RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 SPPL2CQ8IUH8 684 aa5.04□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 SLITRK4Q8IW52 837 aa5.04□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 PHACTR4Q8IZ21 702 aa5.04□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 ZNF296Q8WUU4 475 aaPredicted RBP5.04□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 SHISA4Q96DD7 197 aa5.04□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 SPATA32Q96LK8 384 aa5.04□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 ASCC2Q9H1I8 757 aaPredicted RBP5.04□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 SIRT5Q9NXA8 310 aa5.04□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 KLHL3Q9UH77 587 aa5.04□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 DUSP13Q9UII6 198 aa5.04□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 MINDY4BA8MYZ0 360 aa5.03□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 PRICKLE3O43900 615 aaPredicted RBP5.03□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 RAG1P15918 1043 aa5.03□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 TNFRSF1AP19438 455 aa5.03□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 GBP1P32455 592 aa5.03□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 ZNF76P36508 570 aa5.03□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 FAM160A1Q05DH4 1040 aa5.03□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 COL9A2Q14055 689 aaPredicted RBP5.03□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 HOMEZQ8IX15 550 aa5.03□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 SYTL5Q8TDW5 730 aaPredicted RBP5.03□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 CNNM2Q9H8M5 875 aa5.03□□□□□ -1.6
NPHP3-ACAD11-202ENST00000632629 CHURC1-FNTBB4DL54 471 aa5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 TNFRSF10CO14798 259 aa5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 GRIN3BO60391 1043 aa5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 APOBRQ0VD83 1088 aa5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 ADGRF1Q5T601 910 aa5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 CNKSR3Q6P9H4 555 aa5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 RNF111Q6ZNA4 994 aa5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 KIAA0825Q8IV33 1275 aa5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 TAB3Q8N5C8 712 aaPredicted RBP5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 LINC01356Q8N9X3 169 aa5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 TMEM87AQ8NBN3 555 aa5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 SLC16A11Q8NCK7 471 aa5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 VWCEQ96DN2 955 aa5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 BRMS1Q9HCU9 246 aa5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 PALD1Q9ULE6 856 aa5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 PCDHB14Q9Y5E9 798 aa5.02□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 UPK3BL1B0FP48 263 aa5.01□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 UPK3BL2E5RIL1 263 aa5.01□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 LTKP29376 864 aa5.01□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 MFAP1P55081 439 aaKnown RBP5.01□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 CLEC16AQ2KHT3 1053 aa5.01□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 INTS3Q68E01 1043 aaKnown RBP5.01□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 NLRC3Q7RTR2 1065 aa5.01□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 TMEFF1Q8IYR6 380 aa5.01□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 ANKS4BQ8N8V4 417 aa5.01□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 DAGLBQ8NCG7 672 aa5.01□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 NKD1Q969G9 470 aa5.01□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 CNTD2Q9H8S5 307 aa5.01□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 SRRDQ9UH36 339 aa5.01□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 EBF1Q9UH73 591 aa5.01□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 ADAMTS1Q9UHI8 967 aa5.01□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 HRKO00198 91 aa5□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 IRS4O14654 1257 aaPredicted RBP5□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 ARSHQ5FYA8 562 aa5□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 OVOS1Q6IE37 1185 aa5□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 FAM129CQ86XR2 697 aa5□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 SIRT2Q8IXJ6 389 aa5□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 ZNF655Q8N720 491 aaPredicted RBP5□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 FBXO27Q8NI29 283 aa5□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 SMARCC1Q92922 1105 aaPredicted RBP5□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 SPON2Q9BUD6 331 aa5□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 COPRSQ9NQ92 184 aa5□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 CNOT11Q9UKZ1 510 aaKnown RBP5□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 ZNF281Q9Y2X9 895 aa5□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 PCDHA11Q9Y5I1 949 aa5□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 F6X3S4 739 aa4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 K7ESM1 405 aa4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 SCAMP3O14828 347 aaKnown RBP4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 TLR3O15455 904 aaKnown RBP4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 DNAJA2O60884 412 aa4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 CLEC3AO75596 197 aa4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 UBOX5O94941 541 aa4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 FSHBP01225 129 aa4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 NME1P15531 152 aaKnown RBP4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 VIPR1P32241 457 aa4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 NMIQ13287 307 aaPredicted RBP4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 NBPF12Q5TAG4 269 aaPredicted RBP4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 TP53I13Q8NBR0 393 aaPredicted RBP4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 RBBP8NLQ8NC74 664 aaPredicted RBP4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 RNF34Q969K3 372 aa4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 ATG4CQ96DT6 458 aa4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 DHRS1Q96LJ7 313 aa4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 SORCS2Q96PQ0 1159 aa4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 KIF2CQ99661 725 aa4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 HDAC8Q9BY41 377 aa4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 ZNRF3Q9ULT6 936 aa4.99□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 NOTOA8MTQ0 251 aa4.98□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 MATN3O15232 486 aa4.98□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 KIR2DL1P43626 348 aaPredicted RBP4.98□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 KIR2DL2P43627 348 aaPredicted RBP4.98□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 CRKP46108 304 aa4.98□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 PCBP3P57721 371 aaKnown RBP4.98□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 FANCCQ00597 558 aa4.98□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 ZNF827Q17R98 1081 aa4.98□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 NBPF9Q3BBW0 867 aa4.98□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 SEZ6Q53EL9 994 aa4.98□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 ZFYVE27Q5T4F4 411 aa4.98□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 NLRX1Q86UT6 975 aa4.98□□□□□ -1.61
NPHP3-ACAD11-202ENST00000632629 USP48Q86UV5 1035 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms