RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	KRT40	Q6A162	431 aa		11.08	□□□□□ -0.64
CACNA1A-223	ENST00000636058	OTUD7B	Q6GQQ9	843 aa		11.08	□□□□□ -0.64
CACNA1A-223	ENST00000636058	C2orf69	Q8N8R5	385 aa		11.08	□□□□□ -0.64
CACNA1A-223	ENST00000636058	SHISA4	Q96DD7	197 aa		11.08	□□□□□ -0.64
CACNA1A-223	ENST00000636058	OTUD5	Q96G74	571 aa		11.08	□□□□□ -0.64
CACNA1A-223	ENST00000636058	PIGS	Q96S52	555 aa		11.08	□□□□□ -0.64
CACNA1A-223	ENST00000636058	FEM1B	Q9UK73	627 aa		11.08	□□□□□ -0.64
CACNA1A-223	ENST00000636058	ISY1	Q9ULR0	285 aa	Known RBP	11.08	□□□□□ -0.64
CACNA1A-223	ENST00000636058	KCNH4	Q9UQ05	1017 aa		11.08	□□□□□ -0.64
CACNA1A-223	ENST00000636058	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.08	□□□□□ -0.64
CACNA1A-223	ENST00000636058	PASK	Q96RG2	1323 aa		11.08	□□□□□ -0.64
CACNA1A-223	ENST00000636058	PNMA6F	A0A0J9YX94	578 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	hCG_1984214	I3L0E3	225 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	CXCL11	O14625	94 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	IRF6	O14896	467 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	ZBTB5	O15062	677 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	F13A1	P00488	732 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	XBP1	P17861	261 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	FOSB	P53539	338 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	HMGCS2	P54868	508 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	GUCY1B3	Q02153	619 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	PPIL2	Q13356	520 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	TRIM29	Q14134	588 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	SYDE2	Q5VT97	1194 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	WWC2	Q6AWC2	1192 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	FAM160B2	Q86V87	743 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	HOMER1	Q86YM7	354 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	FAM177A1	Q8N128	213 aa	Predicted RBP	11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	ZNF713	Q8N859	430 aa	Predicted RBP	11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	CHURC1	Q8WUH1	139 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	PIBF1	Q8WXW3	757 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	TNPO1	Q92973	898 aa	Known RBP	11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	OPTN	Q96CV9	577 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	PHF20	Q9BVI0	1012 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	VAT1L	Q9HCJ6	419 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	SH3GLB2	Q9NR46	395 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	TMOD4	Q9NZQ9	345 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	VPS54	Q9P1Q0	977 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	SEC63	Q9UGP8	760 aa	Known RBP	11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058	PRR12	Q9ULL5	1215 aa		11.07	□□□□□ -0.64
CACNA1A-223	ENST00000636058		A0A0G2JLL6	359 aa	Predicted RBP	11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	STXBP3	O00186	592 aa		11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	PPP1R11	O60927	126 aa	Predicted RBP	11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	MMP1	P03956	469 aa		11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	IK	Q13123	557 aa	Predicted RBP	11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	REST	Q13127	1097 aa		11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	CDC37	Q16543	378 aa	Predicted RBP	11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	QRICH1	Q2TAL8	776 aa		11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	TYW1B	Q6NUM6	668 aa		11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	HEATR3	Q7Z4Q2	680 aa		11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	SMC1B	Q8NDV3	1235 aa		11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	SLC10A4	Q96EP9	437 aa		11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	BARHL2	Q9NY43	387 aa		11.06	□□□□□ -0.64
CACNA1A-223	ENST00000636058	RLF	Q13129	1914 aa		11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	GJA5	P36382	358 aa		11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	KIF23	Q02241	960 aa	Predicted RBP	11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	NPY5R	Q15761	445 aa		11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	CLEC17A	Q6ZS10	378 aa		11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	FERMT3	Q86UX7	667 aa		11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	PRPF38A	Q8NAV1	312 aa	Known RBP	11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	KIFC2	Q96AC6	838 aa		11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	SLF1	Q9BQI6	1058 aa		11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	TANGO6	Q9C0B7	1094 aa		11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	RANBP17	Q9H2T7	1088 aa	Known RBP	11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	FBXO28	Q9NVF7	368 aa		11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	KCNJ14	Q9UNX9	436 aa		11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	MYH15	Q9Y2K3	1946 aa		11.05	□□□□□ -0.64
CACNA1A-223	ENST00000636058	ESYT2	A0FGR8	921 aa		11.04	□□□□□ -0.64
CACNA1A-223	ENST00000636058	KIF28P	B7ZC32	967 aa		11.04	□□□□□ -0.64
CACNA1A-223	ENST00000636058	FLOT1	O75955	427 aa		11.04	□□□□□ -0.64
CACNA1A-223	ENST00000636058	TOMM70	O94826	608 aa		11.04	□□□□□ -0.64
CACNA1A-223	ENST00000636058	U2AF2	P26368	475 aa	Known RBP eCLIP	11.04	□□□□□ -0.64
CACNA1A-223	ENST00000636058	MOGS	Q13724	837 aa		11.04	□□□□□ -0.64
CACNA1A-223	ENST00000636058	PPP1R18	Q6NYC8	613 aa		11.04	□□□□□ -0.64
CACNA1A-223	ENST00000636058	CATSPERG	Q6ZRH7	1159 aa		11.04	□□□□□ -0.64
CACNA1A-223	ENST00000636058	DIS3L2	Q8IYB7	885 aa	Known RBP	11.04	□□□□□ -0.64
CACNA1A-223	ENST00000636058	CCDC148	Q8NFR7	591 aa		11.04	□□□□□ -0.64
CACNA1A-223	ENST00000636058	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.04	□□□□□ -0.64
CACNA1A-223	ENST00000636058	WNK4	Q96J92	1243 aa		11.04	□□□□□ -0.64
CACNA1A-223	ENST00000636058	AMN	Q9BXJ7	453 aa		11.04	□□□□□ -0.64
CACNA1A-223	ENST00000636058	PPP1R9A	Q9ULJ8	1098 aa		11.04	□□□□□ -0.64
CACNA1A-223	ENST00000636058	ATP6V1D	Q9Y5K8	247 aa		11.04	□□□□□ -0.64
CACNA1A-223	ENST00000636058	BTBD18	B2RXH4	712 aa		11.03	□□□□□ -0.64
CACNA1A-223	ENST00000636058	USP17L15	C9J2P7	530 aa		11.03	□□□□□ -0.64
CACNA1A-223	ENST00000636058	USP17L13	C9JLJ4	530 aa		11.03	□□□□□ -0.64
CACNA1A-223	ENST00000636058	USP17L11	C9JVI0	530 aa		11.03	□□□□□ -0.64
CACNA1A-223	ENST00000636058	USP17L18	D6R9N7	530 aa		11.03	□□□□□ -0.64
CACNA1A-223	ENST00000636058	USP17L22	D6RA61	530 aa		11.03	□□□□□ -0.64
CACNA1A-223	ENST00000636058	USP17L17	D6RBQ6	530 aa		11.03	□□□□□ -0.64
CACNA1A-223	ENST00000636058	USP17L19	D6RCP7	530 aa		11.03	□□□□□ -0.64
CACNA1A-223	ENST00000636058	USP17L20	D6RJB6	530 aa		11.03	□□□□□ -0.64
CACNA1A-223	ENST00000636058	ZBTB48	P10074	688 aa	Predicted RBP	11.03	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms