RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 ANKRD20A12PQ8NF67 263 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 CCDC148Q8NFR7 591 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 CCDC51Q96ER9 411 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 TRAIPQ9BWF2 469 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 TCP11L1Q9NUJ3 509 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 ADD3Q9UEY8 706 aaKnown RBP9.13□□□□□ -0.95
GPC3-204ENST00000631057 PCDHA4Q9UN74 947 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 CTNND2Q9UQB3 1225 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 DDX60LQ5H9U9 1706 aaKnown RBP9.13□□□□□ -0.95
GPC3-204ENST00000631057 XDHP47989 1333 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 ITIH6Q6UXX5 1313 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 THSD7AQ9UPZ6 1657 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 URI1O94763 535 aaPredicted RBP9.12□□□□□ -0.95
GPC3-204ENST00000631057 CCDC175P0C221 793 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 H2AFXP16104 143 aaPredicted RBP9.12□□□□□ -0.95
GPC3-204ENST00000631057 TM4SF1P30408 202 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 CASQ1P31415 396 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 MCM7P33993 719 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 PBX1P40424 430 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 KCNQ4P56696 695 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 STX17P56962 302 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 PPP4CP60510 307 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 EVX2Q03828 476 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 DMTNQ08495 405 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 SEMA3FQ13275 785 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 PTPN21Q16825 1174 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 ZNF772Q68DY9 489 aaPredicted RBP9.12□□□□□ -0.95
GPC3-204ENST00000631057 ZNF804AQ7Z570 1209 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 CNGA4Q8IV77 575 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 KRT222Q8N1A0 295 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 IGSF22Q8N9C0 903 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 DAGLBQ8NCG7 672 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 UBXN4Q92575 508 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 LZTS2Q9BRK4 669 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 MFRPQ9BY79 579 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 FAM117AQ9C073 453 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 MKNK2Q9HBH9 465 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 ZNF287Q9HBT7 754 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 ARGLU1Q9NWB6 273 aaPredicted RBP9.12□□□□□ -0.95
GPC3-204ENST00000631057 ANKIB1Q9P2G1 1089 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 MKRN1Q9UHC7 482 aaKnown RBP9.12□□□□□ -0.95
GPC3-204ENST00000631057 RWDD2AQ9UIY3 292 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 CCNL1Q9UK58 526 aaPredicted RBP9.12□□□□□ -0.95
GPC3-204ENST00000631057 ARIH1Q9Y4X5 557 aaPredicted RBP9.12□□□□□ -0.95
GPC3-204ENST00000631057 CCDC194A0A1B0GVG4 234 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 EFCAB8A8MWE9 144 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 LAD1O00515 517 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 TEX33O43247 280 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 RAD21O60216 631 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 TADA3O75528 432 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 TSPY3P0CV98 308 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 TSPY8P0CW00 308 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 ZSCAN20P17040 1043 aaPredicted RBP9.12□□□□□ -0.95
GPC3-204ENST00000631057 CASP1P29466 404 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 GNG11P61952 73 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 GABPB1Q06547 395 aaPredicted RBP9.12□□□□□ -0.95
GPC3-204ENST00000631057 PAK1Q13153 545 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 GRAPQ13588 217 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 TRIM14Q14142 442 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 ERCC6LQ2NKX8 1250 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 ZNF658Q5TYW1 1059 aaPredicted RBP9.12□□□□□ -0.95
GPC3-204ENST00000631057 RRAGBQ5VZM2 374 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 C15orf52Q6ZUT6 534 aaKnown RBP9.12□□□□□ -0.95
GPC3-204ENST00000631057 TOGARAM2Q6ZUX3 1019 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 TXNRD3Q86VQ6 643 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 GRAPLQ8TC17 118 aaPredicted RBP9.12□□□□□ -0.95
GPC3-204ENST00000631057 SH3RF3Q8TEJ3 882 aaPredicted RBP9.12□□□□□ -0.95
GPC3-204ENST00000631057 PRDM10Q9NQV6 1147 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 LIMA1Q9UHB6 759 aaKnown RBP9.12□□□□□ -0.95
GPC3-204ENST00000631057 PARP3Q9Y6F1 533 aa9.12□□□□□ -0.95
GPC3-204ENST00000631057 MFAP3LO75121 409 aa9.11□□□□□ -0.95
GPC3-204ENST00000631057 RPN1P04843 607 aaKnown RBP9.11□□□□□ -0.95
GPC3-204ENST00000631057 MYL1P05976 194 aa9.11□□□□□ -0.95
GPC3-204ENST00000631057 STAT6P42226 847 aa9.11□□□□□ -0.95
GPC3-204ENST00000631057 RBL2Q08999 1139 aa9.11□□□□□ -0.95
GPC3-204ENST00000631057 IL17AQ16552 155 aa9.11□□□□□ -0.95
GPC3-204ENST00000631057 ARHGAP29Q52LW3 1261 aa9.11□□□□□ -0.95
GPC3-204ENST00000631057 ZNF467Q7Z7K2 595 aaPredicted RBP9.11□□□□□ -0.95
GPC3-204ENST00000631057 SMYD4Q8IYR2 804 aaPredicted RBP9.11□□□□□ -0.95
GPC3-204ENST00000631057 ZNF444Q8N0Y2 327 aaPredicted RBP9.11□□□□□ -0.95
GPC3-204ENST00000631057 C4orf32Q8N8J7 132 aa9.11□□□□□ -0.95
GPC3-204ENST00000631057 CCDC12Q8WUD4 166 aaPredicted RBP9.11□□□□□ -0.95
GPC3-204ENST00000631057 GPKOWQ92917 476 aaPredicted RBP eCLIP9.11□□□□□ -0.95
GPC3-204ENST00000631057 IL17RBQ9NRM6 502 aa9.11□□□□□ -0.95
GPC3-204ENST00000631057 MAD2L2Q9UI95 211 aa9.11□□□□□ -0.95
GPC3-204ENST00000631057 UBR3Q6ZT12 1888 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 LRRC10BA6NIK2 292 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 M0R2N6 131 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 STXBP3O00186 592 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 N4BP3O15049 544 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 VEGFAP15692 232 aaPredicted RBP9.1□□□□□ -0.95
GPC3-204ENST00000631057 PLCG2P16885 1265 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 FECHP22830 423 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 HMGB2P26583 209 aaKnown RBP9.1□□□□□ -0.95
GPC3-204ENST00000631057 RFC4P35249 363 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 PRPHP41219 470 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 STIM1Q13586 685 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 BMS1Q14692 1282 aaKnown RBP9.1□□□□□ -0.95
GPC3-204ENST00000631057 KRT31Q15323 416 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 RBM26Q5T8P6 1007 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms