RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 DEXIO95424 95 aa14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 NT5C2P49902 561 aa14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 RBM46Q8TBY0 533 aaKnown RBP14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 PNMA3Q9UL41 463 aa14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 OPTNQ96CV9 577 aa14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 L3MBTL3Q96JM7 780 aaPredicted RBP14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 FMR1Q06787 632 aaKnown RBP eCLIP14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 FASTKD5Q7L8L6 764 aaKnown RBP14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 DRC7Q8IY82 874 aa14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 RPAP3Q9H6T3 665 aaPredicted RBP14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 NDUFB10O96000 172 aa14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 VGLL4Q14135 290 aa14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 DNTTIP2Q5QJE6 756 aaKnown RBP14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 FBXO11Q86XK2 927 aa14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 NBPF3Q9H094 633 aa14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 LY9Q9HBG7 655 aa14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 IRS2Q9Y4H2 1338 aa14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 GNA11P29992 359 aa14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 MRPL12P52815 198 aaKnown RBP14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 SYDE2Q5VT97 1194 aa14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 GPKOWQ92917 476 aaPredicted RBP eCLIP14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 LLPHQ9BRT6 129 aaKnown RBP14.23□□□□□ -0.13
SYNGAP1-207ENST00000628646 VPS54Q9P1Q0 977 aa14.22□□□□□ -0.13
SYNGAP1-207ENST00000628646 NYAP2Q9P242 653 aa14.22□□□□□ -0.13
SYNGAP1-207ENST00000628646 PCDHA1Q9Y5I3 950 aa14.22□□□□□ -0.13
SYNGAP1-207ENST00000628646 ZMYM6O95789 1325 aa14.22□□□□□ -0.13
SYNGAP1-207ENST00000628646 TOMM70O94826 608 aa14.22□□□□□ -0.13
SYNGAP1-207ENST00000628646 CALML3P27482 149 aa14.22□□□□□ -0.13
SYNGAP1-207ENST00000628646 CLMNQ96JQ2 1002 aa14.22□□□□□ -0.13
SYNGAP1-207ENST00000628646 PITPNM2Q9BZ72 1349 aa14.22□□□□□ -0.13
SYNGAP1-207ENST00000628646 GOLGA6L19H0YKK7 550 aa14.22□□□□□ -0.13
SYNGAP1-207ENST00000628646 CCDC192P0DO97 292 aa14.22□□□□□ -0.13
SYNGAP1-207ENST00000628646 FDPSP14324 419 aaKnown RBP14.22□□□□□ -0.13
SYNGAP1-207ENST00000628646 TAF1CQ15572 869 aaPredicted RBP14.22□□□□□ -0.13
SYNGAP1-207ENST00000628646 ANKRD35Q8N283 1001 aa14.22□□□□□ -0.13
SYNGAP1-207ENST00000628646 PIGSQ96S52 555 aa14.22□□□□□ -0.13
SYNGAP1-207ENST00000628646 MPHOSPH6Q99547 160 aaKnown RBP14.22□□□□□ -0.13
SYNGAP1-207ENST00000628646 ANKRD31Q8N7Z5 1873 aa14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 KIF22Q14807 665 aa14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 VCPKMTQ9H867 229 aa14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 USP25Q9UHP3 1055 aa14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 C19orf81C9J6K1 198 aa14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 PLEKHA8P1O95397 391 aa14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 JAKMIP3Q5VZ66 844 aa14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 RCSD1Q6JBY9 416 aa14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 SH3BP5LQ7L8J4 393 aa14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 JMYQ8N9B5 988 aa14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 TFIP11Q9UBB9 837 aaKnown RBP14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 MRVI1Q9Y6F6 885 aa14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 NPM3O75607 178 aaKnown RBP14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 CCNA1P78396 465 aa14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 FAM160B2Q86V87 743 aa14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 DCAF4Q8WV16 495 aa14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 SENP2Q9HC62 589 aa14.21□□□□□ -0.13
SYNGAP1-207ENST00000628646 ANTXR2P58335 489 aa14.21□□□□□ -0.14
SYNGAP1-207ENST00000628646 SLF1Q9BQI6 1058 aa14.21□□□□□ -0.14
SYNGAP1-207ENST00000628646 HOXC10Q9NYD6 342 aa14.21□□□□□ -0.14
SYNGAP1-207ENST00000628646 CCDC39Q9UFE4 941 aa14.21□□□□□ -0.14
SYNGAP1-207ENST00000628646 KCNJ14Q9UNX9 436 aa14.21□□□□□ -0.14
SYNGAP1-207ENST00000628646 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.21□□□□□ -0.14
SYNGAP1-207ENST00000628646 CETPP11597 493 aa14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 TTBK2Q6IQ55 1244 aa14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 TRMT1LQ7Z2T5 733 aaKnown RBP14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 NAP1L5Q96NT1 182 aaPredicted RBP14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 AMNQ9BXJ7 453 aa14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 USP17L15C9J2P7 530 aa14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 USP17L13C9JLJ4 530 aa14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 USP17L11C9JVI0 530 aa14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 USP17L18D6R9N7 530 aa14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 USP17L22D6RA61 530 aa14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 USP17L17D6RBQ6 530 aa14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 USP17L19D6RCP7 530 aa14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 USP17L20D6RJB6 530 aa14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 USP17L24Q0WX57 530 aa14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 KINO60870 393 aaKnown RBP14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 KLRG1Q96E93 195 aa14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 HPS5Q9UPZ3 1129 aa14.2□□□□□ -0.14
SYNGAP1-207ENST00000628646 BECN2A8MW95 431 aa14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 ME1P48163 572 aa14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 IGDCC4Q8TDY8 1250 aa14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 HOOK1Q9UJC3 728 aaKnown RBP14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 TMEM88BA6NKF7 163 aa14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 NR1I2O75469 434 aa14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 BACE1P56817 501 aa14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 CDC37Q16543 378 aaPredicted RBP14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 STAG2Q8N3U4 1231 aa14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 PRPF38AQ8NAV1 312 aaKnown RBP14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 COA7Q96BR5 231 aa14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 NUP62CLQ9H1M0 184 aa14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 TIAM2Q8IVF5 1701 aa14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 SMCO2A6NFE2 343 aa14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 ADCY5O95622 1261 aa14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 MYCLP12524 364 aaPredicted RBP14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 ADCY7P51828 1080 aa14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 SHROOM1Q2M3G4 852 aaPredicted RBP14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 LPAR1Q92633 364 aa14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 RAVER2Q9HCJ3 691 aaKnown RBP14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 MRPL11Q9Y3B7 192 aaKnown RBP14.19□□□□□ -0.14
SYNGAP1-207ENST00000628646 B4DLN1 442 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms