RNA–Protein interactions for RNA: ENST00000639324.1

SCARB2-217, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-217ENST00000639324 MLH3Q9UHC1 1453 aa8.22□□□□□ -1.09
SCARB2-217ENST00000639324 UPK3BL1B0FP48 263 aa8.22□□□□□ -1.09
SCARB2-217ENST00000639324 UPK3BL2E5RIL1 263 aa8.22□□□□□ -1.09
SCARB2-217ENST00000639324 ERCC5P28715 1186 aaPredicted RBP8.22□□□□□ -1.09
SCARB2-217ENST00000639324 TPP2P29144 1249 aaPredicted RBP8.22□□□□□ -1.09
SCARB2-217ENST00000639324 TRHRP34981 398 aaPredicted RBP8.22□□□□□ -1.09
SCARB2-217ENST00000639324 ETV3P41162 512 aa8.22□□□□□ -1.09
SCARB2-217ENST00000639324 C9orf131Q5VYM1 1079 aa8.22□□□□□ -1.09
SCARB2-217ENST00000639324 ANKLE2Q86XL3 938 aa8.22□□□□□ -1.09
SCARB2-217ENST00000639324 CREG2Q8IUH2 290 aa8.22□□□□□ -1.09
SCARB2-217ENST00000639324 PHC3Q8NDX5 983 aa8.22□□□□□ -1.09
SCARB2-217ENST00000639324 JARID2Q92833 1246 aaPredicted RBP8.22□□□□□ -1.09
SCARB2-217ENST00000639324 CD320Q9NPF0 282 aa8.22□□□□□ -1.09
SCARB2-217ENST00000639324 GGT7Q9UJ14 662 aa8.22□□□□□ -1.09
SCARB2-217ENST00000639324 CPS1P31327 1500 aa8.22□□□□□ -1.09
SCARB2-217ENST00000639324 USP31Q70CQ4 1352 aa8.22□□□□□ -1.09
SCARB2-217ENST00000639324 HNRNPMP52272 730 aaKnown RBP eCLIP8.21□□□□□ -1.1
SCARB2-217ENST00000639324 HDLBPQ00341 1268 aaKnown RBP8.21□□□□□ -1.1
SCARB2-217ENST00000639324 FANCCQ00597 558 aa8.21□□□□□ -1.1
SCARB2-217ENST00000639324 DTWD2Q8NBA8 298 aa8.21□□□□□ -1.1
SCARB2-217ENST00000639324 MYLIPQ8WY64 445 aa8.21□□□□□ -1.1
SCARB2-217ENST00000639324 KDM5CP41229 1560 aa8.21□□□□□ -1.1
SCARB2-217ENST00000639324 PREX2Q70Z35 1606 aa8.21□□□□□ -1.1
SCARB2-217ENST00000639324 PDE4BQ07343 736 aa8.2□□□□□ -1.1
SCARB2-217ENST00000639324 BNC2Q6ZN30 1099 aaPredicted RBP8.2□□□□□ -1.1
SCARB2-217ENST00000639324 GPR62Q9BZJ7 368 aa8.2□□□□□ -1.1
SCARB2-217ENST00000639324 EPB41L4BQ9H329 900 aa8.2□□□□□ -1.1
SCARB2-217ENST00000639324 DCP1AQ9NPI6 582 aaPredicted RBP8.2□□□□□ -1.1
SCARB2-217ENST00000639324 RGS17Q9UGC6 210 aaPredicted RBP8.2□□□□□ -1.1
SCARB2-217ENST00000639324 KIAA1107Q9UPP5 1409 aa8.2□□□□□ -1.1
SCARB2-217ENST00000639324 AGLP35573 1532 aa8.19□□□□□ -1.1
SCARB2-217ENST00000639324 EHBP1L1Q8N3D4 1523 aa8.19□□□□□ -1.1
SCARB2-217ENST00000639324 SYCP2Q9BX26 1530 aa8.19□□□□□ -1.1
SCARB2-217ENST00000639324 GPATCH8Q9UKJ3 1502 aaKnown RBP8.19□□□□□ -1.1
SCARB2-217ENST00000639324 C3P01024 1663 aa8.19□□□□□ -1.1
SCARB2-217ENST00000639324 FAM221AA4D161 298 aa8.19□□□□□ -1.1
SCARB2-217ENST00000639324 F6X3S4 739 aa8.19□□□□□ -1.1
SCARB2-217ENST00000639324 LRRN2O75325 713 aa8.19□□□□□ -1.1
SCARB2-217ENST00000639324 MED14OSP0DP75 135 aa8.19□□□□□ -1.1
SCARB2-217ENST00000639324 ZSCAN22P10073 491 aaPredicted RBP8.19□□□□□ -1.1
SCARB2-217ENST00000639324 RAC2P15153 192 aa8.19□□□□□ -1.1
SCARB2-217ENST00000639324 TIGD5Q53EQ6 642 aa8.19□□□□□ -1.1
SCARB2-217ENST00000639324 NT5DC4Q86YG4 428 aa8.19□□□□□ -1.1
SCARB2-217ENST00000639324 CYB5D2Q8WUJ1 264 aa8.19□□□□□ -1.1
SCARB2-217ENST00000639324 NOC4LQ9BVI4 516 aaKnown RBP8.19□□□□□ -1.1
SCARB2-217ENST00000639324 RNF32Q9H0A6 362 aa8.19□□□□□ -1.1
SCARB2-217ENST00000639324 CCSER2Q9H7U1 834 aa8.19□□□□□ -1.1
SCARB2-217ENST00000639324 TCOF1Q13428 1488 aaKnown RBP8.19□□□□□ -1.1
SCARB2-217ENST00000639324 DIP2CQ9Y2E4 1556 aa8.18□□□□□ -1.1
SCARB2-217ENST00000639324 NPIPB6E9PJ23 425 aa8.18□□□□□ -1.1
SCARB2-217ENST00000639324 NFIBO00712 420 aa8.18□□□□□ -1.1
SCARB2-217ENST00000639324 CILPO75339 1184 aa8.18□□□□□ -1.1
SCARB2-217ENST00000639324 ZGLP1P0C6A0 271 aa8.18□□□□□ -1.1
SCARB2-217ENST00000639324 RLBP1P12271 317 aa8.18□□□□□ -1.1
SCARB2-217ENST00000639324 TMEM201Q5SNT2 666 aa8.18□□□□□ -1.1
SCARB2-217ENST00000639324 LDLRAD1Q5T700 205 aa8.18□□□□□ -1.1
SCARB2-217ENST00000639324 TSPYL5Q86VY4 417 aaPredicted RBP8.18□□□□□ -1.1
SCARB2-217ENST00000639324 SIAH1Q8IUQ4 282 aa8.18□□□□□ -1.1
SCARB2-217ENST00000639324 RELL1Q8IUW5 271 aa8.18□□□□□ -1.1
SCARB2-217ENST00000639324 ZSCAN18Q8TBC5 510 aaPredicted RBP8.18□□□□□ -1.1
SCARB2-217ENST00000639324 C19orf44Q9H6X5 657 aa8.18□□□□□ -1.1
SCARB2-217ENST00000639324 DUSP13Q9UII6 198 aa8.18□□□□□ -1.1
SCARB2-217ENST00000639324 REREQ9P2R6 1566 aa8.18□□□□□ -1.1
SCARB2-217ENST00000639324 ETV2O00321 342 aaPredicted RBP8.17□□□□□ -1.1
SCARB2-217ENST00000639324 PWP1Q13610 501 aa8.17□□□□□ -1.1
SCARB2-217ENST00000639324 GGT6Q6P531 493 aa8.17□□□□□ -1.1
SCARB2-217ENST00000639324 ATG14Q6ZNE5 492 aa8.17□□□□□ -1.1
SCARB2-217ENST00000639324 USP48Q86UV5 1035 aa8.17□□□□□ -1.1
SCARB2-217ENST00000639324 IGSF5Q9NSI5 407 aa8.17□□□□□ -1.1
SCARB2-217ENST00000639324 EBF1Q9UH73 591 aa8.17□□□□□ -1.1
SCARB2-217ENST00000639324 F13A1P00488 732 aa8.16□□□□□ -1.1
SCARB2-217ENST00000639324 TSPY4P0CV99 314 aa8.16□□□□□ -1.1
SCARB2-217ENST00000639324 TSPY10P0CW01 314 aa8.16□□□□□ -1.1
SCARB2-217ENST00000639324 PLCG1P19174 1290 aa8.16□□□□□ -1.1
SCARB2-217ENST00000639324 EGR3Q06889 387 aa8.16□□□□□ -1.1
SCARB2-217ENST00000639324 KCNA10Q16322 511 aa8.16□□□□□ -1.1
SCARB2-217ENST00000639324 DIEXFQ68CQ4 756 aaKnown RBP8.16□□□□□ -1.1
SCARB2-217ENST00000639324 CCDC84Q86UT8 332 aaPredicted RBP8.16□□□□□ -1.1
SCARB2-217ENST00000639324 AMIGO3Q86WK7 504 aa8.16□□□□□ -1.1
SCARB2-217ENST00000639324 FAM13CQ8NE31 585 aa8.16□□□□□ -1.1
SCARB2-217ENST00000639324 TRIT1Q9H3H1 467 aaKnown RBP8.16□□□□□ -1.1
SCARB2-217ENST00000639324 SHANK2Q9UPX8 1470 aa8.16□□□□□ -1.1
SCARB2-217ENST00000639324 PCDHA11Q9Y5I1 949 aa8.16□□□□□ -1.1
SCARB2-217ENST00000639324 ABCA6Q8N139 1617 aa8.15□□□□□ -1.1
SCARB2-217ENST00000639324 SAMD9LQ8IVG5 1584 aa8.15□□□□□ -1.1
SCARB2-217ENST00000639324 ATP7AQ04656 1500 aa8.15□□□□□ -1.1
SCARB2-217ENST00000639324 A2MP01023 1474 aa8.15□□□□□ -1.1
SCARB2-217ENST00000639324 VPS8Q8N3P4 1428 aa8.15□□□□□ -1.1
SCARB2-217ENST00000639324 PRR36Q9H6K5 1346 aa8.15□□□□□ -1.1
SCARB2-217ENST00000639324 SHISA3A0PJX4 238 aa8.15□□□□□ -1.1
SCARB2-217ENST00000639324 DNAJA2O60884 412 aa8.15□□□□□ -1.1
SCARB2-217ENST00000639324 GLDCP23378 1020 aa8.15□□□□□ -1.1
SCARB2-217ENST00000639324 GBP2P32456 591 aaPredicted RBP8.15□□□□□ -1.1
SCARB2-217ENST00000639324 CAMK2GQ13555 558 aaPredicted RBP8.15□□□□□ -1.1
SCARB2-217ENST00000639324 SLFN12Q8IYM2 578 aa8.15□□□□□ -1.1
SCARB2-217ENST00000639324 RNF141Q8WVD5 230 aa8.15□□□□□ -1.1
SCARB2-217ENST00000639324 RHOVQ96L33 236 aa8.15□□□□□ -1.1
SCARB2-217ENST00000639324 GPATCH2Q9NW75 528 aa8.15□□□□□ -1.1
SCARB2-217ENST00000639324 POLR3KQ9Y2Y1 108 aaPredicted RBP8.15□□□□□ -1.1
SCARB2-217ENST00000639324 ITSN2Q9NZM3 1697 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms