RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CACTINQ8WUQ7 758 aaKnown RBP20.35■□□□□ 0.85
SCARB2-213ENST00000638680 A0A1W2PQ27 194 aa20.34■□□□□ 0.85
SCARB2-213ENST00000638680 A0A1W2PQ64 194 aa20.34■□□□□ 0.85
SCARB2-213ENST00000638680 A0A1W2PQD8 194 aa20.34■□□□□ 0.85
SCARB2-213ENST00000638680 KCNA6P17658 529 aa20.34■□□□□ 0.85
SCARB2-213ENST00000638680 CTAGE3PQ8IX95 158 aa20.34■□□□□ 0.85
SCARB2-213ENST00000638680 RRP15Q9Y3B9 282 aaKnown RBP20.34■□□□□ 0.85
SCARB2-213ENST00000638680 CLTAP09496 248 aa20.34■□□□□ 0.85
SCARB2-213ENST00000638680 SLC8A1P32418 973 aa20.34■□□□□ 0.85
SCARB2-213ENST00000638680 SNCBQ16143 134 aa20.34■□□□□ 0.85
SCARB2-213ENST00000638680 ECM2O94769 699 aaPredicted RBP20.34■□□□□ 0.85
SCARB2-213ENST00000638680 CFBP00751 764 aa20.34■□□□□ 0.85
SCARB2-213ENST00000638680 SLC39A2Q9NP94 309 aa20.34■□□□□ 0.85
SCARB2-213ENST00000638680 ZNF496Q96IT1 587 aaPredicted RBP20.34■□□□□ 0.85
SCARB2-213ENST00000638680 PANK4Q9NVE7 773 aa20.34■□□□□ 0.85
SCARB2-213ENST00000638680 ATP8B1O43520 1251 aa20.33■□□□□ 0.85
SCARB2-213ENST00000638680 DKC1O60832 514 aaKnown RBP eCLIP20.33■□□□□ 0.85
SCARB2-213ENST00000638680 CERS3Q8IU89 383 aa20.33■□□□□ 0.85
SCARB2-213ENST00000638680 GBP7Q8N8V2 638 aaPredicted RBP20.33■□□□□ 0.85
SCARB2-213ENST00000638680 VPS41P49754 854 aa20.33■□□□□ 0.85
SCARB2-213ENST00000638680 DPCR1Q3MIW9 517 aa20.33■□□□□ 0.85
SCARB2-213ENST00000638680 ARPP21Q9UBL0 812 aaPredicted RBP20.33■□□□□ 0.85
SCARB2-213ENST00000638680 RBL2Q08999 1139 aa20.33■□□□□ 0.85
SCARB2-213ENST00000638680 TRAPPC3LQ5T215 181 aa20.33■□□□□ 0.85
SCARB2-213ENST00000638680 ANKRD13CQ8N6S4 541 aa20.33■□□□□ 0.85
SCARB2-213ENST00000638680 GRK7Q8WTQ7 553 aa20.33■□□□□ 0.85
SCARB2-213ENST00000638680 RSAD2Q8WXG1 361 aa20.33■□□□□ 0.85
SCARB2-213ENST00000638680 ARHGAP42A6NI28 874 aa20.33■□□□□ 0.84
SCARB2-213ENST00000638680 FGAP02671 866 aa20.33■□□□□ 0.84
SCARB2-213ENST00000638680 KRT19P08727 400 aa20.33■□□□□ 0.84
SCARB2-213ENST00000638680 MAN1A1P33908 653 aa20.33■□□□□ 0.84
SCARB2-213ENST00000638680 PPP2R5EQ16537 467 aa20.33■□□□□ 0.84
SCARB2-213ENST00000638680 UNC5CLQ8IV45 518 aa20.33■□□□□ 0.84
SCARB2-213ENST00000638680 MYCBPQ99417 103 aaPredicted RBP20.33■□□□□ 0.84
SCARB2-213ENST00000638680 A0A087WWV3 80 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 IFNB1P01574 187 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 CAPN12Q6ZSI9 719 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 KSR1Q8IVT5 923 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 PCDHA5Q9Y5H7 936 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 PHLPP2Q6ZVD8 1323 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 RASSF7Q02833 373 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 PPP2R5CQ13362 524 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 C19orf44Q9H6X5 657 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 USP17L12C9JPN9 530 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 USP17L21D6R901 530 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 KCNQ3O43525 872 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 RFC1P35251 1148 aaPredicted RBP20.32■□□□□ 0.84
SCARB2-213ENST00000638680 SESN3P58005 492 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 APBA1Q02410 837 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 PHLDB3Q6NSJ2 640 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 GPKOWQ92917 476 aaPredicted RBP eCLIP20.32■□□□□ 0.84
SCARB2-213ENST00000638680 ANTXR1Q9H6X2 564 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 THAP12O43422 761 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 TNKSO95271 1327 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 MAP4K1Q92918 833 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 C8orf37Q96NL8 207 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 ARMCX3Q9UH62 379 aaPredicted RBP20.32■□□□□ 0.84
SCARB2-213ENST00000638680 FAN1Q9Y2M0 1017 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 KIAA0556O60303 1618 aa20.32■□□□□ 0.84
SCARB2-213ENST00000638680 TNNI1P19237 187 aa20.31■□□□□ 0.84
SCARB2-213ENST00000638680 BICRAQ9NZM4 1560 aa20.31■□□□□ 0.84
SCARB2-213ENST00000638680 ZMYND10O75800 440 aa20.31■□□□□ 0.84
SCARB2-213ENST00000638680 OR52Z1P0C646 297 aa20.31■□□□□ 0.84
SCARB2-213ENST00000638680 EHHADHQ08426 723 aa20.31■□□□□ 0.84
SCARB2-213ENST00000638680 RAB20Q9NX57 234 aa20.31■□□□□ 0.84
SCARB2-213ENST00000638680 MED23Q9ULK4 1368 aa20.31■□□□□ 0.84
SCARB2-213ENST00000638680 PHBP35232 272 aa20.31■□□□□ 0.84
SCARB2-213ENST00000638680 RIC8AQ9NPQ8 531 aa20.31■□□□□ 0.84
SCARB2-213ENST00000638680 BAG2O95816 211 aa20.31■□□□□ 0.84
SCARB2-213ENST00000638680 PTGDRQ13258 359 aa20.31■□□□□ 0.84
SCARB2-213ENST00000638680 FNBP4Q8N3X1 1017 aaPredicted RBP20.31■□□□□ 0.84
SCARB2-213ENST00000638680 FBXO18Q8NFZ0 1043 aa20.31■□□□□ 0.84
SCARB2-213ENST00000638680 SDR42E1Q8WUS8 393 aa20.31■□□□□ 0.84
SCARB2-213ENST00000638680 ATP2A3Q93084 1043 aa20.31■□□□□ 0.84
SCARB2-213ENST00000638680 SCG2P13521 617 aa20.3■□□□□ 0.84
SCARB2-213ENST00000638680 BSPRYQ5W0U4 402 aa20.3■□□□□ 0.84
SCARB2-213ENST00000638680 CDAN1Q8IWY9 1227 aa20.3■□□□□ 0.84
SCARB2-213ENST00000638680 STAP2Q9UGK3 403 aa20.3■□□□□ 0.84
SCARB2-213ENST00000638680 KDM5AP29375 1690 aaKnown RBP20.3■□□□□ 0.84
SCARB2-213ENST00000638680 FRMD3A2A2Y4 597 aa20.3■□□□□ 0.84
SCARB2-213ENST00000638680 GIPC1O14908 333 aa20.3■□□□□ 0.84
SCARB2-213ENST00000638680 GABPB2Q8TAK5 448 aaPredicted RBP20.3■□□□□ 0.84
SCARB2-213ENST00000638680 NAA35Q5VZE5 725 aa20.3■□□□□ 0.84
SCARB2-213ENST00000638680 MAST3O60307 1309 aa20.3■□□□□ 0.84
SCARB2-213ENST00000638680 IFT88Q13099 833 aa20.3■□□□□ 0.84
SCARB2-213ENST00000638680 STAG1Q8WVM7 1258 aa20.3■□□□□ 0.84
SCARB2-213ENST00000638680 JDP2Q8WYK2 163 aa20.3■□□□□ 0.84
SCARB2-213ENST00000638680 CNOT6LQ96LI5 555 aaKnown RBP20.3■□□□□ 0.84
SCARB2-213ENST00000638680 ATP8A2Q9NTI2 1148 aa20.3■□□□□ 0.84
SCARB2-213ENST00000638680 ABCC10Q5T3U5 1492 aa20.3■□□□□ 0.84
SCARB2-213ENST00000638680 PDE6AP16499 860 aa20.29■□□□□ 0.84
SCARB2-213ENST00000638680 SLC39A14Q15043 492 aa20.29■□□□□ 0.84
SCARB2-213ENST00000638680 TAF12Q16514 161 aa20.29■□□□□ 0.84
SCARB2-213ENST00000638680 EEF2KMTQ96G04 330 aa20.29■□□□□ 0.84
SCARB2-213ENST00000638680 BTG4Q9NY30 223 aa20.29■□□□□ 0.84
SCARB2-213ENST00000638680 PPP6R2O75170 966 aa20.29■□□□□ 0.84
SCARB2-213ENST00000638680 TCP10Q12799 353 aa20.29■□□□□ 0.84
SCARB2-213ENST00000638680 PDE1CQ14123 709 aaPredicted RBP20.29■□□□□ 0.84
SCARB2-213ENST00000638680 CARMIL3Q8ND23 1372 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms