RNA–Protein interactions for RNA: ENST00000635893.1

SCN1A-211, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 168 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-211ENST00000635893 CLEC3AO75596 197 aa5.95□□□□□ -1.46
SCN1A-211ENST00000635893 PRAMEF1O95521 474 aa5.95□□□□□ -1.46
SCN1A-211ENST00000635893 ERCC3P19447 782 aa5.95□□□□□ -1.46
SCN1A-211ENST00000635893 ENDOUP21128 410 aaKnown RBP5.95□□□□□ -1.46
SCN1A-211ENST00000635893 POLR2BP30876 1174 aaKnown RBP5.95□□□□□ -1.46
SCN1A-211ENST00000635893 VIPR1P32241 457 aa5.95□□□□□ -1.46
SCN1A-211ENST00000635893 RTP1P59025 263 aa5.95□□□□□ -1.46
SCN1A-211ENST00000635893 ERVFRD-1P60508 538 aa5.95□□□□□ -1.46
SCN1A-211ENST00000635893 OVOS1Q6IE37 1185 aa5.95□□□□□ -1.46
SCN1A-211ENST00000635893 ZPBP2Q6X784 338 aa5.95□□□□□ -1.46
SCN1A-211ENST00000635893 KRTAP9-3Q9BYQ3 159 aa5.95□□□□□ -1.46
SCN1A-211ENST00000635893 CNTD2Q9H8S5 307 aa5.95□□□□□ -1.46
SCN1A-211ENST00000635893 TRIM13O60858 407 aa5.94□□□□□ -1.46
SCN1A-211ENST00000635893 GALNT18Q6P9A2 607 aa5.94□□□□□ -1.46
SCN1A-211ENST00000635893 PANK1Q8TE04 598 aa5.94□□□□□ -1.46
SCN1A-211ENST00000635893 ZNF296Q8WUU4 475 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-211ENST00000635893 DACT3Q96B18 629 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-211ENST00000635893 ATG4CQ96DT6 458 aa5.94□□□□□ -1.46
SCN1A-211ENST00000635893 FCRL2Q96LA5 508 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-211ENST00000635893 PLCD4Q9BRC7 762 aa5.94□□□□□ -1.46
SCN1A-211ENST00000635893 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
SCN1A-211ENST00000635893 PRDM14Q9GZV8 571 aa5.94□□□□□ -1.46
SCN1A-211ENST00000635893 ADAMTS20P59510 1910 aa5.93□□□□□ -1.46
SCN1A-211ENST00000635893 WTIPA6NIX2 430 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-211ENST00000635893 FADS2P1A8MWK0 482 aa5.93□□□□□ -1.46
SCN1A-211ENST00000635893 FOXD2O60548 495 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-211ENST00000635893 MPOP05164 745 aa5.93□□□□□ -1.46
SCN1A-211ENST00000635893 SDHBP21912 280 aa5.93□□□□□ -1.46
SCN1A-211ENST00000635893 AFF3P51826 1226 aaKnown RBP5.93□□□□□ -1.46
SCN1A-211ENST00000635893 EPHB3P54753 998 aa5.93□□□□□ -1.46
SCN1A-211ENST00000635893 NLRC3Q7RTR2 1065 aa5.93□□□□□ -1.46
SCN1A-211ENST00000635893 REXO1Q8N1G1 1221 aaKnown RBP5.93□□□□□ -1.46
SCN1A-211ENST00000635893 CHST7Q9NS84 486 aa5.93□□□□□ -1.46
SCN1A-211ENST00000635893 TAF6LQ9Y6J9 622 aa5.93□□□□□ -1.46
SCN1A-211ENST00000635893 SASH1O94885 1247 aa5.92□□□□□ -1.46
SCN1A-211ENST00000635893 ARL4AP40617 200 aa5.92□□□□□ -1.46
SCN1A-211ENST00000635893 CRKP46108 304 aa5.92□□□□□ -1.46
SCN1A-211ENST00000635893 TMEM62Q0P6H9 643 aa5.92□□□□□ -1.46
SCN1A-211ENST00000635893 LAPTM5Q13571 262 aa5.92□□□□□ -1.46
SCN1A-211ENST00000635893 NFIXQ14938 502 aa5.92□□□□□ -1.46
SCN1A-211ENST00000635893 LRRFIP1Q32MZ4 808 aaKnown RBP5.92□□□□□ -1.46
SCN1A-211ENST00000635893 HSF5Q4G112 596 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-211ENST00000635893 MZB1Q8WU39 189 aa5.92□□□□□ -1.46
SCN1A-211ENST00000635893 ZNF512BQ96KM6 892 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-211ENST00000635893 EPB41L4AQ9HCS5 686 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-211ENST00000635893 RTEL1Q9NZ71 1219 aa5.92□□□□□ -1.46
SCN1A-211ENST00000635893 GPR55Q9Y2T6 319 aaPredicted RBP5.92□□□□□ -1.46
SCN1A-211ENST00000635893 IRS4O14654 1257 aaPredicted RBP5.91□□□□□ -1.46
SCN1A-211ENST00000635893 SYN1P17600 705 aa5.91□□□□□ -1.46
SCN1A-211ENST00000635893 BMP8BP34820 402 aa5.91□□□□□ -1.46
SCN1A-211ENST00000635893 CDR1P51861 262 aa5.91□□□□□ -1.46
SCN1A-211ENST00000635893 SEZ6Q53EL9 994 aa5.91□□□□□ -1.46
SCN1A-211ENST00000635893 GK5Q6ZS86 529 aa5.91□□□□□ -1.46
SCN1A-211ENST00000635893 MKRN2Q9H000 416 aaKnown RBP5.91□□□□□ -1.46
SCN1A-211ENST00000635893 XYLT2Q9H1B5 865 aa5.91□□□□□ -1.46
SCN1A-211ENST00000635893 MINPP1Q9UNW1 487 aa5.91□□□□□ -1.46
SCN1A-211ENST00000635893 PCDHB12Q9Y5F1 795 aa5.91□□□□□ -1.46
SCN1A-211ENST00000635893 A0A1W2PQ45 241 aaPredicted RBP5.9□□□□□ -1.46
SCN1A-211ENST00000635893 A0A1W2PQY0 241 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 ZNF205O95201 554 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 PDIA4P13667 645 aaKnown RBP5.9□□□□□ -1.46
SCN1A-211ENST00000635893 NME1P15531 152 aaKnown RBP5.9□□□□□ -1.46
SCN1A-211ENST00000635893 ZNF165P49910 485 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 CLCQ05315 142 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 KIR3DS1Q14943 382 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 CNKSR3Q6P9H4 555 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 SLCO6A1Q86UG4 719 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 TMEM192Q8IY95 271 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 CDADC1Q9BWV3 514 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 ERVK13-1Q9NX77 482 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 GFOD1Q9NXC2 390 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 PRR13Q9NZ81 148 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 UBP1Q9NZI7 540 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 KLHL14Q9P2G3 628 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 ADAMTS1Q9UHI8 967 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 GGT7Q9UJ14 662 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 FBXL21Q9UKT6 434 aa5.9□□□□□ -1.46
SCN1A-211ENST00000635893 MEIS3P2A8K0S8 358 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 MEIS1O00470 390 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 TNFRSF10CO14798 259 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 VAV1P15498 845 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 PRKCAP17252 672 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 MCM4P33991 863 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 CTSKP43235 329 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 CYP4F8P98187 520 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 APOBRQ0VD83 1088 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 HS2ST1Q7LGA3 356 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 LDHDQ86WU2 507 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 FAM129CQ86XR2 697 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 TMEFF1Q8IYR6 380 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 CXorf38Q8TB03 319 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 SLC6A18Q96N87 628 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 ANTXR1Q9H6X2 564 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 ACSL6Q9UKU0 697 aa5.89□□□□□ -1.47
SCN1A-211ENST00000635893 OTOL1A6NHN0 477 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-211ENST00000635893 AUHQ13825 339 aaKnown RBP5.88□□□□□ -1.47
SCN1A-211ENST00000635893 CBX2Q14781 532 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-211ENST00000635893 RAB3GAP1Q15042 981 aa5.88□□□□□ -1.47
SCN1A-211ENST00000635893 CCDC27Q2M243 656 aa5.88□□□□□ -1.47
SCN1A-211ENST00000635893 TMC6Q7Z403 805 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms