RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 SNRNP48Q6IEG0 339 aaKnown RBP15.48■□□□□ 0.07
LINC00339-206ENST00000634451 RPAP2Q8IXW5 612 aaPredicted RBP15.48■□□□□ 0.07
LINC00339-206ENST00000634451 KANSL2Q9H9L4 492 aa15.48■□□□□ 0.07
LINC00339-206ENST00000634451 EPB41L4AQ9HCS5 686 aaPredicted RBP15.48■□□□□ 0.07
LINC00339-206ENST00000634451 PRDM6Q9NQX0 595 aa15.48■□□□□ 0.07
LINC00339-206ENST00000634451 ZHX1Q9UKY1 873 aaPredicted RBP15.48■□□□□ 0.07
LINC00339-206ENST00000634451 MYH4Q9Y623 1939 aa15.48■□□□□ 0.07
LINC00339-206ENST00000634451 GRXCR1A8MXD5 290 aa15.47■□□□□ 0.07
LINC00339-206ENST00000634451 PRDM1O75626 825 aa15.47■□□□□ 0.07
LINC00339-206ENST00000634451 FOSL2P15408 326 aa15.47■□□□□ 0.07
LINC00339-206ENST00000634451 ACLYP53396 1101 aa15.47■□□□□ 0.07
LINC00339-206ENST00000634451 GRIN2CQ14957 1233 aa15.47■□□□□ 0.07
LINC00339-206ENST00000634451 CCSAPQ6IQ19 270 aaPredicted RBP15.47■□□□□ 0.07
LINC00339-206ENST00000634451 CPXCR1Q8N123 301 aa15.47■□□□□ 0.07
LINC00339-206ENST00000634451 STRBPQ96SI9 672 aaKnown RBP15.47■□□□□ 0.07
LINC00339-206ENST00000634451 SLF1Q9BQI6 1058 aa15.47■□□□□ 0.07
LINC00339-206ENST00000634451 RAVER2Q9HCJ3 691 aaKnown RBP15.47■□□□□ 0.07
LINC00339-206ENST00000634451 GOPCQ9HD26 462 aa15.47■□□□□ 0.07
LINC00339-206ENST00000634451 DNAJC25-GNG10A0A024R161 153 aa15.46■□□□□ 0.07
LINC00339-206ENST00000634451 GSG1L2A8MUP6 293 aa15.46■□□□□ 0.07
LINC00339-206ENST00000634451 RAB11FIP3O75154 756 aa15.46■□□□□ 0.07
LINC00339-206ENST00000634451 AKR1A1P14550 325 aa15.46■□□□□ 0.07
LINC00339-206ENST00000634451 RAG1P15918 1043 aa15.46■□□□□ 0.07
LINC00339-206ENST00000634451 KCNA10Q16322 511 aa15.46■□□□□ 0.07
LINC00339-206ENST00000634451 C16orf59Q7L2K0 433 aa15.46■□□□□ 0.07
LINC00339-206ENST00000634451 RNF180Q86T96 592 aa15.46■□□□□ 0.07
LINC00339-206ENST00000634451 KLHDC9Q8NEP7 349 aa15.46■□□□□ 0.07
LINC00339-206ENST00000634451 OSBP2Q969R2 916 aa15.46■□□□□ 0.07
LINC00339-206ENST00000634451 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.46■□□□□ 0.07
LINC00339-206ENST00000634451 TMEM39AQ9NV64 488 aa15.46■□□□□ 0.07
LINC00339-206ENST00000634451 NRBP1Q9UHY1 535 aa15.46■□□□□ 0.07
LINC00339-206ENST00000634451 TACC3Q9Y6A5 838 aa15.46■□□□□ 0.07
LINC00339-206ENST00000634451 MINDY4BA8MYZ0 360 aa15.45■□□□□ 0.06
LINC00339-206ENST00000634451 F5H6K3 240 aa15.45■□□□□ 0.06
LINC00339-206ENST00000634451 HMMRO75330 724 aa15.45■□□□□ 0.06
LINC00339-206ENST00000634451 PBX2P40425 430 aa15.45■□□□□ 0.06
LINC00339-206ENST00000634451 FPGSQ05932 587 aa15.45■□□□□ 0.06
LINC00339-206ENST00000634451 KLRC3Q07444 240 aa15.45■□□□□ 0.06
LINC00339-206ENST00000634451 RASGRP2Q7LDG7 609 aa15.45■□□□□ 0.06
LINC00339-206ENST00000634451 LRRC47Q8N1G4 583 aaKnown RBP15.45■□□□□ 0.06
LINC00339-206ENST00000634451 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC00339-206ENST00000634451 TEX13BQ9BXU2 312 aa15.45■□□□□ 0.06
LINC00339-206ENST00000634451 STARD7Q9NQZ5 370 aa15.45■□□□□ 0.06
LINC00339-206ENST00000634451 CNPY2Q9Y2B0 182 aa15.45■□□□□ 0.06
LINC00339-206ENST00000634451 DIS3Q9Y2L1 958 aaKnown RBP15.45■□□□□ 0.06
LINC00339-206ENST00000634451 IGKV6D-41A0A0C4DH26 115 aa15.44■□□□□ 0.06
LINC00339-206ENST00000634451 RBAK-RBAKDNI3L0D1 243 aa15.44■□□□□ 0.06
LINC00339-206ENST00000634451 M0R2C6 588 aa15.44■□□□□ 0.06
LINC00339-206ENST00000634451 DNAJB2P25686 324 aa15.44■□□□□ 0.06
LINC00339-206ENST00000634451 KIFC2Q96AC6 838 aa15.44■□□□□ 0.06
LINC00339-206ENST00000634451 TBX21Q9UL17 535 aa15.44■□□□□ 0.06
LINC00339-206ENST00000634451 DDX19BQ9UMR2 479 aa15.44■□□□□ 0.06
LINC00339-206ENST00000634451 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.43■□□□□ 0.06
LINC00339-206ENST00000634451 CTAGE5O15320 804 aa15.43■□□□□ 0.06
LINC00339-206ENST00000634451 ACRP10323 421 aa15.43■□□□□ 0.06
LINC00339-206ENST00000634451 CNTN2Q02246 1040 aa15.43■□□□□ 0.06
LINC00339-206ENST00000634451 ANKRD33Q7Z3H0 272 aa15.43■□□□□ 0.06
LINC00339-206ENST00000634451 AMOTL1Q8IY63 956 aa15.43■□□□□ 0.06
LINC00339-206ENST00000634451 DDX11Q96FC9 970 aa15.43■□□□□ 0.06
LINC00339-206ENST00000634451 PPP1R12CQ9BZL4 782 aa15.43■□□□□ 0.06
LINC00339-206ENST00000634451 HOMER2Q9NSB8 354 aa15.43■□□□□ 0.06
LINC00339-206ENST00000634451 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.43■□□□□ 0.06
LINC00339-206ENST00000634451 ARPP21Q9UBL0 812 aaPredicted RBP15.43■□□□□ 0.06
LINC00339-206ENST00000634451 CLIP2Q9UDT6 1046 aa15.43■□□□□ 0.06
LINC00339-206ENST00000634451 C6orf222P0C671 652 aaPredicted RBP15.42■□□□□ 0.06
LINC00339-206ENST00000634451 SNAP25P60880 206 aa15.42■□□□□ 0.06
LINC00339-206ENST00000634451 BEX3Q00994 111 aa15.42■□□□□ 0.06
LINC00339-206ENST00000634451 SBK1Q52WX2 424 aa15.42■□□□□ 0.06
LINC00339-206ENST00000634451 TMEM63BQ5T3F8 832 aa15.42■□□□□ 0.06
LINC00339-206ENST00000634451 MAMDC4Q6UXC1 1216 aa15.42■□□□□ 0.06
LINC00339-206ENST00000634451 CEP95Q96GE4 821 aa15.42■□□□□ 0.06
LINC00339-206ENST00000634451 SEC62Q99442 399 aaKnown RBP15.42■□□□□ 0.06
LINC00339-206ENST00000634451 KATNBL1Q9H079 304 aa15.42■□□□□ 0.06
LINC00339-206ENST00000634451 NYAP2Q9P242 653 aa15.42■□□□□ 0.06
LINC00339-206ENST00000634451 FAM184BQ9ULE4 1060 aa15.42■□□□□ 0.06
LINC00339-206ENST00000634451 LRRC37A2A6NM11 1700 aa15.42■□□□□ 0.06
LINC00339-206ENST00000634451 GBF1Q92538 1859 aa15.42■□□□□ 0.06
LINC00339-206ENST00000634451 ASTN1O14525 1302 aa15.42■□□□□ 0.06
LINC00339-206ENST00000634451 UMODL1Q5DID0 1318 aa15.42■□□□□ 0.06
LINC00339-206ENST00000634451 SYNGAP1Q96PV0 1343 aa15.42■□□□□ 0.06
LINC00339-206ENST00000634451 LCTP09848 1927 aa15.41■□□□□ 0.06
LINC00339-206ENST00000634451 MUC3AQ02505 3323 aa15.41■□□□□ 0.06
LINC00339-206ENST00000634451 TIMP1P01033 207 aa15.41■□□□□ 0.06
LINC00339-206ENST00000634451 ASGR1P07306 291 aa15.41■□□□□ 0.06
LINC00339-206ENST00000634451 CSF2RAP15509 400 aa15.41■□□□□ 0.06
LINC00339-206ENST00000634451 ACVR2BQ13705 512 aa15.41■□□□□ 0.06
LINC00339-206ENST00000634451 CCDC144BQ3MJ40 725 aa15.41■□□□□ 0.06
LINC00339-206ENST00000634451 ARMCX2Q7L311 632 aa15.41■□□□□ 0.06
LINC00339-206ENST00000634451 DDRGK1Q96HY6 314 aa15.41■□□□□ 0.06
LINC00339-206ENST00000634451 TSEN34Q9BSV6 310 aaKnown RBP15.41■□□□□ 0.06
LINC00339-206ENST00000634451 LRRCC1Q9C099 1032 aa15.41■□□□□ 0.06
LINC00339-206ENST00000634451 MKNK2Q9HBH9 465 aa15.41■□□□□ 0.06
LINC00339-206ENST00000634451 SLC38A10Q9HBR0 1119 aa15.41■□□□□ 0.06
LINC00339-206ENST00000634451 CHD9Q3L8U1 2897 aa15.4■□□□□ 0.06
LINC00339-206ENST00000634451 DCDC2CA8MYV0 355 aa15.4■□□□□ 0.06
LINC00339-206ENST00000634451 GPAA1O43292 621 aa15.4■□□□□ 0.06
LINC00339-206ENST00000634451 DUSP11O75319 330 aaKnown RBP15.4■□□□□ 0.06
LINC00339-206ENST00000634451 CDK7P50613 346 aa15.4■□□□□ 0.06
LINC00339-206ENST00000634451 TMEM240Q5SV17 173 aa15.4■□□□□ 0.06
LINC00339-206ENST00000634451 CCDC144CPQ8IYA2 1237 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms