RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ATP5OP48047 213 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 LGR6Q9HBX8 967 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 EBAG9O00559 213 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 GBP1P32455 592 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 SNX1Q13596 522 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 CERKLQ49MI3 558 aaPredicted RBP19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 CCNYQ8ND76 341 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 DENND2CQ68D51 928 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 TEKT1Q969V4 418 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 GPR101Q96P66 508 aaPredicted RBP19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 ZCWPW1Q9H0M4 648 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 PLCB1Q9NQ66 1216 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 MORC4Q8TE76 937 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 SLF1Q9BQI6 1058 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 TMEM191BP0C7N4 346 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 PDE6BP35913 854 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 NSUN2Q08J23 767 aaKnown RBP eCLIP19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 DPH5Q9H2P9 285 aa19.62■□□□□ 0.73
CACNA1A-227ENST00000636549 ZSCAN20P17040 1043 aaPredicted RBP19.61■□□□□ 0.73
CACNA1A-227ENST00000636549 ADCY8P40145 1251 aa19.61■□□□□ 0.73
CACNA1A-227ENST00000636549 IQCB1Q15051 598 aa19.61■□□□□ 0.73
CACNA1A-227ENST00000636549 GNPTABQ3T906 1256 aa19.61■□□□□ 0.73
CACNA1A-227ENST00000636549 FAM180AQ6UWF9 173 aa19.61■□□□□ 0.73
CACNA1A-227ENST00000636549 FGD4Q96M96 766 aa19.61■□□□□ 0.73
CACNA1A-227ENST00000636549 PCIF1Q9H4Z3 704 aa19.61■□□□□ 0.73
CACNA1A-227ENST00000636549 HNRNPCL2B2RXH8 293 aa19.61■□□□□ 0.73
CACNA1A-227ENST00000636549 HNRNPCL1O60812 293 aaKnown RBP19.61■□□□□ 0.73
CACNA1A-227ENST00000636549 PEX26Q7Z412 305 aa19.61■□□□□ 0.73
CACNA1A-227ENST00000636549 PDCD6IPQ8WUM4 868 aaKnown RBP19.61■□□□□ 0.73
CACNA1A-227ENST00000636549 MMTAG2Q9BU76 263 aaKnown RBP19.61■□□□□ 0.73
CACNA1A-227ENST00000636549 PTPN21Q16825 1174 aa19.61■□□□□ 0.73
CACNA1A-227ENST00000636549 XAB2Q9HCS7 855 aaKnown RBP19.61■□□□□ 0.73
CACNA1A-227ENST00000636549 HPS4Q9NQG7 708 aa19.61■□□□□ 0.73
CACNA1A-227ENST00000636549 ELP1O95163 1332 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 PTPN23Q9H3S7 1636 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 DKC1O60832 514 aaKnown RBP eCLIP19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 DEXIO95424 95 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 PCDHB4Q9Y5E5 795 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 ACTN4O43707 911 aaKnown RBP19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 DNAJC10Q8IXB1 793 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 WDR66Q8TBY9 1149 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 MAFGO15525 162 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 PPM1KQ8N3J5 372 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 HOOK2Q96ED9 719 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 ZNF668Q96K58 619 aaPredicted RBP19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 MAST3O60307 1309 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 NONOQ15233 471 aaKnown RBP eCLIP19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 TNNI3KQ59H18 835 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 MAP10Q9P2G4 905 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 FPGT-TNNI3KV9GXZ4 949 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 BCAMP50895 628 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 PPP2R5EQ16537 467 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 SECISBP2LQ93073 1101 aaKnown RBP19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 KCNH3Q9ULD8 1083 aa19.6■□□□□ 0.73
CACNA1A-227ENST00000636549 EVCP57679 992 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 PNMA8AQ86V59 439 aaPredicted RBP19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 FAM149B1Q96BN6 582 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 EDC3Q96F86 508 aaKnown RBP19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 TMEM232C9JQI7 657 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 OSBPP22059 807 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 MAP7Q14244 749 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 SFMBT2Q5VUG0 894 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 A6NJR5 290 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 SOX5P35711 763 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 CACNA2D3Q8IZS8 1091 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 DCAF5Q96JK2 942 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 SLC27A2O14975 620 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 POLR2MP0CAP2 368 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 SLC16A2P36021 539 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 CYP26C1Q6V0L0 522 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 HOXC9P31274 260 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 MAP3K5Q99683 1374 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 TAOK1Q7L7X3 1001 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 PANK4Q9NVE7 773 aa19.59■□□□□ 0.73
CACNA1A-227ENST00000636549 INO80B-WBP1J3KQ70 363 aa19.58■□□□□ 0.73
CACNA1A-227ENST00000636549 INO80BQ9C086 356 aaPredicted RBP19.58■□□□□ 0.73
CACNA1A-227ENST00000636549 BAG5Q9UL15 447 aa19.58■□□□□ 0.73
CACNA1A-227ENST00000636549 M0R2C6 588 aa19.58■□□□□ 0.73
CACNA1A-227ENST00000636549 THAP12O43422 761 aa19.58■□□□□ 0.73
CACNA1A-227ENST00000636549 DMP1Q13316 513 aaPredicted RBP19.58■□□□□ 0.73
CACNA1A-227ENST00000636549 GCNAQ96QF7 691 aa19.58■□□□□ 0.73
CACNA1A-227ENST00000636549 EYA1Q99502 592 aa19.58■□□□□ 0.73
CACNA1A-227ENST00000636549 SGK1O00141 431 aa19.58■□□□□ 0.72
CACNA1A-227ENST00000636549 GNGT2O14610 69 aa19.58■□□□□ 0.72
CACNA1A-227ENST00000636549 COG7P83436 770 aa19.58■□□□□ 0.72
CACNA1A-227ENST00000636549 MTX1Q13505 466 aa19.58■□□□□ 0.72
CACNA1A-227ENST00000636549 METTL23Q86XA0 190 aa19.58■□□□□ 0.72
CACNA1A-227ENST00000636549 SNX25Q9H3E2 840 aa19.58■□□□□ 0.72
CACNA1A-227ENST00000636549 PSTPIP2Q9H939 334 aa19.58■□□□□ 0.72
CACNA1A-227ENST00000636549 OPHN1O60890 802 aa19.58■□□□□ 0.72
CACNA1A-227ENST00000636549 NAPGQ99747 312 aaPredicted RBP19.58■□□□□ 0.72
CACNA1A-227ENST00000636549 SH3TC1Q8TE82 1336 aa19.58■□□□□ 0.72
CACNA1A-227ENST00000636549 HEXIM1O94992 359 aaKnown RBP19.58■□□□□ 0.72
CACNA1A-227ENST00000636549 TBCCQ15814 346 aa19.58■□□□□ 0.72
CACNA1A-227ENST00000636549 CFAP36Q96G28 342 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 CPSF3Q9UKF6 684 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 ADKP55263 362 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 DCAF4L1Q3SXM0 396 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 BMP2KLQ5H9B9 411 aa19.57■□□□□ 0.72
CACNA1A-227ENST00000636549 FAM49AQ9H0Q0 323 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms