RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 CPXCR1Q8N123 301 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 ENAHQ8N8S7 591 aaPredicted RBP9.61□□□□□ -0.87
PNKP-226ENST00000636840 SOCS4Q8WXH5 440 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 ABHD8Q96I13 439 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 MOV10L1Q9BXT6 1211 aaKnown RBP9.61□□□□□ -0.87
PNKP-226ENST00000636840 TEX13BQ9BXU2 312 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 FBXO40Q9UH90 709 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 MYH4Q9Y623 1939 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 LOC285556D6RIA3 1793 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 CCDC85CA6NKD9 419 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 DHX16O60231 1041 aaKnown RBP9.6□□□□□ -0.87
PNKP-226ENST00000636840 ADCY3O60266 1144 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 CNMDO75829 334 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 CALM1P0DP23 149 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 CALM2P0DP24 149 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 CALM3P0DP25 149 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 PDHBP11177 359 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 ERCC3P19447 782 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 PTPREP23469 700 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 GRK4P32298 578 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 KIF5BP33176 963 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 HSPA4P34932 840 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 RGS2P41220 211 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 FLT3LGP49771 235 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 ZNF543Q08ER8 600 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 IRF5Q13568 498 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 KCTD2Q14681 263 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 TMEM132BQ14DG7 1078 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 SEC23AQ15436 765 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 TKFCQ3LXA3 575 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 SYDE2Q5VT97 1194 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 BTNL9Q6UXG8 535 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 DHX32Q7L7V1 743 aaKnown RBP9.6□□□□□ -0.87
PNKP-226ENST00000636840 CHST3Q7LGC8 479 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 GPR142Q7Z601 462 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 RIOX2Q8IUF8 465 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 MB21D2Q8IYB1 491 aaPredicted RBP9.6□□□□□ -0.87
PNKP-226ENST00000636840 ABRAQ8N0Z2 381 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 SLAIN1Q8ND83 568 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 PXYLP1Q8TE99 480 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 DDX11Q96FC9 970 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 TMEM106CQ9BVX2 250 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 SLC38A10Q9HBR0 1119 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 PRR12Q9ULL5 1215 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 HPS5Q9UPZ3 1129 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 PTCH2Q9Y6C5 1203 aa9.6□□□□□ -0.87
PNKP-226ENST00000636840 FRMPD2Q68DX3 1309 aaPredicted RBP9.59□□□□□ -0.87
PNKP-226ENST00000636840 ATP2A1O14983 1001 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 SNHG28P0DPA3 235 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 XRCC5P13010 732 aaKnown RBP9.59□□□□□ -0.87
PNKP-226ENST00000636840 CYP2B6P20813 491 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 LIFRP42702 1097 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 GNAQP50148 359 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 PRKCZQ05513 592 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 MAP2K5Q13163 448 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 SNRNP48Q6IEG0 339 aaKnown RBP9.59□□□□□ -0.87
PNKP-226ENST00000636840 BLOC1S2Q6QNY1 142 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 STOX1Q6ZVD7 989 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 CHST13Q8NET6 341 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 CTCFLQ8NI51 663 aaPredicted RBP9.59□□□□□ -0.87
PNKP-226ENST00000636840 IGDCC4Q8TDY8 1250 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 MAP3K14Q99558 947 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 USP26Q9BXU7 913 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 PORCNQ9H237 461 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 RAVER2Q9HCJ3 691 aaKnown RBP9.59□□□□□ -0.87
PNKP-226ENST00000636840 GJD2Q9UKL4 321 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 GABRQQ9UN88 632 aa9.59□□□□□ -0.87
PNKP-226ENST00000636840 WDR19Q8NEZ3 1342 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 GREB1LQ9C091 1923 aaPredicted RBP9.58□□□□□ -0.88
PNKP-226ENST00000636840 KLRF2D3W0D1 207 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 PEX10O60683 326 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 CAPN2P17655 700 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 CTGFP29279 349 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 SLC16A2P36021 539 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 MFSD14CQ5VZR4 134 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 TTBK2Q6IQ55 1244 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 CCDC174Q6PII3 467 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 ANKRD35Q8N283 1001 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 NUP133Q8WUM0 1156 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 KCNB2Q92953 911 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 JAKMIP1Q96N16 626 aaKnown RBP9.58□□□□□ -0.88
PNKP-226ENST00000636840 MMP19Q99542 508 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 LZTS2Q9BRK4 669 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 UBA5Q9GZZ9 404 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 VAT1LQ9HCJ6 419 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 ZNF214Q9UL59 606 aaPredicted RBP9.58□□□□□ -0.88
PNKP-226ENST00000636840 GTF3C3Q9Y5Q9 886 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 SNX14Q9Y5W7 946 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 SLC12A7Q9Y666 1083 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 TAF6LQ9Y6J9 622 aa9.58□□□□□ -0.88
PNKP-226ENST00000636840 DDAH1O94760 285 aa9.57□□□□□ -0.88
PNKP-226ENST00000636840 GOLGA8HP0CJ92 632 aa9.57□□□□□ -0.88
PNKP-226ENST00000636840 ALAS1P13196 640 aa9.57□□□□□ -0.88
PNKP-226ENST00000636840 ANTXR2P58335 489 aa9.57□□□□□ -0.88
PNKP-226ENST00000636840 EXOSC10Q01780 885 aaKnown RBP9.57□□□□□ -0.88
PNKP-226ENST00000636840 PPP2R5BQ15173 497 aa9.57□□□□□ -0.88
PNKP-226ENST00000636840 MORN1Q5T089 497 aa9.57□□□□□ -0.88
PNKP-226ENST00000636840 RASEFQ8IZ41 740 aa9.57□□□□□ -0.88
PNKP-226ENST00000636840 REPS2Q8NFH8 660 aa9.57□□□□□ -0.88
PNKP-226ENST00000636840 TRERF1Q96PN7 1200 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms