RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 TSPY2A6NKD2 308 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 POTECB2RU33 542 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 BHMG1C9JSJ3 638 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-213ENST00000630925 RTCAO00442 366 aaKnown RBP5.61□□□□□ -1.51
SDCBP-213ENST00000630925 RIMBP2O15034 1052 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 ERC2O15083 957 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 ADCY3O60266 1144 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 GREM1O60565 184 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 CPP00450 1065 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 ASGR2P07307 311 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 TSPY3P0CV98 308 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 TSPY8P0CW00 308 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 MUTP22033 750 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 IRS1P35568 1242 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 CHKAP35790 457 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 TSPY1Q01534 308 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 MAP3K10Q02779 954 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 IRGCQ6NXR0 463 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 UHMK1Q8TAS1 419 aaKnown RBP5.61□□□□□ -1.51
SDCBP-213ENST00000630925 COG1Q8WTW3 980 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 ZNF669Q96BR6 464 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-213ENST00000630925 HIC2Q96JB3 615 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 SGCZQ96LD1 299 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 CLUHP3Q96NS8 147 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 HAUS7Q99871 368 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 TRIM56Q9BRZ2 755 aaKnown RBP5.61□□□□□ -1.51
SDCBP-213ENST00000630925 KATNAL1Q9BW62 490 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 PDLIM7Q9NR12 457 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 HELLSQ9NRZ9 838 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.61□□□□□ -1.51
SDCBP-213ENST00000630925 RCAN3Q9UKA8 241 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 BLOC1S6Q9UL45 172 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 PTPN22Q9Y2R2 807 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 UHRF1BP1LA0JNW5 1464 aa5.61□□□□□ -1.51
SDCBP-213ENST00000630925 STXBP3O00186 592 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 MASP2O00187 686 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 PF4V1P10720 104 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 CRKP46108 304 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 USP14P54578 494 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 NRLP54845 237 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 ARHGAP29Q52LW3 1261 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 PRPF40BQ6NWY9 871 aaKnown RBP5.6□□□□□ -1.51
SDCBP-213ENST00000630925 TMEM92Q6UXU6 159 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 SAPCD2Q86UD0 394 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 SPATS2Q86XZ4 545 aaKnown RBP5.6□□□□□ -1.51
SDCBP-213ENST00000630925 MYLK4Q86YV6 388 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-213ENST00000630925 NRSN1Q8IZ57 195 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 RTKN2Q8IZC4 609 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 GABPB2Q8TAK5 448 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-213ENST00000630925 SCG3Q8WXD2 468 aaKnown RBP5.6□□□□□ -1.51
SDCBP-213ENST00000630925 STON2Q8WXE9 905 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 SLC7A3Q8WY07 619 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 TMEM74Q96NL1 305 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 KIF2CQ99661 725 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 RUSC1Q9BVN2 902 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 TTC37Q6PGP7 1564 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 SKILP12757 684 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 SMARCA1P28370 1054 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 RCAN1P53805 252 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 PWP1Q13610 501 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 C6orf118Q5T5N4 469 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 NUTM2GQ5VZR2 741 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 TLDC1Q6P9B6 456 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 ABRAXAS1Q6UWZ7 409 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 FAM196AQ6ZSG2 479 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.6□□□□□ -1.51
SDCBP-213ENST00000630925 MGARPQ8TDB4 240 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 ADAMTS18Q8TE60 1221 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 EPS8L3Q8TE67 593 aaKnown RBP5.6□□□□□ -1.51
SDCBP-213ENST00000630925 LEO1Q8WVC0 666 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-213ENST00000630925 HDAC2Q92769 488 aaKnown RBP5.6□□□□□ -1.51
SDCBP-213ENST00000630925 RHOVQ96L33 236 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 TSGA13Q96PP4 275 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 DHRS4Q9BTZ2 278 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.6□□□□□ -1.51
SDCBP-213ENST00000630925 CRYL1Q9Y2S2 319 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 ATP6V0A2Q9Y487 856 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 MAP4K5Q9Y4K4 846 aa5.6□□□□□ -1.51
SDCBP-213ENST00000630925 KDM5BQ9UGL1 1544 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 B2RBV5 119 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 RASA4O43374 803 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 F12P00748 615 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-213ENST00000630925 SLC4A1P02730 911 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 PDGFAP04085 211 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 CYP11A1P05108 521 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 SDSP20132 328 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 BTF3P20290 206 aaKnown RBP5.59□□□□□ -1.51
SDCBP-213ENST00000630925 GBP2P32456 591 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-213ENST00000630925 CD86P42081 329 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 TMF1P82094 1093 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 KCNC4Q03721 635 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 GTF2H3Q13889 308 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 PTPN21Q16825 1174 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 LONRF2Q1L5Z9 754 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 SLC10A6Q3KNW5 377 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 MRM1Q6IN84 353 aaKnown RBP5.59□□□□□ -1.51
SDCBP-213ENST00000630925 CNNM4Q6P4Q7 775 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 C4orf50Q6ZRC1 276 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 SDCCAG8Q86SQ7 713 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-213ENST00000630925 FCHSD1Q86WN1 690 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms