RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 HAUS7Q99871 368 aa18■□□□□ 0.47
SYNE2-228ENST00000639659 TEX13BQ9BXU2 312 aa18■□□□□ 0.47
SYNE2-228ENST00000639659 FAM184BQ9ULE4 1060 aa18■□□□□ 0.47
SYNE2-228ENST00000639659 ROBO3Q96MS0 1386 aa18■□□□□ 0.47
SYNE2-228ENST00000639659 ZBED9Q6R2W3 1325 aa17.99■□□□□ 0.47
SYNE2-228ENST00000639659 MYADML2A6NDP7 307 aa17.99■□□□□ 0.47
SYNE2-228ENST00000639659 MINDY4BA8MYZ0 360 aa17.99■□□□□ 0.47
SYNE2-228ENST00000639659 C6orf222P0C671 652 aaPredicted RBP17.99■□□□□ 0.47
SYNE2-228ENST00000639659 IRX5P78411 483 aaPredicted RBP17.99■□□□□ 0.47
SYNE2-228ENST00000639659 FAAP100Q0VG06 881 aa17.99■□□□□ 0.47
SYNE2-228ENST00000639659 GRIN2CQ14957 1233 aa17.99■□□□□ 0.47
SYNE2-228ENST00000639659 KCNA10Q16322 511 aa17.99■□□□□ 0.47
SYNE2-228ENST00000639659 CCDC129Q6ZRS4 1044 aa17.99■□□□□ 0.47
SYNE2-228ENST00000639659 RPAP2Q8IXW5 612 aaPredicted RBP17.99■□□□□ 0.47
SYNE2-228ENST00000639659 PUS7LQ9H0K6 701 aaKnown RBP17.99■□□□□ 0.47
SYNE2-228ENST00000639659 MKNK2Q9HBH9 465 aa17.99■□□□□ 0.47
SYNE2-228ENST00000639659 ARPP21Q9UBL0 812 aaPredicted RBP17.99■□□□□ 0.47
SYNE2-228ENST00000639659 RIPK3Q9Y572 518 aa17.99■□□□□ 0.47
SYNE2-228ENST00000639659 MS4A1P11836 297 aa17.98■□□□□ 0.47
SYNE2-228ENST00000639659 UBE3CQ15386 1083 aa17.98■□□□□ 0.47
SYNE2-228ENST00000639659 ZSCAN25Q6NSZ9 544 aa17.98■□□□□ 0.47
SYNE2-228ENST00000639659 SIRT2Q8IXJ6 389 aa17.98■□□□□ 0.47
SYNE2-228ENST00000639659 USP38Q8NB14 1042 aa17.98■□□□□ 0.47
SYNE2-228ENST00000639659 KIFC2Q96AC6 838 aa17.98■□□□□ 0.47
SYNE2-228ENST00000639659 GLT1D1Q96MS3 346 aa17.98■□□□□ 0.47
SYNE2-228ENST00000639659 TSEN34Q9BSV6 310 aaKnown RBP17.98■□□□□ 0.47
SYNE2-228ENST00000639659 PPP1R12CQ9BZL4 782 aa17.98■□□□□ 0.47
SYNE2-228ENST00000639659 RAVER2Q9HCJ3 691 aaKnown RBP17.98■□□□□ 0.47
SYNE2-228ENST00000639659 VCANP13611 3396 aa17.98■□□□□ 0.47
SYNE2-228ENST00000639659 TMEM265A0A087WTH1 108 aa17.97■□□□□ 0.47
SYNE2-228ENST00000639659 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.97■□□□□ 0.47
SYNE2-228ENST00000639659 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.97■□□□□ 0.47
SYNE2-228ENST00000639659 MOXD2PA6NHM9 499 aa17.97■□□□□ 0.47
SYNE2-228ENST00000639659 SMARCA5O60264 1052 aaPredicted RBP17.97■□□□□ 0.47
SYNE2-228ENST00000639659 ZBED4O75132 1171 aa17.97■□□□□ 0.47
SYNE2-228ENST00000639659 SNAI1O95863 264 aaPredicted RBP17.97■□□□□ 0.47
SYNE2-228ENST00000639659 NDUFB10O96000 172 aa17.97■□□□□ 0.47
SYNE2-228ENST00000639659 ANKRD35Q8N283 1001 aa17.97■□□□□ 0.47
SYNE2-228ENST00000639659 CHMP4CQ96CF2 233 aa17.97■□□□□ 0.47
SYNE2-228ENST00000639659 TIFAQ96CG3 184 aa17.97■□□□□ 0.47
SYNE2-228ENST00000639659 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.97■□□□□ 0.47
SYNE2-228ENST00000639659 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.97■□□□□ 0.47
SYNE2-228ENST00000639659 HOMER2Q9NSB8 354 aa17.97■□□□□ 0.47
SYNE2-228ENST00000639659 DDX19BQ9UMR2 479 aa17.97■□□□□ 0.47
SYNE2-228ENST00000639659 MCM3APO60318 1980 aa17.97■□□□□ 0.47
SYNE2-228ENST00000639659 SYNGAP1Q96PV0 1343 aa17.97■□□□□ 0.47
SYNE2-228ENST00000639659 CDH23Q9H251 3354 aa17.96■□□□□ 0.47
SYNE2-228ENST00000639659 MYH4Q9Y623 1939 aa17.96■□□□□ 0.47
SYNE2-228ENST00000639659 F5H6K3 240 aa17.96■□□□□ 0.47
SYNE2-228ENST00000639659 TIMP1P01033 207 aa17.96■□□□□ 0.47
SYNE2-228ENST00000639659 RASA1P20936 1047 aa17.96■□□□□ 0.47
SYNE2-228ENST00000639659 KLRC3Q07444 240 aa17.96■□□□□ 0.47
SYNE2-228ENST00000639659 NOL8Q76FK4 1167 aaKnown RBP17.96■□□□□ 0.47
SYNE2-228ENST00000639659 ANKRD33Q7Z3H0 272 aa17.96■□□□□ 0.47
SYNE2-228ENST00000639659 SYMPKQ92797 1274 aaKnown RBP17.96■□□□□ 0.47
SYNE2-228ENST00000639659 ZNF576Q9H609 170 aa17.96■□□□□ 0.47
SYNE2-228ENST00000639659 SPC25Q9HBM1 224 aa17.96■□□□□ 0.47
SYNE2-228ENST00000639659 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.96■□□□□ 0.47
SYNE2-228ENST00000639659 CLIP2Q9UDT6 1046 aa17.96■□□□□ 0.47
SYNE2-228ENST00000639659 GREB1LQ9C091 1923 aaPredicted RBP17.96■□□□□ 0.47
SYNE2-228ENST00000639659 GRXCR1A8MXD5 290 aa17.95■□□□□ 0.46
SYNE2-228ENST00000639659 DUSP11O75319 330 aaKnown RBP17.95■□□□□ 0.46
SYNE2-228ENST00000639659 PRDM1O75626 825 aa17.95■□□□□ 0.46
SYNE2-228ENST00000639659 ASGR1P07306 291 aa17.95■□□□□ 0.46
SYNE2-228ENST00000639659 ACRP10323 421 aa17.95■□□□□ 0.46
SYNE2-228ENST00000639659 PPIGQ13427 754 aaKnown RBP eCLIP17.95■□□□□ 0.46
SYNE2-228ENST00000639659 ACVR2BQ13705 512 aa17.95■□□□□ 0.46
SYNE2-228ENST00000639659 LRRC47Q8N1G4 583 aaKnown RBP17.95■□□□□ 0.46
SYNE2-228ENST00000639659 PRPF38AQ8NAV1 312 aaKnown RBP17.95■□□□□ 0.46
SYNE2-228ENST00000639659 KLHDC9Q8NEP7 349 aa17.95■□□□□ 0.46
SYNE2-228ENST00000639659 TOX2Q96NM4 488 aa17.95■□□□□ 0.46
SYNE2-228ENST00000639659 MROH7Q68CQ1 1323 aa17.95■□□□□ 0.46
SYNE2-228ENST00000639659 PBX2P40425 430 aa17.94■□□□□ 0.46
SYNE2-228ENST00000639659 TDO2P48775 406 aa17.94■□□□□ 0.46
SYNE2-228ENST00000639659 CCDC144BQ3MJ40 725 aa17.94■□□□□ 0.46
SYNE2-228ENST00000639659 GNASQ5JWF2 1037 aa17.94■□□□□ 0.46
SYNE2-228ENST00000639659 MFSD5Q6N075 450 aa17.94■□□□□ 0.46
SYNE2-228ENST00000639659 MSL3Q8N5Y2 521 aaKnown RBP17.94■□□□□ 0.46
SYNE2-228ENST00000639659 PCSK9Q8NBP7 692 aaKnown RBP17.94■□□□□ 0.46
SYNE2-228ENST00000639659 GAS2L1Q99501 681 aaPredicted RBP17.94■□□□□ 0.46
SYNE2-228ENST00000639659 PRDM6Q9NQX0 595 aa17.94■□□□□ 0.46
SYNE2-228ENST00000639659 ZBTB40Q9NUA8 1239 aa17.94■□□□□ 0.46
SYNE2-228ENST00000639659 NYAP2Q9P242 653 aa17.94■□□□□ 0.46
SYNE2-228ENST00000639659 TBX21Q9UL17 535 aa17.94■□□□□ 0.46
SYNE2-228ENST00000639659 A0A0U1RQG5 324 aaPredicted RBP17.93■□□□□ 0.46
SYNE2-228ENST00000639659 ADCY6O43306 1168 aa17.93■□□□□ 0.46
SYNE2-228ENST00000639659 APPP05067 770 aa17.93■□□□□ 0.46
SYNE2-228ENST00000639659 CSF2RAP15509 400 aa17.93■□□□□ 0.46
SYNE2-228ENST00000639659 IKQ13123 557 aaPredicted RBP17.93■□□□□ 0.46
SYNE2-228ENST00000639659 CCDC174Q6PII3 467 aa17.93■□□□□ 0.46
SYNE2-228ENST00000639659 ARMCX2Q7L311 632 aa17.93■□□□□ 0.46
SYNE2-228ENST00000639659 STRBPQ96SI9 672 aaKnown RBP17.93■□□□□ 0.46
SYNE2-228ENST00000639659 LRRCC1Q9C099 1032 aa17.93■□□□□ 0.46
SYNE2-228ENST00000639659 DNAJC25-GNG10A0A024R161 153 aa17.92■□□□□ 0.46
SYNE2-228ENST00000639659 TLR3O15455 904 aaKnown RBP17.92■□□□□ 0.46
SYNE2-228ENST00000639659 BEX3Q00994 111 aa17.92■□□□□ 0.46
SYNE2-228ENST00000639659 TJAP1Q5JTD0 557 aa17.92■□□□□ 0.46
SYNE2-228ENST00000639659 TSHZ3Q63HK5 1081 aa17.92■□□□□ 0.46
SYNE2-228ENST00000639659 CCSAPQ6IQ19 270 aaPredicted RBP17.92■□□□□ 0.46
SYNE2-228ENST00000639659 MAMDC4Q6UXC1 1216 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms