RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 GNAT3A8MTJ3 354 aa8.86□□□□□ -0.99
RFC1-217ENST00000639695 DIAPH1O60610 1272 aaKnown RBP8.86□□□□□ -0.99
RFC1-217ENST00000639695 PLCG1P19174 1290 aa8.86□□□□□ -0.99
RFC1-217ENST00000639695 KRTAP19-4Q3LI73 84 aa8.86□□□□□ -0.99
RFC1-217ENST00000639695 ZC3H12BQ5HYM0 836 aaKnown RBP8.86□□□□□ -0.99
RFC1-217ENST00000639695 VHLLQ6RSH7 139 aa8.86□□□□□ -0.99
RFC1-217ENST00000639695 SYDE1Q6ZW31 735 aaPredicted RBP8.86□□□□□ -0.99
RFC1-217ENST00000639695 SPATC1Q76KD6 591 aa8.86□□□□□ -0.99
RFC1-217ENST00000639695 EPN3Q9H201 632 aa8.86□□□□□ -0.99
RFC1-217ENST00000639695 FBRSQ9HAH7 460 aa8.86□□□□□ -0.99
RFC1-217ENST00000639695 PRDM5Q9NQX1 630 aaPredicted RBP8.86□□□□□ -0.99
RFC1-217ENST00000639695 PICK1Q9NRD5 415 aa8.86□□□□□ -0.99
RFC1-217ENST00000639695 REV1Q9UBZ9 1251 aa8.86□□□□□ -0.99
RFC1-217ENST00000639695 PLAAQ9Y263 795 aa8.86□□□□□ -0.99
RFC1-217ENST00000639695 PTCH2Q9Y6C5 1203 aa8.86□□□□□ -0.99
RFC1-217ENST00000639695 FANCGO15287 622 aa8.85□□□□□ -0.99
RFC1-217ENST00000639695 ASMTLO95671 621 aa8.85□□□□□ -0.99
RFC1-217ENST00000639695 GLI1P08151 1106 aa8.85□□□□□ -0.99
RFC1-217ENST00000639695 AFMP43652 599 aa8.85□□□□□ -0.99
RFC1-217ENST00000639695 LONRF2Q1L5Z9 754 aa8.85□□□□□ -0.99
RFC1-217ENST00000639695 LRRC56Q8IYG6 542 aaPredicted RBP8.85□□□□□ -0.99
RFC1-217ENST00000639695 PLPPR2Q96GM1 343 aa8.85□□□□□ -0.99
RFC1-217ENST00000639695 SLC26A8Q96RN1 970 aa8.85□□□□□ -0.99
RFC1-217ENST00000639695 LMCD1Q9NZU5 365 aa8.85□□□□□ -0.99
RFC1-217ENST00000639695 B2RBV5 119 aa8.84□□□□□ -0.99
RFC1-217ENST00000639695 CDK8P49336 464 aa8.84□□□□□ -0.99
RFC1-217ENST00000639695 AMPD3Q01432 767 aa8.84□□□□□ -0.99
RFC1-217ENST00000639695 INPP5AQ14642 412 aa8.84□□□□□ -0.99
RFC1-217ENST00000639695 CDKAL1Q5VV42 579 aa8.84□□□□□ -0.99
RFC1-217ENST00000639695 UNC5AQ6ZN44 842 aa8.84□□□□□ -0.99
RFC1-217ENST00000639695 CYFIP1Q7L576 1253 aa8.84□□□□□ -0.99
RFC1-217ENST00000639695 NLRC3Q7RTR2 1065 aa8.84□□□□□ -0.99
RFC1-217ENST00000639695 LRRC47Q8N1G4 583 aaKnown RBP8.84□□□□□ -0.99
RFC1-217ENST00000639695 ATG4CQ96DT6 458 aa8.84□□□□□ -0.99
RFC1-217ENST00000639695 KIRREL1Q96J84 757 aa8.84□□□□□ -0.99
RFC1-217ENST00000639695 FOXQ1Q9C009 403 aa8.84□□□□□ -0.99
RFC1-217ENST00000639695 DDX56Q9NY93 547 aaKnown RBP8.84□□□□□ -0.99
RFC1-217ENST00000639695 CCDC163A0A0D9SF12 145 aa8.83□□□□□ -1
RFC1-217ENST00000639695 SLC22A31A6NKX4 558 aa8.83□□□□□ -1
RFC1-217ENST00000639695 C1QTNF9P0C862 333 aa8.83□□□□□ -1
RFC1-217ENST00000639695 NME1P15531 152 aaKnown RBP8.83□□□□□ -1
RFC1-217ENST00000639695 TKFCQ3LXA3 575 aa8.83□□□□□ -1
RFC1-217ENST00000639695 LRFN4Q6PJG9 635 aa8.83□□□□□ -1
RFC1-217ENST00000639695 TOX2Q96NM4 488 aa8.83□□□□□ -1
RFC1-217ENST00000639695 SPATA9Q9BWV2 254 aa8.83□□□□□ -1
RFC1-217ENST00000639695 KLHL42Q9P2K6 505 aa8.83□□□□□ -1
RFC1-217ENST00000639695 CORINQ9Y5Q5 1042 aa8.83□□□□□ -1
RFC1-217ENST00000639695 AGRPO00253 132 aa8.82□□□□□ -1
RFC1-217ENST00000639695 SLBPQ14493 270 aaKnown RBP eCLIP8.82□□□□□ -1
RFC1-217ENST00000639695 NKG7Q16617 165 aa8.82□□□□□ -1
RFC1-217ENST00000639695 TMEM67Q5HYA8 995 aa8.82□□□□□ -1
RFC1-217ENST00000639695 TMEM201Q5SNT2 666 aa8.82□□□□□ -1
RFC1-217ENST00000639695 CCDC181Q5TID7 509 aa8.82□□□□□ -1
RFC1-217ENST00000639695 CDCP2Q5VXM1 449 aa8.82□□□□□ -1
RFC1-217ENST00000639695 OVOS1Q6IE37 1185 aa8.82□□□□□ -1
RFC1-217ENST00000639695 MPZL3Q6UWV2 235 aa8.82□□□□□ -1
RFC1-217ENST00000639695 CDC37L1Q7L3B6 337 aa8.82□□□□□ -1
RFC1-217ENST00000639695 RIN3Q8TB24 985 aa8.82□□□□□ -1
RFC1-217ENST00000639695 CHMP4AQ9BY43 222 aa8.82□□□□□ -1
RFC1-217ENST00000639695 CNNM2Q9H8M5 875 aa8.82□□□□□ -1
RFC1-217ENST00000639695 H3BS24 57 aa8.81□□□□□ -1
RFC1-217ENST00000639695 SLC7A5Q01650 507 aa8.81□□□□□ -1
RFC1-217ENST00000639695 BBS9Q3SYG4 887 aa8.81□□□□□ -1
RFC1-217ENST00000639695 DALRD3Q5D0E6 543 aaKnown RBP8.81□□□□□ -1
RFC1-217ENST00000639695 MRM1Q6IN84 353 aaKnown RBP8.81□□□□□ -1
RFC1-217ENST00000639695 KIAA1211LQ6NV74 962 aa8.81□□□□□ -1
RFC1-217ENST00000639695 RPUSD2Q8IZ73 545 aaKnown RBP8.81□□□□□ -1
RFC1-217ENST00000639695 ADAM30Q9UKF2 790 aa8.81□□□□□ -1
RFC1-217ENST00000639695 ST14Q9Y5Y6 855 aa8.81□□□□□ -1
RFC1-217ENST00000639695 TNFRSF10CO14798 259 aa8.8□□□□□ -1
RFC1-217ENST00000639695 LRIG2O94898 1065 aa8.8□□□□□ -1
RFC1-217ENST00000639695 VIL1P09327 827 aaKnown RBP8.8□□□□□ -1
RFC1-217ENST00000639695 NAT2P11245 290 aa8.8□□□□□ -1
RFC1-217ENST00000639695 RAG1P15918 1043 aa8.8□□□□□ -1
RFC1-217ENST00000639695 GNPTABQ3T906 1256 aa8.8□□□□□ -1
RFC1-217ENST00000639695 KRT26Q7Z3Y9 468 aa8.8□□□□□ -1
RFC1-217ENST00000639695 ZBTB38Q8NAP3 1195 aaPredicted RBP8.8□□□□□ -1
RFC1-217ENST00000639695 DHRS1Q96LJ7 313 aa8.8□□□□□ -1
RFC1-217ENST00000639695 IPO9Q96P70 1041 aaKnown RBP8.8□□□□□ -1
RFC1-217ENST00000639695 DIRC2Q96SL1 478 aa8.8□□□□□ -1
RFC1-217ENST00000639695 PPP1R16BQ96T49 567 aa8.8□□□□□ -1
RFC1-217ENST00000639695 POLR3GLQ9BT43 218 aa8.8□□□□□ -1
RFC1-217ENST00000639695 IRF2BPLQ9H1B7 796 aa8.8□□□□□ -1
RFC1-217ENST00000639695 TYW1Q9NV66 732 aaKnown RBP8.8□□□□□ -1
RFC1-217ENST00000639695 KLHL3Q9UH77 587 aa8.8□□□□□ -1
RFC1-217ENST00000639695 CD2APQ9Y5K6 639 aa8.8□□□□□ -1
RFC1-217ENST00000639695 CAPN6Q9Y6Q1 641 aa8.8□□□□□ -1
RFC1-217ENST00000639695 LTBP3Q9NS15 1303 aa8.8□□□□□ -1
RFC1-217ENST00000639695 PRAMEF27A3QJZ7 478 aa8.79□□□□□ -1
RFC1-217ENST00000639695 UPK3BL1B0FP48 263 aa8.79□□□□□ -1
RFC1-217ENST00000639695 FAM155AB1AL88 458 aaPredicted RBP8.79□□□□□ -1
RFC1-217ENST00000639695 UPK3BL2E5RIL1 263 aa8.79□□□□□ -1
RFC1-217ENST00000639695 SUSD5O60279 629 aa8.79□□□□□ -1
RFC1-217ENST00000639695 S100BP04271 92 aaPredicted RBP8.79□□□□□ -1
RFC1-217ENST00000639695 PGRP06401 933 aa8.79□□□□□ -1
RFC1-217ENST00000639695 FAM153BP0C7A2 387 aa8.79□□□□□ -1
RFC1-217ENST00000639695 ZSCAN22P10073 491 aaPredicted RBP8.79□□□□□ -1
RFC1-217ENST00000639695 ACRP10323 421 aa8.79□□□□□ -1
RFC1-217ENST00000639695 CNGA1P29973 690 aa8.79□□□□□ -1
RFC1-217ENST00000639695 GDNFP39905 211 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 195.8 ms