RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 ALYREFQ86V81 257 aaKnown RBP6.93□□□□□ -1.3
TRAPPC9-216ENST00000634178 ZNF227Q86WZ6 799 aa6.93□□□□□ -1.3
TRAPPC9-216ENST00000634178 PPP1R13LQ8WUF5 828 aa6.93□□□□□ -1.3
TRAPPC9-216ENST00000634178 FGD4Q96M96 766 aa6.93□□□□□ -1.3
TRAPPC9-216ENST00000634178 FBXL18Q96ME1 805 aa6.93□□□□□ -1.3
TRAPPC9-216ENST00000634178 MIPEPQ99797 713 aa6.93□□□□□ -1.3
TRAPPC9-216ENST00000634178 ACSS3Q9H6R3 686 aa6.93□□□□□ -1.3
TRAPPC9-216ENST00000634178 CAAP1Q9H8G2 361 aa6.93□□□□□ -1.3
TRAPPC9-216ENST00000634178 INTS7Q9NVH2 962 aaKnown RBP6.93□□□□□ -1.3
TRAPPC9-216ENST00000634178 FBXL21Q9UKT6 434 aa6.93□□□□□ -1.3
TRAPPC9-216ENST00000634178 DIS3Q9Y2L1 958 aaKnown RBP6.93□□□□□ -1.3
TRAPPC9-216ENST00000634178 PCDHB12Q9Y5F1 795 aa6.93□□□□□ -1.3
TRAPPC9-216ENST00000634178 ADCY10Q96PN6 1610 aa6.93□□□□□ -1.3
TRAPPC9-216ENST00000634178 PRG4Q92954 1404 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC9-216ENST00000634178 C9orf172C9J069 976 aa6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 CBFA2T2O43439 604 aa6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 PABPC1P11940 636 aaKnown RBP6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 RAB6AP20340 208 aa6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 FAM209AQ5JX71 171 aa6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 DCAF15Q66K64 600 aa6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 UBE3DQ7Z6J8 389 aa6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 KRTAP1-3Q8IUG1 177 aa6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 DHX37Q8IY37 1157 aaKnown RBP6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 DNAJB8Q8NHS0 232 aa6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 LENG1Q96BZ8 264 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 ZNF512BQ96KM6 892 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 EXOC2Q96KP1 924 aa6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 GP6Q9HCN6 339 aa6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 DDX56Q9NY93 547 aaKnown RBP6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 USP21Q9UK80 565 aa6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 AKT3Q9Y243 479 aa6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 DAGLAQ9Y4D2 1042 aa6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 ZNF451Q9Y4E5 1061 aa6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 TSPOAP1O95153 1857 aa6.92□□□□□ -1.3
TRAPPC9-216ENST00000634178 PRODHO43272 600 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 MARCH6O60337 910 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 EFCAB14O75071 495 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 APBA3O96018 575 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 SPATA31C1P0DKV0 1188 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 GLB1P16278 677 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 CPEP16870 476 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 STAT3P40763 770 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 AHI1Q8N157 1196 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 CEP89Q96ST8 783 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 MAGEC2Q9UBF1 373 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 APEX2Q9UBZ4 518 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 MCM8Q9UJA3 840 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 MAPRE3Q9UPY8 281 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 SF3B6Q9Y3B4 125 aaKnown RBP6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 EMC9Q9Y3B6 208 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 FHOD1Q9Y613 1164 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 ERICH3Q5RHP9 1530 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 GLI2P10070 1586 aa6.91□□□□□ -1.3
TRAPPC9-216ENST00000634178 FAM229AH3BQW9 127 aa6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 PREPP48147 710 aa6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 GRB10Q13322 594 aa6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 C21orf62-AS1Q17RA5 79 aa6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 NBPF9Q3BBW0 867 aa6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 FOXB2Q5VYV0 432 aa6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 Q6ZS46 218 aa6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 CDH24Q86UP0 819 aa6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 TRIM59Q8IWR1 403 aa6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 RPUSD2Q8IZ73 545 aaKnown RBP6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 AGGF1Q8N302 714 aaeCLIP6.9□□□□□ -1.33e-9■■■■■ 54.6
TRAPPC9-216ENST00000634178 ARHGEF39Q8N4T4 335 aa6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 ZNF513Q8N8E2 541 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 KCTD13Q8WZ19 329 aa6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 VWCEQ96DN2 955 aa6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 PRDM10Q9NQV6 1147 aa6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 KCNH3Q9ULD8 1083 aa6.9□□□□□ -1.3
TRAPPC9-216ENST00000634178 TOP2BQ02880 1626 aa6.9□□□□□ -1.31
TRAPPC9-216ENST00000634178 IRS4O14654 1257 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 PDE8AO60658 829 aa6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 RAPGEF3O95398 923 aa6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 CPP00450 1065 aa6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 HOXC12P31275 282 aa6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 GABREP78334 506 aa6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 WWC2Q6AWC2 1192 aa6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 THNSL2Q86YJ6 484 aa6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 SYTL5Q8TDW5 730 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 EZH1Q92800 747 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 MRGPRX3Q96LB0 322 aa6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 ASCC2Q9H1I8 757 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 SEMA6CQ9H3T2 930 aa6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 HOMER2Q9NSB8 354 aa6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 SFMBT1Q9UHJ3 866 aa6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 LMTK3Q96Q04 1460 aa6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 PPRC1Q5VV67 1664 aaKnown RBP6.89□□□□□ -1.31
TRAPPC9-216ENST00000634178 C1QTNF9BB2RNN3 333 aa6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 ALG1L2C9J202 215 aa6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 KCNQ2O43526 872 aa6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 S100BP04271 92 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 NFICP08651 508 aa6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 RXRBP28702 533 aa6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 CHRNA4P43681 627 aa6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 CBX2Q14781 532 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 PLEKHG6Q3KR16 790 aa6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 TRIM61Q5EBN2 209 aa6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 CD163Q86VB7 1156 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms