RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 HELLSQ9NRZ9 838 aa5.59□□□□□ -1.52
SCN1A-218ENST00000640036 AGLP35573 1532 aa5.59□□□□□ -1.52
SCN1A-218ENST00000640036 RPLP2P05387 115 aaKnown RBP5.58□□□□□ -1.52
SCN1A-218ENST00000640036 CIITAP33076 1130 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 FKBP1BP68106 108 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 MLLT1Q03111 559 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-218ENST00000640036 NR1H3Q13133 447 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 ASPRV1Q53RT3 343 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 PHKBQ93100 1093 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 SLC28A3Q9HAS3 691 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 ENTPD7Q9NQZ7 604 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 ODF2LQ9ULJ1 636 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 PCDHB12Q9Y5F1 795 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 ADCY9O60503 1353 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 DIP2BQ9P265 1576 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 MADDQ8WXG6 1647 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 CARNS1A5YM72 827 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 GH2P01242 217 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 FERP16591 822 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 CCDC15Q0P6D6 951 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 BTBD8Q5XKL5 378 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 CDCA7LQ96GN5 454 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 FAM167AQ96KS9 214 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 SLF1Q9BQI6 1058 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 CCDC94Q9BW85 323 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-218ENST00000640036 DYRK4Q9NR20 520 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 TTC41PQ6P2S7 1318 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 ZNF532Q9HCE3 1301 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 ZNF233A6NK53 670 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 CDC42EP1Q00587 391 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 DMP1Q13316 513 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-218ENST00000640036 SNRNP48Q6IEG0 339 aaKnown RBP5.58□□□□□ -1.52
SCN1A-218ENST00000640036 TMED8Q6PL24 325 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-218ENST00000640036 KRT25Q7Z3Z0 450 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 LUZP1Q86V48 1076 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 PLA2G4DQ86XP0 818 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 ZKSCAN3Q9BRR0 538 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 UBE2OQ9C0C9 1292 aaKnown RBP5.58□□□□□ -1.52
SCN1A-218ENST00000640036 MIS12Q9H081 205 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 TNMDQ9H2S6 317 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 ZBTB12Q9Y330 459 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-218ENST00000640036 SHROOM2Q13796 1616 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 SYNMO15061 1565 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 CACNA1GO43497 2377 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 PRDM1O75626 825 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 PSMC4P43686 418 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 SAMD7Q7Z3H4 446 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 ADAT2Q7Z6V5 191 aaKnown RBP5.58□□□□□ -1.52
SCN1A-218ENST00000640036 NDUFAF2Q8N183 169 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 PGBD4Q96DM1 585 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 ZNF830Q96NB3 372 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-218ENST00000640036 MEIS3Q99687 375 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 CCDC77Q9BR77 488 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 SSH2Q76I76 1423 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 MAP1BP46821 2468 aaKnown RBP5.58□□□□□ -1.52
SCN1A-218ENST00000640036 ARHGEF5Q12774 1597 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 NEMP1O14524 444 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 CCNT1O60563 726 aaKnown RBP5.58□□□□□ -1.52
SCN1A-218ENST00000640036 CD19P15391 556 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 ZNF18P17022 549 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 TPH2Q8IWU9 490 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 FEM1BQ9UK73 627 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 SLC4A7Q9Y6M7 1214 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 STK10O94804 968 aaKnown RBP5.58□□□□□ -1.52
SCN1A-218ENST00000640036 TNNI1P19237 187 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 IL13P35225 146 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 TNNI3KQ59H18 835 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 SUSD4Q5VX71 490 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 PRR5LQ6MZQ0 368 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 C8orf58Q8NAV2 365 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 SNX25Q9H3E2 840 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 PREX2Q70Z35 1606 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 GOLGA6L9A6NEM1 432 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 PSMD14O00487 310 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 ZMYND10O75800 440 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 CEP57Q86XR8 500 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 RNF139Q8WU17 664 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 EDC3Q96F86 508 aaKnown RBP5.58□□□□□ -1.52
SCN1A-218ENST00000640036 ACAD9Q9H845 621 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 TOPORSQ9NS56 1045 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-218ENST00000640036 SDK1Q7Z5N4 2213 aa5.58□□□□□ -1.52
SCN1A-218ENST00000640036 MYH10P35580 1976 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 TMEM191BP0C7N4 346 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 KRT5P13647 590 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 SLFN5Q08AF3 891 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 SEPT6Q14141 434 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 IFI16Q16666 785 aaKnown RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 FAM102BQ5T8I3 360 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 GIMAP7Q8NHV1 300 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 TCP11Q8WWU5 503 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 PPP1R9BQ96SB3 815 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 SENP6Q9GZR1 1112 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 PRAG1Q86YV5 1406 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 PI4K2BG5E9Z4 385 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 HOXA2O43364 376 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 KPNA6O60684 536 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 EPB41P11171 864 aaKnown RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 PRMT2P55345 433 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 CCDC102BQ68D86 513 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 C4orf50Q6ZRC1 276 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms