RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 SNAP25P60880 206 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 MB21D2Q8IYB1 491 aaPredicted RBP25.59■■□□□ 1.69
SCN1B-206ENST00000638536 DCAF4Q8WV16 495 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 RIPK3Q9Y572 518 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 SNHG28P0DPA3 235 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 STAT3P40763 770 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 SOX10P56693 466 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 CCDC96Q2M329 555 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 NCAPG2Q86XI2 1143 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 CPXCR1Q8N123 301 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 PNMA1Q8ND90 353 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 UBAC1Q9BSL1 405 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 SLC38A10Q9HBR0 1119 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 GPCPD1Q9NPB8 672 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 PTPREP23469 700 aa25.58■■□□□ 1.69
SCN1B-206ENST00000638536 MTFR1Q15390 333 aa25.58■■□□□ 1.69
SCN1B-206ENST00000638536 RASEFQ8IZ41 740 aa25.58■■□□□ 1.69
SCN1B-206ENST00000638536 NUDT12Q9BQG2 462 aa25.58■■□□□ 1.69
SCN1B-206ENST00000638536 RAVER2Q9HCJ3 691 aaKnown RBP25.58■■□□□ 1.69
SCN1B-206ENST00000638536 GOLGA8HP0CJ92 632 aa25.57■■□□□ 1.68
SCN1B-206ENST00000638536 IKQ13123 557 aaPredicted RBP25.57■■□□□ 1.68
SCN1B-206ENST00000638536 CCDC178Q5BJE1 867 aa25.57■■□□□ 1.68
SCN1B-206ENST00000638536 RALYLQ86SE5 291 aaKnown RBP25.57■■□□□ 1.68
SCN1B-206ENST00000638536 RIOX2Q8IUF8 465 aa25.57■■□□□ 1.68
SCN1B-206ENST00000638536 SHCBP1Q8NEM2 672 aa25.57■■□□□ 1.68
SCN1B-206ENST00000638536 GPHNQ9NQX3 736 aaPredicted RBP25.57■■□□□ 1.68
SCN1B-206ENST00000638536 PRR12Q9ULL5 1215 aa25.57■■□□□ 1.68
SCN1B-206ENST00000638536 PLA2G6O60733 806 aa25.56■■□□□ 1.68
SCN1B-206ENST00000638536 ZNF543Q08ER8 600 aa25.56■■□□□ 1.68
SCN1B-206ENST00000638536 TRIM32Q13049 653 aa25.56■■□□□ 1.68
SCN1B-206ENST00000638536 CCL14Q16627 93 aa25.56■■□□□ 1.68
SCN1B-206ENST00000638536 FAM160B2Q86V87 743 aa25.56■■□□□ 1.68
SCN1B-206ENST00000638536 CHURC1Q8WUH1 139 aa25.56■■□□□ 1.68
SCN1B-206ENST00000638536 CPVLQ9H3G5 476 aa25.56■■□□□ 1.68
SCN1B-206ENST00000638536 KAT14Q9H8E8 782 aa25.56■■□□□ 1.68
SCN1B-206ENST00000638536 CWC22Q9HCG8 908 aaKnown RBP25.56■■□□□ 1.68
SCN1B-206ENST00000638536 SLC4A3P48751 1232 aa25.55■■□□□ 1.68
SCN1B-206ENST00000638536 GRB14Q14449 540 aa25.55■■□□□ 1.68
SCN1B-206ENST00000638536 IFIT1BQ5T764 474 aaKnown RBP25.55■■□□□ 1.68
SCN1B-206ENST00000638536 SNRNP48Q6IEG0 339 aaKnown RBP25.55■■□□□ 1.68
SCN1B-206ENST00000638536 NBPF11Q86T75 865 aa25.55■■□□□ 1.68
SCN1B-206ENST00000638536 SLAIN1Q8ND83 568 aa25.55■■□□□ 1.68
SCN1B-206ENST00000638536 PXYLP1Q8TE99 480 aa25.55■■□□□ 1.68
SCN1B-206ENST00000638536 TRIB2Q92519 343 aa25.55■■□□□ 1.68
SCN1B-206ENST00000638536 BAZ2BQ9UIF8 2168 aaKnown RBP25.55■■□□□ 1.68
SCN1B-206ENST00000638536 ZNF536O15090 1300 aa25.55■■□□□ 1.68
SCN1B-206ENST00000638536 IFIT3O14879 490 aaKnown RBP25.55■■□□□ 1.68
SCN1B-206ENST00000638536 ZBED4O75132 1171 aa25.55■■□□□ 1.68
SCN1B-206ENST00000638536 TAL1P17542 331 aaPredicted RBP25.55■■□□□ 1.68
SCN1B-206ENST00000638536 MAP2K5Q13163 448 aa25.55■■□□□ 1.68
SCN1B-206ENST00000638536 SOCS4Q8WXH5 440 aa25.55■■□□□ 1.68
SCN1B-206ENST00000638536 POTEFA5A3E0 1075 aa25.54■■□□□ 1.68
SCN1B-206ENST00000638536 BTNL9Q6UXG8 535 aa25.54■■□□□ 1.68
SCN1B-206ENST00000638536 NPLOC4Q8TAT6 608 aa25.54■■□□□ 1.68
SCN1B-206ENST00000638536 IGDCC4Q8TDY8 1250 aa25.54■■□□□ 1.68
SCN1B-206ENST00000638536 TEX13BQ9BXU2 312 aa25.54■■□□□ 1.68
SCN1B-206ENST00000638536 MROH8Q9H579 483 aa25.54■■□□□ 1.68
SCN1B-206ENST00000638536 FLRT1Q9NZU1 646 aa25.54■■□□□ 1.68
SCN1B-206ENST00000638536 BIN2Q9UBW5 565 aaPredicted RBP25.54■■□□□ 1.68
SCN1B-206ENST00000638536 SLC15A5A6NIM6 579 aa25.53■■□□□ 1.68
SCN1B-206ENST00000638536 ATP2A1O14983 1001 aa25.53■■□□□ 1.68
SCN1B-206ENST00000638536 SLC25A27O95847 323 aa25.53■■□□□ 1.68
SCN1B-206ENST00000638536 INHAP05111 366 aa25.53■■□□□ 1.68
SCN1B-206ENST00000638536 ADORA2AP29274 412 aa25.53■■□□□ 1.68
SCN1B-206ENST00000638536 ADCK5Q3MIX3 580 aa25.53■■□□□ 1.68
SCN1B-206ENST00000638536 AGBL1Q96MI9 1066 aa25.53■■□□□ 1.68
SCN1B-206ENST00000638536 IVNS1ABPQ9Y6Y0 642 aa25.53■■□□□ 1.68
SCN1B-206ENST00000638536 PLXNA1Q9UIW2 1896 aa25.52■■□□□ 1.68
SCN1B-206ENST00000638536 COBLO75128 1261 aa25.52■■□□□ 1.68
SCN1B-206ENST00000638536 CCDC174Q6PII3 467 aa25.52■■□□□ 1.68
SCN1B-206ENST00000638536 UBA5Q9GZZ9 404 aa25.52■■□□□ 1.68
SCN1B-206ENST00000638536 ZNF236Q9UL36 1845 aa25.52■■□□□ 1.68
SCN1B-206ENST00000638536 XRCC5P13010 732 aaKnown RBP25.52■■□□□ 1.68
SCN1B-206ENST00000638536 RGS2P41220 211 aa25.52■■□□□ 1.68
SCN1B-206ENST00000638536 SYDE2Q5VT97 1194 aa25.52■■□□□ 1.68
SCN1B-206ENST00000638536 RBBP6Q7Z6E9 1792 aaKnown RBP25.51■■□□□ 1.67
SCN1B-206ENST00000638536 PRC1O43663 620 aa25.51■■□□□ 1.67
SCN1B-206ENST00000638536 STAG2Q8N3U4 1231 aa25.51■■□□□ 1.67
SCN1B-206ENST00000638536 LRRC2Q9BYS8 371 aa25.51■■□□□ 1.67
SCN1B-206ENST00000638536 CTDP1Q9Y5B0 961 aaPredicted RBP25.51■■□□□ 1.67
SCN1B-206ENST00000638536 MYH6P13533 1939 aa25.5■■□□□ 1.67
SCN1B-206ENST00000638536 STRNO43815 780 aa25.5■■□□□ 1.67
SCN1B-206ENST00000638536 PGK2P07205 417 aa25.5■■□□□ 1.67
SCN1B-206ENST00000638536 WTAPQ15007 396 aa25.5■■□□□ 1.67
SCN1B-206ENST00000638536 TMEM67Q5HYA8 995 aa25.5■■□□□ 1.67
SCN1B-206ENST00000638536 APBA2Q99767 749 aa25.5■■□□□ 1.67
SCN1B-206ENST00000638536 UNC93B1Q9H1C4 597 aa25.5■■□□□ 1.67
SCN1B-206ENST00000638536 RANBP17Q9H2T7 1088 aaKnown RBP25.5■■□□□ 1.67
SCN1B-206ENST00000638536 LY9Q9HBG7 655 aa25.5■■□□□ 1.67
SCN1B-206ENST00000638536 TSGA10IPQ3SY00 556 aa25.49■■□□□ 1.67
SCN1B-206ENST00000638536 RNF20Q5VTR2 975 aa25.49■■□□□ 1.67
SCN1B-206ENST00000638536 HOMER2Q9NSB8 354 aa25.49■■□□□ 1.67
SCN1B-206ENST00000638536 TNRC18O15417 2968 aaPredicted RBP25.49■■□□□ 1.67
SCN1B-206ENST00000638536 HOXC6P09630 235 aa25.48■■□□□ 1.67
SCN1B-206ENST00000638536 FDX1P10109 184 aa25.48■■□□□ 1.67
SCN1B-206ENST00000638536 FCER1AP12319 257 aa25.48■■□□□ 1.67
SCN1B-206ENST00000638536 CCL5P13501 91 aa25.48■■□□□ 1.67
SCN1B-206ENST00000638536 MCM5P33992 734 aa25.48■■□□□ 1.67
SCN1B-206ENST00000638536 HSPA4P34932 840 aa25.48■■□□□ 1.67
SCN1B-206ENST00000638536 OAZ1P54368 228 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms