□ -1.03
NECAP1-224ENST00000640099 AHDC1Q5TGY3 1603 aaPredicted RBP8.65□□□□□ -1.03
NECAP1-224ENST00000640099 SMCO2A6NFE2 343 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 GTPBP6O43824 516 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-224ENST00000640099 COPB1P53618 953 aaKnown RBP8.64□□□□□ -1.03
NECAP1-224ENST00000640099 SYCP1Q15431 976 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 ZNF569Q5MCW4 686 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 CDKAL1Q5VV42 579 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 DGKHQ86XP1 1220 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 DISC1Q9NRI5 854 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 POLLQ9UGP5 575 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 GGA1Q9UJY5 639 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 SERPINB2P05120 415 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 CCDC175P0C221 793 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 TXKP42681 527 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 TXNRD1Q16881 649 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 DOK7Q18PE1 504 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 NAALADL2Q58DX5 795 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 ELOA2Q8IYF1 753 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-224ENST00000640099 TRIM47Q96LD4 638 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 SRRTQ9BXP5 876 aaKnown RBP8.64□□□□□ -1.03
NECAP1-224ENST00000640099 TRIM10Q9UDY6 481 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 PHLPP2Q6ZVD8 1323 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 NKRFO15226 690 aaKnown RBP eCLIP8.64□□□□□ -1.03
NECAP1-224ENST00000640099 MFAP3LO75121 409 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 PARP1P09874 1014 aaKnown RBP8.64□□□□□ -1.03
NECAP1-224ENST00000640099 PLCG1P19174 1290 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 KRT9P35527 623 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 PPP2R3AQ06190 1150 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 ZNF771Q7L3S4 317 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-224ENST00000640099 PCMTD1Q96MG8 357 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-224ENST00000640099 CHP1Q99653 195 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 RNF216Q9NWF9 866 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-224ENST00000640099 LEMD3Q9Y2U8 911 aa8.64□□□□□ -1.03
NECAP1-224ENST00000640099 IRS2Q9Y4H2 1338 aa8.63□□□□□ -1.03
NECAP1-224ENST00000640099 FAM196BA6NMK8 535 aa8.63□□□□□ -1.03
NECAP1-224ENST00000640099 MPHOSPH10O00566 681 aaKnown RBP8.63□□□□□ -1.03
NECAP1-224ENST00000640099 FCER1AP12319 257 aa8.63□□□□□ -1.03
NECAP1-224ENST00000640099 KCNJ6P48051 423 aa8.63□□□□□ -1.03
NECAP1-224ENST00000640099 KLK7P49862 253 aa8.63□□□□□ -1.03
NECAP1-224ENST00000640099 ERVK-24P63145 666 aa8.63□□□□□ -1.03
NECAP1-224ENST00000640099 GSTO1P78417 241 aa8.63□□□□□ -1.03
NECAP1-224ENST00000640099 FEZ1Q99689 392 aa8.63□□□□□ -1.03
NECAP1-224ENST00000640099 BARHL2Q9NY43 387 aa8.63□□□□□ -1.03
NECAP1-224ENST00000640099 ADGRG1Q9Y653 693 aa8.63□□□□□ -1.03
NECAP1-224ENST00000640099 FLT1P17948 1338 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms