RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 VSIG1Q86XK7 387 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 RAB17Q9H0T7 212 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 NUCKS1Q9H1E3 243 aaKnown RBP12.93□□□□□ -0.34
SHPRH-211ENST00000629427 COX16Q9P0S2 106 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 FEZ2Q9UHY8 353 aaPredicted RBP12.93□□□□□ -0.34
SHPRH-211ENST00000629427 IL13P35225 146 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 POLA2Q14181 598 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 PARP2Q9UGN5 583 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 HOXB7P09629 217 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 HADHQ16836 314 aaKnown RBP12.93□□□□□ -0.34
SHPRH-211ENST00000629427 KAZNQ674X7 775 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 ABI1Q8IZP0 508 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 HAUS1Q96CS2 278 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 VCXQ9H320 206 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 CCPG1Q9ULG6 757 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 SGSM2O43147 1006 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 SAT1P21673 171 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 MAST1Q9Y2H9 1570 aa12.93□□□□□ -0.34
SHPRH-211ENST00000629427 FAM178BQ8IXR5 827 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 PPP1R12CQ9BZL4 782 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 C1orf112Q9NSG2 853 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 TBX22Q9Y458 520 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 ESYT2A0FGR8 921 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 ERVV-2B6SEH9 535 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 GSTA1P08263 222 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 GSTA2P09210 222 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 ATXN8OSP0DMR3 200 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 CLCN1P35523 988 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 BCAMP50895 628 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 TSTA3Q13630 321 aaPredicted RBP12.92□□□□□ -0.34
SHPRH-211ENST00000629427 FLAD1Q8NFF5 587 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 TSKSQ9UJT2 592 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 ARHGAP24Q8N264 748 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 NME8Q8N427 588 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 POMGNT1Q8WZA1 660 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 PBRM1Q86U86 1689 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 MYOCDQ8IZQ8 938 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 ERO1AQ96HE7 468 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 TEKT3Q9BXF9 490 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 DISC1Q9NRI5 854 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 KDRP35968 1356 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 CFAP43Q8NDM7 1665 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 PAK2Q13177 524 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 BLIDQ8IZY5 108 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 MIPOL1Q8TD10 442 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 PIK3C2GO75747 1445 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 KIF3CO14782 793 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 BUB1BO60566 1050 aaPredicted RBP12.92□□□□□ -0.34
SHPRH-211ENST00000629427 PDE6CP51160 858 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 CROCCP2Q86T23 111 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 GBP7Q8N8V2 638 aaPredicted RBP12.92□□□□□ -0.34
SHPRH-211ENST00000629427 TRIM56Q9BRZ2 755 aaKnown RBP12.92□□□□□ -0.34
SHPRH-211ENST00000629427 AKT3Q9Y243 479 aa12.92□□□□□ -0.34
SHPRH-211ENST00000629427 IGSF3O75054 1194 aa12.91□□□□□ -0.34
SHPRH-211ENST00000629427 PHBP35232 272 aa12.91□□□□□ -0.34
SHPRH-211ENST00000629427 KIF21AQ7Z4S6 1674 aa12.91□□□□□ -0.34
SHPRH-211ENST00000629427 GBP6Q6ZN66 633 aa12.91□□□□□ -0.34
SHPRH-211ENST00000629427 DSCC1Q9BVC3 393 aa12.91□□□□□ -0.34
SHPRH-211ENST00000629427 SEPT9Q9UHD8 586 aaPredicted RBP12.91□□□□□ -0.34
SHPRH-211ENST00000629427 PTPROQ16827 1216 aa12.91□□□□□ -0.34
SHPRH-211ENST00000629427 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.91□□□□□ -0.34
SHPRH-211ENST00000629427 ZNF496Q96IT1 587 aaPredicted RBP12.91□□□□□ -0.34
SHPRH-211ENST00000629427 RTEL1Q9NZ71 1219 aa12.91□□□□□ -0.34
SHPRH-211ENST00000629427 HESX1Q9UBX0 185 aa12.91□□□□□ -0.34
SHPRH-211ENST00000629427 SERTAD1Q9UHV2 236 aa12.91□□□□□ -0.34
SHPRH-211ENST00000629427 TLR3O15455 904 aaKnown RBP12.91□□□□□ -0.34
SHPRH-211ENST00000629427 U2AF2P26368 475 aaKnown RBP eCLIP12.91□□□□□ -0.346e-7■■■■□ 20
SHPRH-211ENST00000629427 ZNF75DP51815 510 aa12.91□□□□□ -0.34
SHPRH-211ENST00000629427 ZNF526Q8TF50 670 aaPredicted RBP12.91□□□□□ -0.34
SHPRH-211ENST00000629427 KIF9Q9HAQ2 790 aa12.91□□□□□ -0.34
SHPRH-211ENST00000629427 TMEM191BP0C7N4 346 aa12.91□□□□□ -0.34
SHPRH-211ENST00000629427 GOLGA8HP0CJ92 632 aa12.91□□□□□ -0.34
SHPRH-211ENST00000629427 ARMCX5Q6P1M9 558 aa12.91□□□□□ -0.34
SHPRH-211ENST00000629427 KLRF2D3W0D1 207 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 FAM160B1Q5W0V3 765 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 ZBTB38Q8NAP3 1195 aaPredicted RBP12.9□□□□□ -0.34
SHPRH-211ENST00000629427 PFDN6O15212 129 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 ADKP55263 362 aaKnown RBP12.9□□□□□ -0.34
SHPRH-211ENST00000629427 HS1BP3Q53T59 392 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 MCTP2Q6DN12 878 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 PNMA1Q8ND90 353 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 EDC3Q96F86 508 aaKnown RBP12.9□□□□□ -0.34
SHPRH-211ENST00000629427 CCDC68Q9H2F9 335 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 BTDP43251 543 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 ABCB5Q2M3G0 1257 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 Q3C1V9 767 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 PLA2G4DQ86XP0 818 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 IFNL3Q8IZI9 196 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 P3H4Q92791 437 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 VPS41P49754 854 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 ICA1Q05084 483 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 MORC3Q14149 939 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 ANKRD20A3Q5VUR7 823 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 KRT26Q7Z3Y9 468 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 GOLGA5Q8TBA6 731 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 ANAPC5Q9UJX4 755 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 KCNK3O14649 394 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 ANKRD42Q8N9B4 389 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 PPME1Q9Y570 386 aa12.9□□□□□ -0.34
SHPRH-211ENST00000629427 KCNJ18B7U540 433 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms