RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 MAGEA10P43363 369 aaPredicted RBP8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 PPARAQ07869 468 aa8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 ZNF792Q3KQV3 632 aa8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 FAM47AQ5JRC9 791 aa8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 PRAMEF19Q5SWL8 479 aa8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 ANKRD45Q5TZF3 282 aa8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 CCDC129Q6ZRS4 1044 aa8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 PRPF38AQ8NAV1 312 aaKnown RBP8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 GMCL1P1Q8NEA9 526 aa8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 TEX13BQ9BXU2 312 aa8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 SENP6Q9GZR1 1112 aaPredicted RBP8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 NAPBQ9H115 298 aa8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 SLC38A10Q9HBR0 1119 aa8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 NRBP1Q9UHY1 535 aa8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 DIS3Q9Y2L1 958 aaKnown RBP8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 RIPK3Q9Y572 518 aa8.72□□□□□ -1.01
CACNA1A-222ENST00000636022 PDE1AP54750 535 aa8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 TFAP4Q01664 338 aa8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 PDE4BQ07343 736 aa8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 KCTD2Q14681 263 aa8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 GJC2Q5T442 439 aaPredicted RBP8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 VPS53Q5VIR6 699 aa8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 TICAM2Q86XR7 235 aa8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 ARRDC4Q8NCT1 418 aa8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 EVI5LQ96CN4 794 aa8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 TINF2Q9BSI4 451 aa8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 INCENPQ9NQS7 918 aa8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 FEM1BQ9UK73 627 aa8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 SSUH2Q9Y2M2 353 aa8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 TACC3Q9Y6A5 838 aa8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 CHD9Q3L8U1 2897 aa8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 MCM3APO60318 1980 aa8.71□□□□□ -1.02
CACNA1A-222ENST00000636022 VCANP13611 3396 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 DNAJC25-GNG10A0A024R161 153 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 SLC3A2P08195 630 aaKnown RBP8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 FGRP09769 529 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 ZNF865P0CJ78 1059 aaPredicted RBP8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 TSPY3P0CV98 308 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 TSPY8P0CW00 308 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 TAL1P17542 331 aaPredicted RBP8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 NOVP48745 357 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 ATN1P54259 1190 aaPredicted RBP8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 AAMPQ13685 434 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 SNX17Q15036 470 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 LRRC41Q15345 812 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 ALX1Q15699 326 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 LRIT3Q3SXY7 679 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 ANO1Q5XXA6 986 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 SLFN13Q68D06 897 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 SNRNP48Q6IEG0 339 aaKnown RBP8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 LRRC47Q8N1G4 583 aaKnown RBP8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 LRCH3Q96II8 777 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 IL17RBQ9NRM6 502 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 HELLSQ9NRZ9 838 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 ANAPC4Q9UJX5 808 aa8.7□□□□□ -1.02
CACNA1A-222ENST00000636022 LTBP2Q14767 1821 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 A0A0D9SFI3 127 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 ORC4O43929 436 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 NMT2O60551 498 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 ZBED4O75132 1171 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 BMP3P12645 472 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 OAZ1P54368 228 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 RTP1P59025 263 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 CTDSPL2Q05D32 466 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 C1orf53Q5VUE5 145 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 MAMDC4Q6UXC1 1216 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 SLC39A5Q6ZMH5 540 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 SMC5Q8IY18 1101 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 TDHQ8IZJ6 230 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 CPXCR1Q8N123 301 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 MSL3Q8N5Y2 521 aaKnown RBP8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 KIFC2Q96AC6 838 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 GMCL1Q96IK5 515 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 FAM227BQ96M60 508 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 FGD4Q96M96 766 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 UBE2OQ9C0C9 1292 aaKnown RBP8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 RAVER2Q9HCJ3 691 aaKnown RBP8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 SYNGAP1Q96PV0 1343 aa8.69□□□□□ -1.02
CACNA1A-222ENST00000636022 TMEM232C9JQI7 657 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 KBTBD13C9JR72 458 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 PLA2G6O60733 806 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 SNAI1O95863 264 aaPredicted RBP8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 IGHDP01880 384 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 FGAP02671 866 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 RARBP10826 455 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 MCCP23508 829 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 ADCYAP1R1P41586 468 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 STAT2P52630 851 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 MDM2Q00987 491 aaPredicted RBP8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 MCMDC2Q4G0Z9 681 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 GPR153Q6NV75 609 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 ZNF467Q7Z7K2 595 aaPredicted RBP8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 CHST13Q8NET6 341 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 STAG1Q8WVM7 1258 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 DDX11Q96FC9 970 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 LNPKQ9C0E8 428 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 XPNPEP3Q9NQH7 507 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 ZBTB47Q9UFB7 747 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms