RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 ESR2Q92731 530 aa13.1□□□□□ -0.31
DDX41-219ENST00000629036 LRCH3Q96II8 777 aa13.1□□□□□ -0.31
DDX41-219ENST00000629036 ZKSCAN3Q9BRR0 538 aa13.1□□□□□ -0.31
DDX41-219ENST00000629036 SLC38A10Q9HBR0 1119 aa13.1□□□□□ -0.31
DDX41-219ENST00000629036 LAMA3Q16787 3333 aa13.1□□□□□ -0.31
DDX41-219ENST00000629036 ZNF536O15090 1300 aa13.1□□□□□ -0.31
DDX41-219ENST00000629036 E7EWF7 191 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 SOX1O00570 391 aaPredicted RBP13.09□□□□□ -0.31
DDX41-219ENST00000629036 ADCY3O60266 1144 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 HOXC6P09630 235 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 PDHBP11177 359 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 BMP3P12645 472 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 PTPREP23469 700 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 MCCP23508 829 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 HOXD10P28358 340 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 MNX1P50219 401 aaPredicted RBP13.09□□□□□ -0.31
DDX41-219ENST00000629036 TRIM32Q13049 653 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 MTFR1Q15390 333 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 PPP4R3BQ5MIZ7 849 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 MAP3K21Q5TCX8 1036 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 BTNL9Q6UXG8 535 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 PLEKHH3Q7Z736 793 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 RIOX2Q8IUF8 465 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 SLAIN1Q8ND83 568 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 SOCS4Q8WXH5 440 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 COA7Q96BR5 231 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 SHISA4Q96DD7 197 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 TTC14Q96N46 770 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 SENP2Q9HC62 589 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 TOMM22Q9NS69 142 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 FEM1BQ9UK73 627 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 RIPK3Q9Y572 518 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 TNKSO95271 1327 aa13.09□□□□□ -0.31
DDX41-219ENST00000629036 SLC27A2O14975 620 aa13.08□□□□□ -0.32
DDX41-219ENST00000629036 XRCC5P13010 732 aaKnown RBP13.08□□□□□ -0.32
DDX41-219ENST00000629036 ERCC3P19447 782 aa13.08□□□□□ -0.32
DDX41-219ENST00000629036 CCL14Q16627 93 aa13.08□□□□□ -0.32
DDX41-219ENST00000629036 TTBK2Q6IQ55 1244 aa13.08□□□□□ -0.32
DDX41-219ENST00000629036 KCTD1Q719H9 257 aa13.08□□□□□ -0.32
DDX41-219ENST00000629036 DGKHQ86XP1 1220 aa13.08□□□□□ -0.32
DDX41-219ENST00000629036 PRPF38AQ8NAV1 312 aaKnown RBP13.08□□□□□ -0.32
DDX41-219ENST00000629036 RAET1EQ8TD07 263 aa13.08□□□□□ -0.32
DDX41-219ENST00000629036 DCAF4Q8WV16 495 aa13.08□□□□□ -0.32
DDX41-219ENST00000629036 ZSCAN10Q96SZ4 725 aaPredicted RBP13.08□□□□□ -0.32
DDX41-219ENST00000629036 CNNM2Q9H8M5 875 aa13.08□□□□□ -0.32
DDX41-219ENST00000629036 FLRT1Q9NZU1 646 aa13.08□□□□□ -0.32
DDX41-219ENST00000629036 SLC15A5A6NIM6 579 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 TMEM232C9JQI7 657 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 RAD21O60216 631 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 INHAP05111 366 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 SLC1A4P43007 532 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 STAT2P52630 851 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 CCNA1P78396 465 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 ZNF543Q08ER8 600 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 MAP2K5Q13163 448 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 SLC35G1Q2M3R5 365 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 CREB3L3Q68CJ9 461 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 NPLOC4Q8TAT6 608 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 CHMP4CQ96CF2 233 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 APBA2Q99767 749 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 KRT23Q9C075 422 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 PRR12Q9ULL5 1215 aa13.07□□□□□ -0.32
DDX41-219ENST00000629036 COBLO75128 1261 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 TAL1P17542 331 aaPredicted RBP13.06□□□□□ -0.32
DDX41-219ENST00000629036 ADORA2AP29274 412 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 OAZ1P54368 228 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 FAM160B2Q86V87 743 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 RASEFQ8IZ41 740 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 ABRAQ8N0Z2 381 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 PNMA1Q8ND90 353 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 KCNB2Q92953 911 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 KIFC2Q96AC6 838 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 FGD4Q96M96 766 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 NUDT12Q9BQG2 462 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 TEX13BQ9BXU2 312 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 UNC93B1Q9H1C4 597 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 PRO3102Q9H379 93 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 MROH8Q9H579 483 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 ANO2Q9NQ90 1003 aa13.06□□□□□ -0.32
DDX41-219ENST00000629036 PAK6Q9NQU5 681 aaPredicted RBP13.06□□□□□ -0.32
DDX41-219ENST00000629036 FRMPD2Q68DX3 1309 aaPredicted RBP13.06□□□□□ -0.32
DDX41-219ENST00000629036 DNAJC25-GNG10A0A024R161 153 aa13.05□□□□□ -0.32
DDX41-219ENST00000629036 HMGCRP04035 888 aa13.05□□□□□ -0.32
DDX41-219ENST00000629036 CCL5P13501 91 aa13.05□□□□□ -0.32
DDX41-219ENST00000629036 CYP2B6P20813 491 aa13.05□□□□□ -0.32
DDX41-219ENST00000629036 STAT3P40763 770 aa13.05□□□□□ -0.32
DDX41-219ENST00000629036 RGS2P41220 211 aa13.05□□□□□ -0.32
DDX41-219ENST00000629036 SNRNP48Q6IEG0 339 aaKnown RBP13.05□□□□□ -0.32
DDX41-219ENST00000629036 SAMD1Q6SPF0 538 aaPredicted RBP13.05□□□□□ -0.32
DDX41-219ENST00000629036 UBE2Q1Q7Z7E8 422 aa13.05□□□□□ -0.32
DDX41-219ENST00000629036 IQCA1Q86XH1 822 aa13.05□□□□□ -0.32
DDX41-219ENST00000629036 IGDCC4Q8TDY8 1250 aa13.05□□□□□ -0.32
DDX41-219ENST00000629036 HTATIP2Q9BUP3 242 aa13.05□□□□□ -0.32
DDX41-219ENST00000629036 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
DDX41-219ENST00000629036 GPHNQ9NQX3 736 aaPredicted RBP13.05□□□□□ -0.32
DDX41-219ENST00000629036 NR2E3Q9Y5X4 410 aa13.05□□□□□ -0.32
DDX41-219ENST00000629036 KIAA1217Q5T5P2 1943 aa13.04□□□□□ -0.32
DDX41-219ENST00000629036 STRNO43815 780 aa13.04□□□□□ -0.32
DDX41-219ENST00000629036 SLC25A27O95847 323 aa13.04□□□□□ -0.32
DDX41-219ENST00000629036 SLC16A2P36021 539 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms