RNA–Protein interactions for RNA: ENST00000636803.1

AMT-238, Transcript of aminomethyltransferase, human

TSL 5

Gene AMT, Length 1,945 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AMT-238	ENST00000636803	TTF2	Q9UNY4	1162 aa	Known RBP	19.64	■□□□□ 0.74
AMT-238	ENST00000636803	PARP3	Q9Y6F1	533 aa		19.64	■□□□□ 0.74
AMT-238	ENST00000636803	MYO3B	Q8WXR4	1341 aa		19.64	■□□□□ 0.74
AMT-238	ENST00000636803	COL11A2	P13942	1736 aa	Predicted RBP	19.64	■□□□□ 0.73
AMT-238	ENST00000636803	PSD	A5PKW4	1024 aa	Predicted RBP	19.64	■□□□□ 0.73
AMT-238	ENST00000636803	PRPH	P41219	470 aa		19.64	■□□□□ 0.73
AMT-238	ENST00000636803	NAPA	P54920	295 aa		19.64	■□□□□ 0.73
AMT-238	ENST00000636803	HHIPL2	Q6UWX4	724 aa		19.64	■□□□□ 0.73
AMT-238	ENST00000636803	MAP7D2	Q96T17	732 aa		19.64	■□□□□ 0.73
AMT-238	ENST00000636803	MTMR4	Q9NYA4	1195 aa		19.64	■□□□□ 0.73
AMT-238	ENST00000636803	SEC63	Q9UGP8	760 aa	Known RBP	19.64	■□□□□ 0.73
AMT-238	ENST00000636803	SWAP70	Q9UH65	585 aa		19.64	■□□□□ 0.73
AMT-238	ENST00000636803	C10orf71	Q711Q0	1435 aa		19.63	■□□□□ 0.73
AMT-238	ENST00000636803	IGKV6D-41	A0A0C4DH26	115 aa		19.63	■□□□□ 0.73
AMT-238	ENST00000636803	TMEM232	C9JQI7	657 aa		19.63	■□□□□ 0.73
AMT-238	ENST00000636803	KIF2A	O00139	706 aa	Predicted RBP	19.63	■□□□□ 0.73
AMT-238	ENST00000636803	GNA11	P29992	359 aa		19.63	■□□□□ 0.73
AMT-238	ENST00000636803	TBX2	Q13207	712 aa	Predicted RBP	19.63	■□□□□ 0.73
AMT-238	ENST00000636803	PICALM	Q13492	652 aa		19.63	■□□□□ 0.73
AMT-238	ENST00000636803	INF2	Q27J81	1249 aa		19.63	■□□□□ 0.73
AMT-238	ENST00000636803	RIOX1	Q9H6W3	641 aa		19.63	■□□□□ 0.73
AMT-238	ENST00000636803	USP40	Q9NVE5	1235 aa		19.63	■□□□□ 0.73
AMT-238	ENST00000636803	MYH8	P13535	1937 aa		19.63	■□□□□ 0.73
AMT-238	ENST00000636803	PPP1R3G	B7ZBB8	358 aa		19.63	■□□□□ 0.73
AMT-238	ENST00000636803		F8W031	263 aa	Predicted RBP	19.63	■□□□□ 0.73
AMT-238	ENST00000636803	hCG_1984214	I3L0E3	225 aa		19.63	■□□□□ 0.73
AMT-238	ENST00000636803	MMP10	P09238	476 aa		19.63	■□□□□ 0.73
AMT-238	ENST00000636803	CD44	P16070	742 aa	Known RBP	19.63	■□□□□ 0.73
AMT-238	ENST00000636803	CASP1	P29466	404 aa		19.63	■□□□□ 0.73
AMT-238	ENST00000636803	RBM10	P98175	930 aa	Known RBP	19.63	■□□□□ 0.73
AMT-238	ENST00000636803	HSP90AA2P	Q14568	343 aa	Predicted RBP	19.63	■□□□□ 0.73
AMT-238	ENST00000636803	E4F1	Q66K89	784 aa	Predicted RBP	19.63	■□□□□ 0.73
AMT-238	ENST00000636803	ZNF713	Q8N859	430 aa	Predicted RBP	19.63	■□□□□ 0.73
AMT-238	ENST00000636803	TMX1	Q9H3N1	280 aa		19.63	■□□□□ 0.73
AMT-238	ENST00000636803	SYNRG	Q9UMZ2	1314 aa		19.62	■□□□□ 0.73
AMT-238	ENST00000636803	ESYT2	A0FGR8	921 aa		19.62	■□□□□ 0.73
AMT-238	ENST00000636803	USP17L5	A8MUK1	530 aa		19.62	■□□□□ 0.73
AMT-238	ENST00000636803	APBA3	O96018	575 aa		19.62	■□□□□ 0.73
AMT-238	ENST00000636803	DOK7	Q18PE1	504 aa		19.62	■□□□□ 0.73
AMT-238	ENST00000636803	ASPRV1	Q53RT3	343 aa		19.62	■□□□□ 0.73
AMT-238	ENST00000636803	SOGA3	Q5TF21	947 aa		19.62	■□□□□ 0.73
AMT-238	ENST00000636803	RASGRP2	Q7LDG7	609 aa		19.62	■□□□□ 0.73
AMT-238	ENST00000636803	MTERF4	Q7Z6M4	381 aa	Known RBP	19.62	■□□□□ 0.73
AMT-238	ENST00000636803	CPVL	Q9H3G5	476 aa		19.62	■□□□□ 0.73
AMT-238	ENST00000636803	DDX4	Q9NQI0	724 aa	Known RBP	19.62	■□□□□ 0.73
AMT-238	ENST00000636803	SAMSN1	Q9NSI8	373 aa	Known RBP	19.62	■□□□□ 0.73
AMT-238	ENST00000636803	RMND1	Q9NWS8	449 aa		19.62	■□□□□ 0.73
AMT-238	ENST00000636803	TRMT1	Q9NXH9	659 aa	Known RBP	19.62	■□□□□ 0.73
AMT-238	ENST00000636803	SMCO2	A6NFE2	343 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803		G3V3G9	751 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	PDHB	P11177	359 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	NONO	Q15233	471 aa	Known RBP eCLIP	19.61	■□□□□ 0.73
AMT-238	ENST00000636803	DCAF8	Q5TAQ9	597 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	TEKT1	Q969V4	418 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	MTR	Q99707	1265 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	CCSER1	Q9C0I3	900 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	TMEM60	Q9H2L4	133 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	SERPINB13	Q9UIV8	391 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	EP400	Q96L91	3159 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	CCP110	O43303	1012 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	CTIF	O43310	598 aa	Known RBP	19.61	■□□□□ 0.73
AMT-238	ENST00000636803	AKR1B1	P15121	316 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	STAT6	P42226	847 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	ORC2	Q13416	577 aa	Predicted RBP	19.61	■□□□□ 0.73
AMT-238	ENST00000636803	NR1I3	Q14994	352 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	CDKAL1	Q5VV42	579 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	SPECC1L	Q69YQ0	1117 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	PIGS	Q96S52	555 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803	DISC1	Q9NRI5	854 aa		19.61	■□□□□ 0.73
AMT-238	ENST00000636803		A0A1B0GTH6	734 aa		19.6	■□□□□ 0.73
AMT-238	ENST00000636803	SNHG28	P0DPA3	235 aa		19.6	■□□□□ 0.73
AMT-238	ENST00000636803	HSP90AA4P	Q58FG1	418 aa		19.6	■□□□□ 0.73
AMT-238	ENST00000636803	CDC42EP5	Q6NZY7	148 aa		19.6	■□□□□ 0.73
AMT-238	ENST00000636803	HOMER1	Q86YM7	354 aa		19.6	■□□□□ 0.73
AMT-238	ENST00000636803	STAM	Q92783	540 aa		19.6	■□□□□ 0.73
AMT-238	ENST00000636803	PDCL3	Q9H2J4	239 aa		19.6	■□□□□ 0.73
AMT-238	ENST00000636803	TUBB4A	P04350	444 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	KLHL10	Q6JEL2	608 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	PODN	Q7Z5L7	613 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	PPP1R13B	Q96KQ4	1090 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	MXD3	Q9BW11	206 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	BLZF1	Q9H2G9	400 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	VAT1L	Q9HCJ6	419 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	TTLL1	O95922	423 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	MYL1	P05976	194 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	UBA7	P41226	1012 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	SCNN1D	P51172	638 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	SEMA3F	Q13275	785 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	KARS	Q15046	597 aa	Known RBP	19.59	■□□□□ 0.73
AMT-238	ENST00000636803	ZNF658	Q5TYW1	1059 aa	Predicted RBP	19.59	■□□□□ 0.73
AMT-238	ENST00000636803	RRAGB	Q5VZM2	374 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	APOBEC3H	Q6NTF7	200 aa	Known RBP	19.59	■□□□□ 0.73
AMT-238	ENST00000636803	FCHSD1	Q86WN1	690 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	AK8	Q96MA6	479 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	CTAGE1	Q96RT6	745 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	MRI	Q9BWK5	157 aa		19.59	■□□□□ 0.73
AMT-238	ENST00000636803	RPN1	P04843	607 aa	Known RBP	19.58	■□□□□ 0.72
AMT-238	ENST00000636803	HLA-DOA	P06340	250 aa		19.58	■□□□□ 0.72
AMT-238	ENST00000636803	FKBP1A	P62942	108 aa	Known RBP	19.58	■□□□□ 0.72
AMT-238	ENST00000636803	ZNF772	Q68DY9	489 aa	Predicted RBP	19.58	■□□□□ 0.72

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms