RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 LAMA4Q16363 1823 aa21■□□□□ 0.95
PNKP-230ENST00000638016 STRNO43815 780 aa21■□□□□ 0.95
PNKP-230ENST00000638016 FGRP09769 529 aa21■□□□□ 0.95
PNKP-230ENST00000638016 FCER1AP12319 257 aa21■□□□□ 0.95
PNKP-230ENST00000638016 CYBAP13498 195 aa21■□□□□ 0.95
PNKP-230ENST00000638016 MCCP23508 829 aa21■□□□□ 0.95
PNKP-230ENST00000638016 CNGA1P29973 690 aa21■□□□□ 0.95
PNKP-230ENST00000638016 ANO1Q5XXA6 986 aa21■□□□□ 0.95
PNKP-230ENST00000638016 SNRNP48Q6IEG0 339 aaKnown RBP21■□□□□ 0.95
PNKP-230ENST00000638016 DIAPH3Q9NSV4 1193 aa21■□□□□ 0.95
PNKP-230ENST00000638016 PFASO15067 1338 aa21■□□□□ 0.95
PNKP-230ENST00000638016 TRIOBPQ9H2D6 2365 aa20.99■□□□□ 0.95
PNKP-230ENST00000638016 SLC25A27O95847 323 aa20.99■□□□□ 0.95
PNKP-230ENST00000638016 BMP3P12645 472 aa20.99■□□□□ 0.95
PNKP-230ENST00000638016 SNAP25P60880 206 aa20.99■□□□□ 0.95
PNKP-230ENST00000638016 KCTD1Q719H9 257 aa20.99■□□□□ 0.95
PNKP-230ENST00000638016 NECAB2Q7Z6G3 386 aa20.99■□□□□ 0.95
PNKP-230ENST00000638016 PRPF38AQ8NAV1 312 aaKnown RBP20.99■□□□□ 0.95
PNKP-230ENST00000638016 MAML3Q96JK9 1138 aa20.99■□□□□ 0.95
PNKP-230ENST00000638016 ZMYM6O95789 1325 aa20.99■□□□□ 0.95
PNKP-230ENST00000638016 NEDD4P46934 1319 aa20.99■□□□□ 0.95
PNKP-230ENST00000638016 TMEM232C9JQI7 657 aa20.98■□□□□ 0.95
PNKP-230ENST00000638016 TAL1P17542 331 aaPredicted RBP20.98■□□□□ 0.95
PNKP-230ENST00000638016 OLFML2BQ68BL8 750 aa20.98■□□□□ 0.95
PNKP-230ENST00000638016 ABRAQ8N0Z2 381 aa20.98■□□□□ 0.95
PNKP-230ENST00000638016 ANKLE1Q8NAG6 615 aa20.98■□□□□ 0.95
PNKP-230ENST00000638016 TEX13BQ9BXU2 312 aa20.98■□□□□ 0.95
PNKP-230ENST00000638016 SLC38A10Q9HBR0 1119 aa20.98■□□□□ 0.95
PNKP-230ENST00000638016 DDX20Q9UHI6 824 aaKnown RBP20.98■□□□□ 0.95
PNKP-230ENST00000638016 FEM1BQ9UK73 627 aa20.98■□□□□ 0.95
PNKP-230ENST00000638016 SYNPO2Q9UMS6 1093 aa20.98■□□□□ 0.95
PNKP-230ENST00000638016 COLQQ9Y215 455 aaPredicted RBP20.98■□□□□ 0.95
PNKP-230ENST00000638016 SMCHD1A6NHR9 2005 aa20.97■□□□□ 0.95
PNKP-230ENST00000638016 SLC1A4P43007 532 aa20.97■□□□□ 0.95
PNKP-230ENST00000638016 TTC22Q5TAA0 569 aa20.97■□□□□ 0.95
PNKP-230ENST00000638016 TICAM2Q86XR7 235 aa20.97■□□□□ 0.95
PNKP-230ENST00000638016 C11orf49Q9H6J7 331 aa20.97■□□□□ 0.95
PNKP-230ENST00000638016 ZBED4O75132 1171 aa20.96■□□□□ 0.95
PNKP-230ENST00000638016 NOVP48745 357 aa20.96■□□□□ 0.95
PNKP-230ENST00000638016 KCTD2Q14681 263 aa20.96■□□□□ 0.95
PNKP-230ENST00000638016 ZNF792Q3KQV3 632 aa20.96■□□□□ 0.95
PNKP-230ENST00000638016 GMCL1Q96IK5 515 aa20.96■□□□□ 0.95
PNKP-230ENST00000638016 RANBP2P49792 3224 aaKnown RBP20.96■□□□□ 0.95
PNKP-230ENST00000638016 MCM3APO60318 1980 aa20.96■□□□□ 0.95
PNKP-230ENST00000638016 EVI5O60447 810 aa20.95■□□□□ 0.94
PNKP-230ENST00000638016 STAT2P52630 851 aa20.95■□□□□ 0.94
PNKP-230ENST00000638016 IKQ13123 557 aaPredicted RBP20.95■□□□□ 0.94
PNKP-230ENST00000638016 HABP4Q5JVS0 413 aaKnown RBP20.95■□□□□ 0.94
PNKP-230ENST00000638016 AKNAD1Q5T1N1 836 aa20.95■□□□□ 0.94
PNKP-230ENST00000638016 CHRDL2Q6WN34 429 aa20.95■□□□□ 0.94
PNKP-230ENST00000638016 C7orf61Q8IZ16 206 aa20.95■□□□□ 0.94
PNKP-230ENST00000638016 STAG1Q8WVM7 1258 aa20.95■□□□□ 0.94
PNKP-230ENST00000638016 HOMER2Q9NSB8 354 aa20.95■□□□□ 0.94
PNKP-230ENST00000638016 ATP2A1O14983 1001 aa20.94■□□□□ 0.94
PNKP-230ENST00000638016 TTBK2Q6IQ55 1244 aa20.94■□□□□ 0.94
PNKP-230ENST00000638016 TMEM47Q9BQJ4 181 aa20.94■□□□□ 0.94
PNKP-230ENST00000638016 ZKSCAN3Q9BRR0 538 aa20.94■□□□□ 0.94
PNKP-230ENST00000638016 CTDP1Q9Y5B0 961 aaPredicted RBP20.94■□□□□ 0.94
PNKP-230ENST00000638016 ZNF536O15090 1300 aa20.94■□□□□ 0.94
PNKP-230ENST00000638016 FRMPD2Q68DX3 1309 aaPredicted RBP20.94■□□□□ 0.94
PNKP-230ENST00000638016 SLC34A2O95436 690 aa20.93■□□□□ 0.94
PNKP-230ENST00000638016 COL6A1P12109 1028 aa20.93■□□□□ 0.94
PNKP-230ENST00000638016 SLC16A2P36021 539 aa20.93■□□□□ 0.94
PNKP-230ENST00000638016 MFAP1P55081 439 aaKnown RBP20.93■□□□□ 0.94
PNKP-230ENST00000638016 CCDC96Q2M329 555 aa20.93■□□□□ 0.94
PNKP-230ENST00000638016 RCSD1Q6JBY9 416 aa20.93■□□□□ 0.94
PNKP-230ENST00000638016 CCDC174Q6PII3 467 aa20.93■□□□□ 0.94
PNKP-230ENST00000638016 MFSD6Q6ZSS7 791 aa20.93■□□□□ 0.94
PNKP-230ENST00000638016 SKAP1Q86WV1 359 aa20.93■□□□□ 0.94
PNKP-230ENST00000638016 LENG1Q96BZ8 264 aaPredicted RBP20.93■□□□□ 0.94
PNKP-230ENST00000638016 AGBL1Q96MI9 1066 aa20.93■□□□□ 0.94
PNKP-230ENST00000638016 SLC5A4Q9NY91 659 aa20.93■□□□□ 0.94
PNKP-230ENST00000638016 CAPN2P17655 700 aa20.92■□□□□ 0.94
PNKP-230ENST00000638016 COPB2P35606 906 aa20.92■□□□□ 0.94
PNKP-230ENST00000638016 FGD4Q96M96 766 aa20.92■□□□□ 0.94
PNKP-230ENST00000638016 PRR12Q9ULL5 1215 aa20.92■□□□□ 0.94
PNKP-230ENST00000638016 ZMYND8Q9ULU4 1186 aaPredicted RBP20.92■□□□□ 0.94
PNKP-230ENST00000638016 DNAJC25-GNG10A0A024R161 153 aa20.91■□□□□ 0.94
PNKP-230ENST00000638016 HIP1O00291 1037 aa20.91■□□□□ 0.94
PNKP-230ENST00000638016 ZNF213O14771 459 aa20.91■□□□□ 0.94
PNKP-230ENST00000638016 LRRC26Q2I0M4 334 aa20.91■□□□□ 0.94
PNKP-230ENST00000638016 GJC2Q5T442 439 aaPredicted RBP20.91■□□□□ 0.94
PNKP-230ENST00000638016 FAM160B2Q86V87 743 aa20.91■□□□□ 0.94
PNKP-230ENST00000638016 TINF2Q9BSI4 451 aa20.91■□□□□ 0.94
PNKP-230ENST00000638016 TCP11L1Q9NUJ3 509 aa20.91■□□□□ 0.94
PNKP-230ENST00000638016 NR2E3Q9Y5X4 410 aa20.91■□□□□ 0.94
PNKP-230ENST00000638016 B4E1Z4 1266 aa20.9■□□□□ 0.94
PNKP-230ENST00000638016 SEPT4O43236 478 aa20.9■□□□□ 0.94
PNKP-230ENST00000638016 MYCNP04198 464 aaPredicted RBP20.9■□□□□ 0.94
PNKP-230ENST00000638016 TOP1P11387 765 aaKnown RBP20.9■□□□□ 0.94
PNKP-230ENST00000638016 SYN1P17600 705 aa20.9■□□□□ 0.94
PNKP-230ENST00000638016 PPP4R3BQ5MIZ7 849 aa20.9■□□□□ 0.94
PNKP-230ENST00000638016 CHURC1Q8WUH1 139 aa20.9■□□□□ 0.94
PNKP-230ENST00000638016 DDX11Q96FC9 970 aa20.9■□□□□ 0.94
PNKP-230ENST00000638016 DSCC1Q9BVC3 393 aa20.9■□□□□ 0.94
PNKP-230ENST00000638016 GPCPD1Q9NPB8 672 aa20.9■□□□□ 0.94
PNKP-230ENST00000638016 RBM27Q9P2N5 1060 aaKnown RBP20.9■□□□□ 0.94
PNKP-230ENST00000638016 LCTP09848 1927 aa20.89■□□□□ 0.93
PNKP-230ENST00000638016 MSCO60682 206 aa20.89■□□□□ 0.93
PNKP-230ENST00000638016 KDM4AO75164 1064 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms