RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 PARD6BQ9BYG5 372 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 WDR7Q9Y4E6 1490 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 BTBD18B2RXH4 712 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 GUCY2CP25092 1073 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 U2AF1L4Q8WU68 220 aaKnown RBP12.84□□□□□ -0.35
COL11A1-211ENST00000635193 AATFQ9NY61 560 aaKnown RBP eCLIP12.84□□□□□ -0.35
COL11A1-211ENST00000635193 PKD2L1Q9P0L9 805 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 TACC3Q9Y6A5 838 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 SH3TC1Q8TE82 1336 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 ABCC10Q5T3U5 1492 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 HIBADHP31937 336 aaKnown RBP12.84□□□□□ -0.35
COL11A1-211ENST00000635193 COPB1P53618 953 aaKnown RBP12.84□□□□□ -0.35
COL11A1-211ENST00000635193 SMTNP53814 917 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 POLE2P56282 527 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 HINFPQ9BQA5 517 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 TAF5LO75529 589 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 ITIH3Q06033 890 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 PPARAQ07869 468 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 SLC39A14Q15043 492 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 TTC36A6NLP5 189 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 ENC1O14682 589 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 PPFIA2O75334 1257 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 GCNT3O95395 438 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 EIF6P56537 245 aaKnown RBP12.84□□□□□ -0.35
COL11A1-211ENST00000635193 TAF11Q15544 211 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 MAIP1Q8WWC4 291 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 KDM5CP41229 1560 aa12.84□□□□□ -0.35
COL11A1-211ENST00000635193 CCDC169A6NNP5 214 aa12.83□□□□□ -0.35
COL11A1-211ENST00000635193 EXOC3O60645 756 aa12.83□□□□□ -0.35
COL11A1-211ENST00000635193 TBC1D8O95759 1140 aa12.83□□□□□ -0.35
COL11A1-211ENST00000635193 TTLL12Q14166 644 aaPredicted RBP12.83□□□□□ -0.35
COL11A1-211ENST00000635193 PPP2R5EQ16537 467 aa12.83□□□□□ -0.35
COL11A1-211ENST00000635193 LGSNQ5TDP6 509 aa12.83□□□□□ -0.35
COL11A1-211ENST00000635193 MRPL44Q9H9J2 332 aaKnown RBP12.83□□□□□ -0.35
COL11A1-211ENST00000635193 THEGQ9P2T0 379 aa12.83□□□□□ -0.35
COL11A1-211ENST00000635193 SCOCQ9UIL1 159 aa12.83□□□□□ -0.35
COL11A1-211ENST00000635193 ZBTB12Q9Y330 459 aaPredicted RBP12.83□□□□□ -0.35
COL11A1-211ENST00000635193 ARHGEF35A5YM69 484 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 PPP6R2O75170 966 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 RPN1P04843 607 aaKnown RBP12.83□□□□□ -0.36
COL11A1-211ENST00000635193 STMN1P16949 149 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 GUCY2DQ02846 1103 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 ZC3H12CQ9C0D7 883 aaKnown RBP12.83□□□□□ -0.36
COL11A1-211ENST00000635193 DPH5Q9H2P9 285 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 POLR3EQ9NVU0 708 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 USTQ9Y2C2 406 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 A0A087WWV3 80 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 EPHB4P54760 987 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 ARMC9Q7Z3E5 817 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 MYCT1Q8N699 235 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 FANCBQ8NB91 859 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 RBL2Q08999 1139 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 P3H4Q92791 437 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 ABTB1Q969K4 478 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-211ENST00000635193 VPS37BQ9H9H4 285 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 SLC24A3Q9HC58 644 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 EXOC7Q9UPT5 735 aa12.83□□□□□ -0.36
COL11A1-211ENST00000635193 EIF3CLB5ME19 914 aaKnown RBP12.82□□□□□ -0.36
COL11A1-211ENST00000635193 BACH1O14867 736 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 EVI5O60447 810 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 STAT1P42224 750 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 ARHGAP44Q17R89 818 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 CCDC13Q8IYE1 715 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 MYOCDQ8IZQ8 938 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 NSUN7Q8NE18 718 aaKnown RBP12.82□□□□□ -0.36
COL11A1-211ENST00000635193 MORC4Q8TE76 937 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 SYMPKQ92797 1274 aaKnown RBP12.82□□□□□ -0.36
COL11A1-211ENST00000635193 EIF3CQ99613 913 aaKnown RBP12.82□□□□□ -0.36
COL11A1-211ENST00000635193 CARMIL3Q8ND23 1372 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 CHUKO15111 745 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 FGAP02671 866 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 A1BGP04217 495 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 REXO1Q8N1G1 1221 aaKnown RBP12.82□□□□□ -0.36
COL11A1-211ENST00000635193 TSC22D3Q99576 134 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 TRIM6Q9C030 488 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-211ENST00000635193 MROH5Q6ZUA9 1318 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 PTPN21Q16825 1174 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 NT5C3AQ9H0P0 336 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 INTS9Q9NV88 658 aaKnown RBP12.82□□□□□ -0.36
COL11A1-211ENST00000635193 RCOR1Q9UKL0 485 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 KIF1CO43896 1103 aaKnown RBP12.82□□□□□ -0.36
COL11A1-211ENST00000635193 ABCB4P21439 1286 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 SP4Q02446 784 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 PARP10Q53GL7 1025 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 BLIDQ8IZY5 108 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 KLHL29Q96CT2 875 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 SAAL1Q96ER3 474 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 XRCC5P13010 732 aaKnown RBP12.82□□□□□ -0.36
COL11A1-211ENST00000635193 GEN1Q17RS7 908 aa12.82□□□□□ -0.36
COL11A1-211ENST00000635193 PBRM1Q86U86 1689 aa12.81□□□□□ -0.36
COL11A1-211ENST00000635193 HARSP12081 509 aaKnown RBP12.81□□□□□ -0.36
COL11A1-211ENST00000635193 CASP8Q14790 479 aa12.81□□□□□ -0.36
COL11A1-211ENST00000635193 PTPROQ16827 1216 aa12.81□□□□□ -0.36
COL11A1-211ENST00000635193 FAM47AQ5JRC9 791 aa12.81□□□□□ -0.36
COL11A1-211ENST00000635193 HIBCHQ6NVY1 386 aaPredicted RBP12.81□□□□□ -0.36
COL11A1-211ENST00000635193 IFNL3Q8IZI9 196 aa12.81□□□□□ -0.36
COL11A1-211ENST00000635193 OGFOD1Q8N543 542 aa12.81□□□□□ -0.36
COL11A1-211ENST00000635193 KIFC2Q96AC6 838 aa12.81□□□□□ -0.36
COL11A1-211ENST00000635193 GSDMAQ96QA5 445 aa12.81□□□□□ -0.36
COL11A1-211ENST00000635193 ADAM21Q9UKJ8 722 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms