RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 NAPBQ9H115 298 aa20.09■□□□□ 0.81
SMN2-216ENST00000638794 PRKAG2Q9UGJ0 569 aa20.09■□□□□ 0.81
SMN2-216ENST00000638794 TTLL1O95922 423 aa20.08■□□□□ 0.81
SMN2-216ENST00000638794 ZNF865P0CJ78 1059 aaPredicted RBP20.08■□□□□ 0.81
SMN2-216ENST00000638794 RARBP10826 455 aa20.08■□□□□ 0.81
SMN2-216ENST00000638794 RRP1P56182 461 aaKnown RBP20.08■□□□□ 0.81
SMN2-216ENST00000638794 TRIM60Q495X7 471 aa20.08■□□□□ 0.81
SMN2-216ENST00000638794 Q7L0L9 218 aa20.08■□□□□ 0.81
SMN2-216ENST00000638794 CPXCR1Q8N123 301 aa20.08■□□□□ 0.81
SMN2-216ENST00000638794 DEFB123Q8N688 67 aa20.08■□□□□ 0.81
SMN2-216ENST00000638794 FERMT2Q96AC1 680 aa20.08■□□□□ 0.81
SMN2-216ENST00000638794 KIFC2Q96AC6 838 aa20.08■□□□□ 0.81
SMN2-216ENST00000638794 XPNPEP3Q9NQH7 507 aa20.08■□□□□ 0.81
SMN2-216ENST00000638794 SALL3Q9BXA9 1300 aa20.07■□□□□ 0.8
SMN2-216ENST00000638794 ATP2A1O14983 1001 aa20.07■□□□□ 0.8
SMN2-216ENST00000638794 ZBED4O75132 1171 aa20.07■□□□□ 0.8
SMN2-216ENST00000638794 TSPY3P0CV98 308 aa20.07■□□□□ 0.8
SMN2-216ENST00000638794 TSPY8P0CW00 308 aa20.07■□□□□ 0.8
SMN2-216ENST00000638794 SLC4A3P48751 1232 aa20.07■□□□□ 0.8
SMN2-216ENST00000638794 PDE4BQ07343 736 aa20.07■□□□□ 0.8
SMN2-216ENST00000638794 PPARAQ07869 468 aa20.07■□□□□ 0.8
SMN2-216ENST00000638794 GMCL1P1Q8NEA9 526 aa20.07■□□□□ 0.8
SMN2-216ENST00000638794 NEDD1Q8NHV4 660 aa20.07■□□□□ 0.8
SMN2-216ENST00000638794 SLC38A10Q9HBR0 1119 aa20.07■□□□□ 0.8
SMN2-216ENST00000638794 SYNPO2Q9UMS6 1093 aa20.07■□□□□ 0.8
SMN2-216ENST00000638794 MCM3APO60318 1980 aa20.06■□□□□ 0.8
SMN2-216ENST00000638794 PGK1P00558 417 aa20.06■□□□□ 0.8
SMN2-216ENST00000638794 SLC3A2P08195 630 aaKnown RBP20.06■□□□□ 0.8
SMN2-216ENST00000638794 AKR1A1P14550 325 aa20.06■□□□□ 0.8
SMN2-216ENST00000638794 TFAP4Q01664 338 aa20.06■□□□□ 0.8
SMN2-216ENST00000638794 LENG1Q96BZ8 264 aaPredicted RBP20.06■□□□□ 0.8
SMN2-216ENST00000638794 DDX11Q96FC9 970 aa20.06■□□□□ 0.8
SMN2-216ENST00000638794 RAVER2Q9HCJ3 691 aaKnown RBP20.06■□□□□ 0.8
SMN2-216ENST00000638794 PRDM5Q9NQX1 630 aaPredicted RBP20.06■□□□□ 0.8
SMN2-216ENST00000638794 FEM1BQ9UK73 627 aa20.06■□□□□ 0.8
SMN2-216ENST00000638794 PHF24Q9UPV7 400 aa20.06■□□□□ 0.8
SMN2-216ENST00000638794 CNPY2Q9Y2B0 182 aa20.06■□□□□ 0.8
SMN2-216ENST00000638794 CTDP1Q9Y5B0 961 aaPredicted RBP20.06■□□□□ 0.8
SMN2-216ENST00000638794 DNAJC25-GNG10A0A024R161 153 aa20.05■□□□□ 0.8
SMN2-216ENST00000638794 FOXP2O15409 715 aa20.05■□□□□ 0.8
SMN2-216ENST00000638794 SLFN13Q68D06 897 aa20.05■□□□□ 0.8
SMN2-216ENST00000638794 CCDC129Q6ZRS4 1044 aa20.05■□□□□ 0.8
SMN2-216ENST00000638794 RNF180Q86T96 592 aa20.05■□□□□ 0.8
SMN2-216ENST00000638794 MSL3Q8N5Y2 521 aaKnown RBP20.05■□□□□ 0.8
SMN2-216ENST00000638794 A0A0C4DFX4 3053 aa20.05■□□□□ 0.8
SMN2-216ENST00000638794 SYNGAP1Q96PV0 1343 aa20.04■□□□□ 0.8
SMN2-216ENST00000638794 SNAI1O95863 264 aaPredicted RBP20.04■□□□□ 0.8
SMN2-216ENST00000638794 BMP3P12645 472 aa20.04■□□□□ 0.8
SMN2-216ENST00000638794 C1orf53Q5VUE5 145 aa20.04■□□□□ 0.8
SMN2-216ENST00000638794 MAMDC4Q6UXC1 1216 aa20.04■□□□□ 0.8
SMN2-216ENST00000638794 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.04■□□□□ 0.8
SMN2-216ENST00000638794 CRBNQ96SW2 442 aa20.04■□□□□ 0.8
SMN2-216ENST00000638794 PDLIM7Q9NR12 457 aa20.04■□□□□ 0.8
SMN2-216ENST00000638794 ADAMTS4O75173 837 aa20.03■□□□□ 0.8
SMN2-216ENST00000638794 ANKRD45Q5TZF3 282 aa20.03■□□□□ 0.8
SMN2-216ENST00000638794 SH3RF1Q7Z6J0 888 aa20.03■□□□□ 0.8
SMN2-216ENST00000638794 ANKRD35Q8N283 1001 aa20.03■□□□□ 0.8
SMN2-216ENST00000638794 MTMR10Q9NXD2 777 aa20.03■□□□□ 0.8
SMN2-216ENST00000638794 A0A1W2PQ45 241 aaPredicted RBP20.02■□□□□ 0.8
SMN2-216ENST00000638794 A0A1W2PQY0 241 aa20.02■□□□□ 0.8
SMN2-216ENST00000638794 TMEM232C9JQI7 657 aa20.02■□□□□ 0.8
SMN2-216ENST00000638794 OAZ1P54368 228 aa20.02■□□□□ 0.8
SMN2-216ENST00000638794 TLE2Q04725 743 aa20.02■□□□□ 0.8
SMN2-216ENST00000638794 CTDSPL2Q05D32 466 aa20.02■□□□□ 0.8
SMN2-216ENST00000638794 ZNF467Q7Z7K2 595 aaPredicted RBP20.02■□□□□ 0.8
SMN2-216ENST00000638794 CHST13Q8NET6 341 aa20.02■□□□□ 0.8
SMN2-216ENST00000638794 BADQ92934 168 aa20.02■□□□□ 0.8
SMN2-216ENST00000638794 FGD4Q96M96 766 aa20.02■□□□□ 0.8
SMN2-216ENST00000638794 INCENPQ9NQS7 918 aa20.02■□□□□ 0.8
SMN2-216ENST00000638794 ZBTB47Q9UFB7 747 aaPredicted RBP20.02■□□□□ 0.8
SMN2-216ENST00000638794 ZHX1Q9UKY1 873 aaPredicted RBP20.02■□□□□ 0.8
SMN2-216ENST00000638794 ISY1Q9ULR0 285 aaKnown RBP20.02■□□□□ 0.8
SMN2-216ENST00000638794 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.02■□□□□ 0.8
SMN2-216ENST00000638794 SYNRGQ9UMZ2 1314 aa20.02■□□□□ 0.79
SMN2-216ENST00000638794 CDH23Q9H251 3354 aa20.01■□□□□ 0.79
SMN2-216ENST00000638794 TRIM43BA6NCK2 446 aa20.01■□□□□ 0.79
SMN2-216ENST00000638794 STAT2P52630 851 aa20.01■□□□□ 0.79
SMN2-216ENST00000638794 VPS53Q5VIR6 699 aa20.01■□□□□ 0.79
SMN2-216ENST00000638794 SLC17A8Q8NDX2 589 aa20.01■□□□□ 0.79
SMN2-216ENST00000638794 TRIM43Q96BQ3 446 aaPredicted RBP20.01■□□□□ 0.79
SMN2-216ENST00000638794 CHMP4CQ96CF2 233 aa20.01■□□□□ 0.79
SMN2-216ENST00000638794 EVI5LQ96CN4 794 aa20.01■□□□□ 0.79
SMN2-216ENST00000638794 GMCL1Q96IK5 515 aa20.01■□□□□ 0.79
SMN2-216ENST00000638794 HOMER2Q9NSB8 354 aa20.01■□□□□ 0.79
SMN2-216ENST00000638794 FBXO40Q9UH90 709 aa20.01■□□□□ 0.79
SMN2-216ENST00000638794 FAM184BQ9ULE4 1060 aa20.01■□□□□ 0.79
SMN2-216ENST00000638794 STX8Q9UNK0 236 aa20.01■□□□□ 0.79
SMN2-216ENST00000638794 UNC80Q8N2C7 3258 aa20■□□□□ 0.79
SMN2-216ENST00000638794 SLC1A4P43007 532 aa20■□□□□ 0.79
SMN2-216ENST00000638794 IL17RBQ9NRM6 502 aa20■□□□□ 0.79
SMN2-216ENST00000638794 CDKN2AIPQ9NXV6 580 aaPredicted RBP20■□□□□ 0.79
SMN2-216ENST00000638794 TACC3Q9Y6A5 838 aa20■□□□□ 0.79
SMN2-216ENST00000638794 TSPY2A6NKD2 308 aa19.99■□□□□ 0.79
SMN2-216ENST00000638794 NMT2O60551 498 aa19.99■□□□□ 0.79
SMN2-216ENST00000638794 FDX1P10109 184 aa19.99■□□□□ 0.79
SMN2-216ENST00000638794 MCCP23508 829 aa19.99■□□□□ 0.79
SMN2-216ENST00000638794 PDE1AP54750 535 aa19.99■□□□□ 0.79
SMN2-216ENST00000638794 IKQ13123 557 aaPredicted RBP19.99■□□□□ 0.79
SMN2-216ENST00000638794 HDAC1Q13547 482 aaPredicted RBP19.99■□□□□ 0.79
SMN2-216ENST00000638794 ACVR2BQ13705 512 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms