RNA–Protein interactions for RNA: ENST00000639811.1

NECAP1-219, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-219ENST00000639811 HLA-DOAP06340 250 aa11.19□□□□□ -0.62
NECAP1-219ENST00000639811 SLFN14P0C7P3 912 aa11.19□□□□□ -0.62
NECAP1-219ENST00000639811 LMOD1P29536 600 aaPredicted RBP11.19□□□□□ -0.62
NECAP1-219ENST00000639811 NAPAP54920 295 aa11.19□□□□□ -0.62
NECAP1-219ENST00000639811 HDLBPQ00341 1268 aaKnown RBP11.19□□□□□ -0.62
NECAP1-219ENST00000639811 INF2Q27J81 1249 aa11.19□□□□□ -0.62
NECAP1-219ENST00000639811 KANK3Q6NY19 840 aa11.19□□□□□ -0.62
NECAP1-219ENST00000639811 SH3BP5LQ7L8J4 393 aa11.19□□□□□ -0.62
NECAP1-219ENST00000639811 FAM177A1Q8N128 213 aaPredicted RBP11.19□□□□□ -0.62
NECAP1-219ENST00000639811 CACTINQ8WUQ7 758 aaKnown RBP11.19□□□□□ -0.62
NECAP1-219ENST00000639811 SMARCE1Q969G3 411 aa11.19□□□□□ -0.62
NECAP1-219ENST00000639811 NAP1L5Q96NT1 182 aaPredicted RBP11.19□□□□□ -0.62
NECAP1-219ENST00000639811 EHD4Q9H223 541 aa11.19□□□□□ -0.62
NECAP1-219ENST00000639811 C10orf71Q711Q0 1435 aa11.19□□□□□ -0.62
NECAP1-219ENST00000639811 FAM196BA6NMK8 535 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 ATP1A3P13637 1013 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 CASP1P29466 404 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 AFMP43652 599 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 RBM5P52756 815 aaKnown RBP eCLIP11.18□□□□□ -0.62
NECAP1-219ENST00000639811 MYL5Q02045 173 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 ARID5BQ14865 1188 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 E2F4Q16254 413 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 SHROOM1Q2M3G4 852 aaPredicted RBP11.18□□□□□ -0.62
NECAP1-219ENST00000639811 ARL6IP4Q66PJ3 421 aaKnown RBP11.18□□□□□ -0.62
NECAP1-219ENST00000639811 PAGE5Q96GU1 130 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 IDI2Q9BXS1 227 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 XPO4Q9C0E2 1151 aaKnown RBP11.18□□□□□ -0.62
NECAP1-219ENST00000639811 TMEM60Q9H2L4 133 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 SPTLC3Q9NUV7 552 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 IFNKQ9P0W0 207 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 SMCO2A6NFE2 343 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 ASPRV1Q53RT3 343 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 GPCPD1Q9NPB8 672 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 SEC63Q9UGP8 760 aaKnown RBP11.18□□□□□ -0.62
NECAP1-219ENST00000639811 SERPINA10Q9UK55 444 aa11.18□□□□□ -0.62
NECAP1-219ENST00000639811 MPHOSPH10O00566 681 aaKnown RBP11.17□□□□□ -0.62
NECAP1-219ENST00000639811 TPM4P67936 248 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 FANCCQ00597 558 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 FMR1Q06787 632 aaKnown RBP eCLIP11.17□□□□□ -0.62
NECAP1-219ENST00000639811 DEFB132Q7Z7B7 95 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 MED15Q96RN5 788 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 PPIP5K2O43314 1243 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 SMC2O95347 1197 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 CDC25AP30304 524 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 ZNF543Q08ER8 600 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 DPYDQ12882 1025 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 CC2D2BQ6DHV5 1058 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 TTBK2Q6IQ55 1244 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 PDXDC2PQ6P474 469 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 TRIML1Q8N9V2 468 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 MLKLQ8NB16 471 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 CCDC12Q8WUD4 166 aaPredicted RBP11.17□□□□□ -0.62
NECAP1-219ENST00000639811 DHX36Q9H2U1 1008 aaKnown RBP11.17□□□□□ -0.62
NECAP1-219ENST00000639811 C6orf50Q9HD87 102 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 FANCLQ9NW38 375 aa11.17□□□□□ -0.62
NECAP1-219ENST00000639811 MYH4Q9Y623 1939 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 GNA11P29992 359 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 LONP1P36776 959 aaKnown RBP11.16□□□□□ -0.62
NECAP1-219ENST00000639811 ATP2B2Q01814 1243 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 KRT25Q7Z3Z0 450 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 FILIP1Q7Z7B0 1213 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 LRRC8AQ8IWT6 810 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 SUPT20HQ8NEM7 779 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 STAMQ92783 540 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 DPF2Q92785 391 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 COA7Q96BR5 231 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 CCDC17Q96LX7 622 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 MTRQ99707 1265 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 TDRD3Q9H7E2 651 aaKnown RBP11.16□□□□□ -0.62
NECAP1-219ENST00000639811 JMJD4Q9H9V9 463 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 R3HCC1Q9Y3T6 440 aaKnown RBP11.16□□□□□ -0.62
NECAP1-219ENST00000639811 ESYT2A0FGR8 921 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 PPP1R11O60927 126 aaPredicted RBP11.16□□□□□ -0.62
NECAP1-219ENST00000639811 NPM3O75607 178 aaKnown RBP11.16□□□□□ -0.62
NECAP1-219ENST00000639811 NONOQ15233 471 aaKnown RBP eCLIP11.16□□□□□ -0.62
NECAP1-219ENST00000639811 CFAP100Q494V2 611 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 SOGA3Q5TF21 947 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 ADGRF4Q8IZF3 695 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 IQUBQ8NA54 791 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 PRMT6Q96LA8 375 aaPredicted RBP11.16□□□□□ -0.62
NECAP1-219ENST00000639811 TMEM260Q9NX78 707 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 PI4KBQ9UBF8 816 aa11.16□□□□□ -0.62
NECAP1-219ENST00000639811 BIN2Q9UBW5 565 aaPredicted RBP11.16□□□□□ -0.62
NECAP1-219ENST00000639811 COL4A5P29400 1685 aa11.15□□□□□ -0.62
NECAP1-219ENST00000639811 PP2D1A8MPX8 630 aa11.15□□□□□ -0.62
NECAP1-219ENST00000639811 KCNA3P22001 575 aa11.15□□□□□ -0.62
NECAP1-219ENST00000639811 SLC16A2P36021 539 aa11.15□□□□□ -0.62
NECAP1-219ENST00000639811 JAKMIP3Q5VZ66 844 aa11.15□□□□□ -0.62
NECAP1-219ENST00000639811 TATDN1Q6P1N9 297 aa11.15□□□□□ -0.62
NECAP1-219ENST00000639811 DTHD1Q6ZMT9 781 aa11.15□□□□□ -0.62
NECAP1-219ENST00000639811 SIAH1Q8IUQ4 282 aa11.15□□□□□ -0.62
NECAP1-219ENST00000639811 ZSCAN29Q8IWY8 852 aaPredicted RBP11.15□□□□□ -0.62
NECAP1-219ENST00000639811 TRMT44Q8IYL2 757 aaKnown RBP11.15□□□□□ -0.62
NECAP1-219ENST00000639811 TTLL6Q8N841 843 aa11.15□□□□□ -0.62
NECAP1-219ENST00000639811 FBXO41Q8TF61 875 aa11.15□□□□□ -0.62
NECAP1-219ENST00000639811 hCG_1984214I3L0E3 225 aa11.14□□□□□ -0.63
NECAP1-219ENST00000639811 EDIL3O43854 480 aa11.14□□□□□ -0.63
NECAP1-219ENST00000639811 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
NECAP1-219ENST00000639811 KARSQ15046 597 aaKnown RBP11.14□□□□□ -0.63
NECAP1-219ENST00000639811 LETM2Q2VYF4 491 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms