RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 FAM177BA6PVY3 158 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 RASA4O43374 803 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 CYP1A2P05177 515 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 HNRNPH1P31943 449 aaKnown RBP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 LRRC74AQ0VAA2 488 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 SMUG1Q53HV7 270 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 TMEM53Q6P2H8 277 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 RAB11FIP4Q86YS3 637 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 CLIP1P30622 1438 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 IFIT2P09913 472 aaKnown RBP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 EEF2P13639 858 aaKnown RBP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 MTTPP55157 894 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 ZNF445P59923 1031 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 UBXN1Q04323 297 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 CCDC84Q86UT8 332 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 IFNL1Q8IU54 200 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 GALNT15Q8N3T1 639 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 OR8K1Q8NGG5 319 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 SPIRE2Q8WWL2 714 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 ABHD8Q96I13 439 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 C8orf76Q96K31 380 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 STMN4Q9H169 189 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 PIH1D1Q9NWS0 290 aaKnown RBP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 ZMYND8Q9ULU4 1186 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 AKR1B15C9JRZ8 316 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 YKT6O15498 198 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 PDGFRBP09619 1106 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 POTEJP0CG39 1038 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 SFPQP23246 707 aaKnown RBP eCLIP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 CDC27P30260 824 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 SLC16A2P36021 539 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 HALP42357 657 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 GALNT17Q6IS24 598 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 TRIM50Q86XT4 487 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 CEP295NLQ96MC4 621 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 LRRD1A4D1F6 860 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 STMND1H3BQB6 276 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 AP3B1O00203 1094 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 STK25O00506 426 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 MBD3O95983 291 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 NKX1-1Q15270 411 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 LETM2Q2VYF4 491 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 HSP90AA5PQ58FG0 334 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 CCDC183Q5T5S1 534 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 GOLM1Q8NBJ4 401 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 CGREF1Q99674 301 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 PSTPIP2Q9H939 334 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 FRMD3A2A2Y4 597 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 RTN2O75298 545 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 MBD4O95243 580 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 PNMA6AP0CW24 399 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 ZNF3P17036 446 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 KCNA6P17658 529 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 CDK17Q00537 523 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 GEN1Q17RS7 908 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 CFAP70Q5T0N1 1121 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 CARNMT1Q8N4J0 409 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 TRPV6Q9H1D0 765 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 ZWILCHQ9H900 591 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 ARFGAP3Q9NP61 516 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 EDARQ9UNE0 448 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 ATXN2Q99700 1313 aaKnown RBP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 CTTNBP2Q8WZ74 1663 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 CCDC162PA2VCL2 907 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 GCOM1H8Y6P7 765 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 MAP3K6O95382 1288 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 CNGA1P29973 690 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 WDR45BQ5MNZ6 344 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 CEP70Q8NHQ1 597 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 EFHD2Q96C19 240 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 THAP11Q96EK4 314 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 BRD9Q9H8M2 597 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 APOEP02649 317 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 EIF2S2P20042 333 aaKnown RBP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 TRIM23P36406 574 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 ETV3P41162 512 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 BPIFB3P59826 476 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 SAFBQ15424 915 aaKnown RBP eCLIP4.75□□□□□ -1.65
SCN3A-209ENST00000639244 TMTC4Q5T4D3 741 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 SH3BP5LQ7L8J4 393 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 EHBP1Q8NDI1 1231 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 E2F7Q96AV8 911 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 PSKH2Q96QS6 385 aa4.75□□□□□ -1.65
SCN3A-209ENST00000639244 TMEM238LA0A1B0GVL6 79 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 GOLGA8CPA6NN73 597 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 TMCC2O75069 709 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 ASMTP46597 345 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 DSTNP60981 165 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 IFFO1Q0D2I5 559 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 LRP8Q14114 963 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 COG2Q14746 738 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 DPY19L2Q6NUT2 758 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 ARHGEF18Q6ZSZ5 1173 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 SPERTQ8NA61 448 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 SMARCE1Q969G3 411 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 CNDP2Q96KP4 475 aaKnown RBP4.74□□□□□ -1.65
SCN3A-209ENST00000639244 ZNF277Q9NRM2 450 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-209ENST00000639244 ATXN10Q9UBB4 475 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 BHMG1C9JSJ3 638 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-209ENST00000639244 TUBB4AP04350 444 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms