RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 RBM28Q9NW13 759 aaKnown RBP6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 CCPG1Q9ULG6 757 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 KCNH4Q9UQ05 1017 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 NAV1Q8NEY1 1877 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 CDKL5O76039 1030 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 ALDH1A1P00352 501 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 PDIA3P30101 505 aaKnown RBP6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 MAP2K1Q02750 393 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 FOXD4L5Q5VV16 416 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 PRPF38AQ8NAV1 312 aaKnown RBP6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 FOXD4L4Q8WXT5 416 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 PIGSQ96S52 555 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 TPCN1Q9ULQ1 816 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 IGKV6D-41A0A0C4DH26 115 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 IGF2BP3O00425 579 aaKnown RBP eCLIP6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 MCM2P49736 904 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 HERVK_113P62684 666 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 TOB2Q14106 344 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 MCTP1Q6DN14 999 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 KCNB2Q92953 911 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 ORC3Q9UBD5 711 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 BIN2Q9UBW5 565 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 H3BQV1 296 aa6.71□□□□□ -1.33
HNRNPU-220ENST00000639667 MAP2K2P36507 400 aa6.71□□□□□ -1.33
HNRNPU-220ENST00000639667 CCNA1P78396 465 aa6.71□□□□□ -1.33
HNRNPU-220ENST00000639667 GUCY1B3Q02153 619 aa6.71□□□□□ -1.33
HNRNPU-220ENST00000639667 GRM4Q14833 912 aa6.71□□□□□ -1.33
HNRNPU-220ENST00000639667 IFFO2Q5TF58 517 aa6.71□□□□□ -1.33
HNRNPU-220ENST00000639667 SNRNP48Q6IEG0 339 aaKnown RBP6.71□□□□□ -1.33
HNRNPU-220ENST00000639667 CATSPERGQ6ZRH7 1159 aa6.71□□□□□ -1.33
HNRNPU-220ENST00000639667 ANKRD23Q86SG2 305 aa6.71□□□□□ -1.33
HNRNPU-220ENST00000639667 MKL1Q969V6 931 aa6.71□□□□□ -1.33
HNRNPU-220ENST00000639667 PRR12Q9ULL5 1215 aa6.71□□□□□ -1.33
HNRNPU-220ENST00000639667 PTPDC1A2A3K4 754 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 TAL1P17542 331 aaPredicted RBP6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 NAPAP54920 295 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 CDC37Q16543 378 aaPredicted RBP6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 ME3Q16798 604 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 FBXO11Q86XK2 927 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 ADGRF4Q8IZF3 695 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 GMCL1P1Q8NEA9 526 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 HHIPL1Q96JK4 782 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 KIF3AQ9Y496 699 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 MYCP01106 439 aaPredicted RBP6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 XBP1P17861 261 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 DSG3P32926 999 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 STAT3P40763 770 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 CRHR2Q13324 411 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 GPKOWQ92917 476 aaPredicted RBP eCLIP6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 CUL5Q93034 780 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 COA7Q96BR5 231 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 TMX3Q96JJ7 454 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 MS4A4AQ96JQ5 239 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 PTPN18Q99952 460 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 LZTS2Q9BRK4 669 aa6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 SH2B1Q9NRF2 756 aaPredicted RBP6.71□□□□□ -1.34
HNRNPU-220ENST00000639667 WDR19Q8NEZ3 1342 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 LARGE1O95461 756 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 CFBP00751 764 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 CDC27P30260 824 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 NLRP5P59047 1200 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 FCHSD1Q86WN1 690 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 ANKRD35Q8N283 1001 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 GPRC5AQ8NFJ5 357 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 ZNF274Q96GC6 653 aaPredicted RBP6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 MTA3Q9BTC8 594 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 RNF186Q9NXI6 227 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 PPP1R9AQ9ULJ8 1098 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 FAM155AB1AL88 458 aaPredicted RBP6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 K7ELQ4 463 aaPredicted RBP6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 TNPO2O14787 897 aaKnown RBP6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 ATP2B1P20020 1258 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 CALML3P27482 149 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 SH3D19Q5HYK7 790 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 SGMS1Q86VZ5 419 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 GMCL1Q96IK5 515 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 AGBL1Q96MI9 1066 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 VPS37CA5D8V6 355 aaPredicted RBP6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 MYCNP04198 464 aaPredicted RBP6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 GCLCP48506 637 aaPredicted RBP6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 SCRN1Q12765 414 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 TROAPQ12815 778 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 KCTD2Q14681 263 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 QRICH1Q2TAL8 776 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 TPRNQ4KMQ1 711 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 GPAT2Q6NUI2 795 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 DPP9Q86TI2 863 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 ANKS1AQ92625 1134 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 MAD2L2Q9UI95 211 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 PCDHA1Q9Y5I3 950 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 PAPPA2Q9BXP8 1791 aa6.7□□□□□ -1.34
HNRNPU-220ENST00000639667 SPDYE16A6NNV3 312 aaPredicted RBP6.69□□□□□ -1.34
HNRNPU-220ENST00000639667 CA12O43570 354 aa6.69□□□□□ -1.34
HNRNPU-220ENST00000639667 JAK2O60674 1132 aa6.69□□□□□ -1.34
HNRNPU-220ENST00000639667 SAFBQ15424 915 aaKnown RBP eCLIP6.69□□□□□ -1.34
HNRNPU-220ENST00000639667 TMTC3Q6ZXV5 915 aa6.69□□□□□ -1.34
HNRNPU-220ENST00000639667 REM2Q8IYK8 340 aaPredicted RBP6.69□□□□□ -1.34
HNRNPU-220ENST00000639667 SRBD1Q8N5C6 995 aaKnown RBP6.69□□□□□ -1.34
HNRNPU-220ENST00000639667 SMARCC2Q8TAQ2 1214 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms