RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 USP17L12C9JPN9 530 aa24.23■■□□□ 1.47
TARDBP-228ENST00000629725 USP17L21D6R901 530 aa24.23■■□□□ 1.47
TARDBP-228ENST00000629725 IFIT2P09913 472 aaKnown RBP24.23■■□□□ 1.47
TARDBP-228ENST00000629725 CCSAPQ6IQ19 270 aaPredicted RBP24.23■■□□□ 1.47
TARDBP-228ENST00000629725 CCDC174Q6PII3 467 aa24.23■■□□□ 1.47
TARDBP-228ENST00000629725 DDRGK1Q96HY6 314 aa24.23■■□□□ 1.47
TARDBP-228ENST00000629725 GLT1D1Q96MS3 346 aa24.23■■□□□ 1.47
TARDBP-228ENST00000629725 GAS2L1Q99501 681 aaPredicted RBP24.23■■□□□ 1.47
TARDBP-228ENST00000629725 MYO9BQ13459 2157 aa24.23■■□□□ 1.47
TARDBP-228ENST00000629725 ELP1O95163 1332 aa24.22■■□□□ 1.47
TARDBP-228ENST00000629725 SNAI1O95863 264 aaPredicted RBP24.22■■□□□ 1.47
TARDBP-228ENST00000629725 ADD2P35612 726 aa24.22■■□□□ 1.47
TARDBP-228ENST00000629725 PPIGQ13427 754 aaKnown RBP eCLIP24.22■■□□□ 1.476e-7■□□□□ 8.8
TARDBP-228ENST00000629725 SLFNL1Q499Z3 407 aa24.22■■□□□ 1.47
TARDBP-228ENST00000629725 MAMDC4Q6UXC1 1216 aa24.22■■□□□ 1.47
TARDBP-228ENST00000629725 CCDC129Q6ZRS4 1044 aa24.22■■□□□ 1.47
TARDBP-228ENST00000629725 DDX11Q96FC9 970 aa24.22■■□□□ 1.47
TARDBP-228ENST00000629725 TEX13BQ9BXU2 312 aa24.22■■□□□ 1.47
TARDBP-228ENST00000629725 ZHX1Q9UKY1 873 aaPredicted RBP24.22■■□□□ 1.47
TARDBP-228ENST00000629725 APBB1O00213 710 aa24.21■■□□□ 1.47
TARDBP-228ENST00000629725 DUSP11O75319 330 aaKnown RBP24.21■■□□□ 1.47
TARDBP-228ENST00000629725 COL9A1P20849 921 aa24.21■■□□□ 1.47
TARDBP-228ENST00000629725 TMEM240Q5SV17 173 aa24.21■■□□□ 1.47
TARDBP-228ENST00000629725 SNRNP48Q6IEG0 339 aaKnown RBP24.21■■□□□ 1.47
TARDBP-228ENST00000629725 PPM1EQ8WY54 764 aa24.21■■□□□ 1.47
TARDBP-228ENST00000629725 KIF1BPQ96EK5 621 aa24.21■■□□□ 1.47
TARDBP-228ENST00000629725 PBX4Q9BYU1 374 aa24.21■■□□□ 1.47
TARDBP-228ENST00000629725 PAG1Q9NWQ8 432 aa24.21■■□□□ 1.47
TARDBP-228ENST00000629725 MYH7P12883 1935 aa24.21■■□□□ 1.47
TARDBP-228ENST00000629725 MYADML2A6NDP7 307 aa24.2■■□□□ 1.46
TARDBP-228ENST00000629725 C6orf222P0C671 652 aaPredicted RBP24.2■■□□□ 1.46
TARDBP-228ENST00000629725 CST5P28325 142 aaPredicted RBP24.2■■□□□ 1.46
TARDBP-228ENST00000629725 PBX2P40425 430 aa24.2■■□□□ 1.46
TARDBP-228ENST00000629725 C16orf59Q7L2K0 433 aa24.2■■□□□ 1.46
TARDBP-228ENST00000629725 PCSK9Q8NBP7 692 aaKnown RBP24.2■■□□□ 1.46
TARDBP-228ENST00000629725 VTI1AQ96AJ9 217 aa24.2■■□□□ 1.46
TARDBP-228ENST00000629725 SLF1Q9BQI6 1058 aa24.2■■□□□ 1.46
TARDBP-228ENST00000629725 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.2■■□□□ 1.462e-12■□□□□ 8.7
TARDBP-228ENST00000629725 BCL11AQ9H165 835 aa24.2■■□□□ 1.46
TARDBP-228ENST00000629725 CHD7Q9P2D1 2997 aa24.2■■□□□ 1.46
TARDBP-228ENST00000629725 REV3LO60673 3130 aa24.19■■□□□ 1.46
TARDBP-228ENST00000629725 ASGR1P07306 291 aa24.19■■□□□ 1.46
TARDBP-228ENST00000629725 CSF2RAP15509 400 aa24.19■■□□□ 1.46
TARDBP-228ENST00000629725 CDK7P50613 346 aa24.19■■□□□ 1.46
TARDBP-228ENST00000629725 TMEM199Q8N511 208 aa24.19■■□□□ 1.46
TARDBP-228ENST00000629725 ATXN2LQ8WWM7 1075 aaKnown RBP24.19■■□□□ 1.46
TARDBP-228ENST00000629725 SPC25Q9HBM1 224 aa24.19■■□□□ 1.46
TARDBP-228ENST00000629725 RIPK3Q9Y572 518 aa24.19■■□□□ 1.46
TARDBP-228ENST00000629725 MCM3APO60318 1980 aa24.19■■□□□ 1.46
TARDBP-228ENST00000629725 GREB1LQ9C091 1923 aaPredicted RBP24.18■■□□□ 1.46
TARDBP-228ENST00000629725 DNAJC25-GNG10A0A024R161 153 aa24.18■■□□□ 1.46
TARDBP-228ENST00000629725 GRXCR1A8MXD5 290 aa24.18■■□□□ 1.46
TARDBP-228ENST00000629725 ACVR2BQ13705 512 aa24.18■■□□□ 1.46
TARDBP-228ENST00000629725 AKNAD1Q5T1N1 836 aa24.18■■□□□ 1.46
TARDBP-228ENST00000629725 RASIP1Q5U651 963 aa24.18■■□□□ 1.46
TARDBP-228ENST00000629725 CTR9Q6PD62 1173 aa24.18■■□□□ 1.46
TARDBP-228ENST00000629725 ZNF467Q7Z7K2 595 aaPredicted RBP24.18■■□□□ 1.46
TARDBP-228ENST00000629725 NUP88Q99567 741 aaPredicted RBP24.18■■□□□ 1.46
TARDBP-228ENST00000629725 BOLA2Q9H3K6 86 aa24.18■■□□□ 1.46
TARDBP-228ENST00000629725 PRDM12Q9H4Q4 367 aa24.18■■□□□ 1.46
TARDBP-228ENST00000629725 SLC4A4Q9Y6R1 1079 aa24.18■■□□□ 1.46
TARDBP-228ENST00000629725 SLC4A3P48751 1232 aa24.17■■□□□ 1.46
TARDBP-228ENST00000629725 IRX5P78411 483 aaPredicted RBP24.17■■□□□ 1.46
TARDBP-228ENST00000629725 PSRC1Q6PGN9 363 aaPredicted RBP24.17■■□□□ 1.46
TARDBP-228ENST00000629725 PRPF38AQ8NAV1 312 aaKnown RBP24.17■■□□□ 1.46
TARDBP-228ENST00000629725 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.17■■□□□ 1.46
TARDBP-228ENST00000629725 ZBED9Q6R2W3 1325 aa24.16■■□□□ 1.46
TARDBP-228ENST00000629725 A0A0U1RQG5 324 aaPredicted RBP24.16■■□□□ 1.46
TARDBP-228ENST00000629725 ARVCFO00192 962 aa24.16■■□□□ 1.46
TARDBP-228ENST00000629725 ACRP10323 421 aa24.16■■□□□ 1.46
TARDBP-228ENST00000629725 ZNF365Q70YC5 407 aa24.16■■□□□ 1.46
TARDBP-228ENST00000629725 ABHD16BQ9H3Z7 469 aa24.16■■□□□ 1.46
TARDBP-228ENST00000629725 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.16■■□□□ 1.46
TARDBP-228ENST00000629725 THEGQ9P2T0 379 aa24.16■■□□□ 1.46
TARDBP-228ENST00000629725 TLR3O15455 904 aaKnown RBP24.15■■□□□ 1.46
TARDBP-228ENST00000629725 ADCY6O43306 1168 aa24.15■■□□□ 1.46
TARDBP-228ENST00000629725 CHGBP05060 677 aa24.15■■□□□ 1.46
TARDBP-228ENST00000629725 GJA9P57773 515 aa24.15■■□□□ 1.46
TARDBP-228ENST00000629725 UBE3CQ15386 1083 aa24.15■■□□□ 1.46
TARDBP-228ENST00000629725 CCDC144BQ3MJ40 725 aa24.15■■□□□ 1.46
TARDBP-228ENST00000629725 GNASQ5JWF2 1037 aa24.15■■□□□ 1.46
TARDBP-228ENST00000629725 FAM126BQ8IXS8 530 aa24.15■■□□□ 1.46
TARDBP-228ENST00000629725 CPXCR1Q8N123 301 aa24.15■■□□□ 1.46
TARDBP-228ENST00000629725 ASB2Q96Q27 587 aa24.15■■□□□ 1.46
TARDBP-228ENST00000629725 PPP1R12CQ9BZL4 782 aa24.15■■□□□ 1.46
TARDBP-228ENST00000629725 CTDP1Q9Y5B0 961 aaPredicted RBP24.15■■□□□ 1.46
TARDBP-228ENST00000629725 GBF1Q92538 1859 aa24.15■■□□□ 1.46
TARDBP-228ENST00000629725 MYH4Q9Y623 1939 aa24.14■■□□□ 1.46
TARDBP-228ENST00000629725 F5H6K3 240 aa24.14■■□□□ 1.45
TARDBP-228ENST00000629725 ATP2A1O14983 1001 aa24.14■■□□□ 1.45
TARDBP-228ENST00000629725 ZBED4O75132 1171 aa24.14■■□□□ 1.45
TARDBP-228ENST00000629725 ATP5JP18859 108 aa24.14■■□□□ 1.45
TARDBP-228ENST00000629725 KLRC3Q07444 240 aa24.14■■□□□ 1.45
TARDBP-228ENST00000629725 ANKRD35Q8N283 1001 aa24.14■■□□□ 1.45
TARDBP-228ENST00000629725 HAUS7Q99871 368 aa24.14■■□□□ 1.45
TARDBP-228ENST00000629725 UPF3AQ9H1J1 476 aaKnown RBP24.14■■□□□ 1.45
TARDBP-228ENST00000629725 ARPP21Q9UBL0 812 aaPredicted RBP24.14■■□□□ 1.45
TARDBP-228ENST00000629725 MSRAQ9UJ68 235 aa24.14■■□□□ 1.45
TARDBP-228ENST00000629725 NCOR1O75376 2440 aa24.13■■□□□ 1.45
TARDBP-228ENST00000629725 BDP1A6H8Y1 2624 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms