RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 UBAC1Q9BSL1 405 aa21.87■■□□□ 1.09
PNKP-224ENST00000631020 PAGR1Q9BTK6 254 aa21.87■■□□□ 1.09
PNKP-224ENST00000631020 LRRC2Q9BYS8 371 aa21.87■■□□□ 1.09
PNKP-224ENST00000631020 PAK6Q9NQU5 681 aaPredicted RBP21.87■■□□□ 1.09
PNKP-224ENST00000631020 HOXC10Q9NYD6 342 aa21.87■■□□□ 1.09
PNKP-224ENST00000631020 A0A0G2JMZ2 1700 aa21.86■■□□□ 1.09
PNKP-224ENST00000631020 KIAA1755Q5JYT7 1200 aa21.86■■□□□ 1.09
PNKP-224ENST00000631020 U2AF1L4Q8WU68 220 aaKnown RBP21.86■■□□□ 1.09
PNKP-224ENST00000631020 TMEM47Q9BQJ4 181 aa21.86■■□□□ 1.09
PNKP-224ENST00000631020 UPF3BQ9BZI7 483 aaKnown RBP21.86■■□□□ 1.09
PNKP-224ENST00000631020 SPDYE16A6NNV3 312 aaPredicted RBP21.85■■□□□ 1.09
PNKP-224ENST00000631020 CNMDO75829 334 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 SGPL1O95470 568 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 RPS6KB1P23443 525 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 COG2Q14746 738 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 CCDC178Q5BJE1 867 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 RUFY3Q7L099 469 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 GPR142Q7Z601 462 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 UBE2Q1Q7Z7E8 422 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 LRRC47Q8N1G4 583 aaKnown RBP21.85■■□□□ 1.09
PNKP-224ENST00000631020 USP6NLQ92738 828 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 PORCNQ9H237 461 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 VCPKMTQ9H867 229 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 PEX10O60683 326 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 TMEM67Q5HYA8 995 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 MORN1Q5T089 497 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 PLEKHH3Q7Z736 793 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 PARP14Q460N5 1801 aa21.85■■□□□ 1.09
PNKP-224ENST00000631020 WDR19Q8NEZ3 1342 aa21.84■■□□□ 1.09
PNKP-224ENST00000631020 SH2B2O14492 632 aaPredicted RBP21.84■■□□□ 1.09
PNKP-224ENST00000631020 TOP1P11387 765 aaKnown RBP21.84■■□□□ 1.09
PNKP-224ENST00000631020 PPP4R3BQ5MIZ7 849 aa21.84■■□□□ 1.09
PNKP-224ENST00000631020 MB21D1Q8N884 522 aa21.84■■□□□ 1.09
PNKP-224ENST00000631020 TMEM87BQ96K49 555 aa21.84■■□□□ 1.09
PNKP-224ENST00000631020 MTA3Q9BTC8 594 aa21.84■■□□□ 1.09
PNKP-224ENST00000631020 LY9Q9HBG7 655 aa21.84■■□□□ 1.09
PNKP-224ENST00000631020 CYP46A1Q9Y6A2 500 aa21.84■■□□□ 1.09
PNKP-224ENST00000631020 WDR46O15213 610 aaKnown RBP21.83■■□□□ 1.09
PNKP-224ENST00000631020 RGS2P41220 211 aa21.83■■□□□ 1.09
PNKP-224ENST00000631020 SART3Q15020 963 aaKnown RBP21.83■■□□□ 1.09
PNKP-224ENST00000631020 TANGO6Q9C0B7 1094 aa21.83■■□□□ 1.09
PNKP-224ENST00000631020 CRISPLD2Q9H0B8 497 aa21.83■■□□□ 1.09
PNKP-224ENST00000631020 MYH4Q9Y623 1939 aa21.83■■□□□ 1.09
PNKP-224ENST00000631020 RPTORQ8N122 1335 aa21.83■■□□□ 1.08
PNKP-224ENST00000631020 ERICH2A1L162 156 aa21.82■■□□□ 1.08
PNKP-224ENST00000631020 F5H6K3 240 aa21.82■■□□□ 1.08
PNKP-224ENST00000631020 KLRC3Q07444 240 aa21.82■■□□□ 1.08
PNKP-224ENST00000631020 WTAPQ15007 396 aa21.82■■□□□ 1.08
PNKP-224ENST00000631020 IFIT1BQ5T764 474 aaKnown RBP21.82■■□□□ 1.08
PNKP-224ENST00000631020 SPICE1Q8N0Z3 855 aa21.82■■□□□ 1.08
PNKP-224ENST00000631020 TRIB2Q92519 343 aa21.82■■□□□ 1.08
PNKP-224ENST00000631020 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.82■■□□□ 1.08
PNKP-224ENST00000631020 BTBD7Q9P203 1132 aa21.82■■□□□ 1.08
PNKP-224ENST00000631020 SYNPO2Q9UMS6 1093 aa21.82■■□□□ 1.08
PNKP-224ENST00000631020 CYP2B6P20813 491 aa21.81■■□□□ 1.08
PNKP-224ENST00000631020 MAP3K21Q5TCX8 1036 aa21.81■■□□□ 1.08
PNKP-224ENST00000631020 Q6ZUG5 572 aa21.81■■□□□ 1.08
PNKP-224ENST00000631020 DEFB118Q96PH6 123 aa21.81■■□□□ 1.08
PNKP-224ENST00000631020 APBA2Q99767 749 aa21.81■■□□□ 1.08
PNKP-224ENST00000631020 ZNF236Q9UL36 1845 aa21.81■■□□□ 1.08
PNKP-224ENST00000631020 SLC15A5A6NIM6 579 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 NDUFB10O96000 172 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 LIFRP42702 1097 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 MAP2K5Q13163 448 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 RASGRP2Q7LDG7 609 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 GMCL1P1Q8NEA9 526 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 CHMP4CQ96CF2 233 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 KAT14Q9H8E8 782 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 CWC22Q9HCG8 908 aaKnown RBP21.8■■□□□ 1.08
PNKP-224ENST00000631020 GOPCQ9HD26 462 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 HMX1Q9NP08 348 aaPredicted RBP21.8■■□□□ 1.08
PNKP-224ENST00000631020 RAD21O60216 631 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 DSG3P32926 999 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 FBXL16Q8N461 479 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 PNMA1Q8ND90 353 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 SHCBP1Q8NEM2 672 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 AGXT2Q9BYV1 514 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 PDRG1Q9NUG6 133 aa21.8■■□□□ 1.08
PNKP-224ENST00000631020 FARP2O94887 1054 aaPredicted RBP21.79■■□□□ 1.08
PNKP-224ENST00000631020 HOXC6P09630 235 aa21.79■■□□□ 1.08
PNKP-224ENST00000631020 PTPREP23469 700 aa21.79■■□□□ 1.08
PNKP-224ENST00000631020 NEK4P51957 841 aa21.79■■□□□ 1.08
PNKP-224ENST00000631020 TOB2Q14106 344 aaPredicted RBP21.79■■□□□ 1.08
PNKP-224ENST00000631020 SLFN13Q68D06 897 aa21.79■■□□□ 1.08
PNKP-224ENST00000631020 SGMS1Q86VZ5 419 aa21.79■■□□□ 1.08
PNKP-224ENST00000631020 TMTC2Q8N394 836 aa21.79■■□□□ 1.08
PNKP-224ENST00000631020 ANKLE1Q8NAG6 615 aa21.79■■□□□ 1.08
PNKP-224ENST00000631020 NUP88Q99567 741 aaPredicted RBP21.79■■□□□ 1.08
PNKP-224ENST00000631020 HTATIP2Q9BUP3 242 aa21.79■■□□□ 1.08
PNKP-224ENST00000631020 MTMR7Q9Y216 660 aa21.79■■□□□ 1.08
PNKP-224ENST00000631020 IVNS1ABPQ9Y6Y0 642 aa21.79■■□□□ 1.08
PNKP-224ENST00000631020 STRNO43815 780 aa21.78■■□□□ 1.08
PNKP-224ENST00000631020 FLOT1O75955 427 aa21.78■■□□□ 1.08
PNKP-224ENST00000631020 TFRCP02786 760 aaKnown RBP21.78■■□□□ 1.08
PNKP-224ENST00000631020 GRB14Q14449 540 aa21.78■■□□□ 1.08
PNKP-224ENST00000631020 BRF1Q92994 677 aa21.78■■□□□ 1.08
PNKP-224ENST00000631020 SPATC1LQ9H0A9 340 aa21.78■■□□□ 1.08
PNKP-224ENST00000631020 BRPF3Q9ULD4 1205 aa21.78■■□□□ 1.08
PNKP-224ENST00000631020 CEP290O15078 2479 aa21.78■■□□□ 1.08
PNKP-224ENST00000631020 GMCL1Q96IK5 515 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms