RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 USP17L13C9JLJ4 530 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 USP17L11C9JVI0 530 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 USP17L18D6R9N7 530 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 USP17L22D6RA61 530 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 USP17L17D6RBQ6 530 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 USP17L19D6RCP7 530 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 USP17L20D6RJB6 530 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 TRAK2O60296 914 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 SLC1A4P43007 532 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 USP17L24Q0WX57 530 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 CATSPERGQ6ZRH7 1159 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 FBXL16Q8N461 479 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 ASCC2Q9H1I8 757 aaPredicted RBP22.24■■□□□ 1.15
CNOT9-209ENST00000627282 BCRP11274 1271 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 CCDC83Q8IWF9 413 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 TMTC2Q8N394 836 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 DCAF4Q8WV16 495 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 TANGO6Q9C0B7 1094 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 PNMA3Q9UL41 463 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 SMC3Q9UQE7 1217 aa22.24■■□□□ 1.15
CNOT9-209ENST00000627282 GOLGA6L22H0YM25 854 aa22.23■■□□□ 1.15
CNOT9-209ENST00000627282 BMP3P12645 472 aa22.23■■□□□ 1.15
CNOT9-209ENST00000627282 TROAPQ12815 778 aa22.23■■□□□ 1.15
CNOT9-209ENST00000627282 PABPC4Q13310 644 aaKnown RBP eCLIP22.23■■□□□ 1.15
CNOT9-209ENST00000627282 KIF22Q14807 665 aa22.23■■□□□ 1.15
CNOT9-209ENST00000627282 NFXL1Q6ZNB6 911 aa22.23■■□□□ 1.15
CNOT9-209ENST00000627282 KCTD1Q719H9 257 aa22.23■■□□□ 1.15
CNOT9-209ENST00000627282 SMCR8Q8TEV9 937 aaPredicted RBP22.23■■□□□ 1.15
CNOT9-209ENST00000627282 BRF1Q92994 677 aa22.23■■□□□ 1.15
CNOT9-209ENST00000627282 ARHGAP39Q9C0H5 1083 aa22.23■■□□□ 1.15
CNOT9-209ENST00000627282 FBXO28Q9NVF7 368 aa22.23■■□□□ 1.15
CNOT9-209ENST00000627282 BRPF3Q9ULD4 1205 aa22.23■■□□□ 1.15
CNOT9-209ENST00000627282 RLFQ13129 1914 aa22.22■■□□□ 1.15
CNOT9-209ENST00000627282 ST3GAL1Q11201 340 aa22.22■■□□□ 1.15
CNOT9-209ENST00000627282 ZNF654Q8IZM8 581 aa22.22■■□□□ 1.15
CNOT9-209ENST00000627282 MYL10Q9BUA6 226 aa22.22■■□□□ 1.15
CNOT9-209ENST00000627282 PTPN22Q9Y2R2 807 aa22.22■■□□□ 1.15
CNOT9-209ENST00000627282 CCDC69A6NI79 296 aa22.21■■□□□ 1.15
CNOT9-209ENST00000627282 IRX3P78415 501 aaPredicted RBP22.21■■□□□ 1.15
CNOT9-209ENST00000627282 FGD1P98174 961 aa22.21■■□□□ 1.15
CNOT9-209ENST00000627282 ZNF543Q08ER8 600 aa22.21■■□□□ 1.15
CNOT9-209ENST00000627282 CCDC96Q2M329 555 aa22.21■■□□□ 1.15
CNOT9-209ENST00000627282 CATIPQ7Z7H3 387 aa22.21■■□□□ 1.15
CNOT9-209ENST00000627282 P2RX7Q99572 595 aaKnown RBP22.21■■□□□ 1.15
CNOT9-209ENST00000627282 FRMPD2Q68DX3 1309 aaPredicted RBP22.21■■□□□ 1.15
CNOT9-209ENST00000627282 OSBPP22059 807 aa22.2■■□□□ 1.15
CNOT9-209ENST00000627282 APOBRQ0VD83 1088 aa22.2■■□□□ 1.15
CNOT9-209ENST00000627282 SKOR2Q2VWA4 1001 aaPredicted RBP22.2■■□□□ 1.15
CNOT9-209ENST00000627282 APOA5Q6Q788 366 aa22.2■■□□□ 1.15
CNOT9-209ENST00000627282 POTEEQ6S8J3 1075 aa22.2■■□□□ 1.15
CNOT9-209ENST00000627282 SLC12A7Q9Y666 1083 aa22.2■■□□□ 1.15
CNOT9-209ENST00000627282 ZSWIM8A7E2V4 1837 aa22.2■■□□□ 1.14
CNOT9-209ENST00000627282 TMEM232C9JQI7 657 aa22.2■■□□□ 1.14
CNOT9-209ENST00000627282 FLOT1O75955 427 aa22.2■■□□□ 1.14
CNOT9-209ENST00000627282 DDAH1O94760 285 aa22.2■■□□□ 1.14
CNOT9-209ENST00000627282 GNRH1P01148 92 aa22.2■■□□□ 1.14
CNOT9-209ENST00000627282 GOLGA8HP0CJ92 632 aa22.2■■□□□ 1.14
CNOT9-209ENST00000627282 TTBK2Q6IQ55 1244 aa22.2■■□□□ 1.14
CNOT9-209ENST00000627282 RAB11FIP4Q86YS3 637 aa22.2■■□□□ 1.14
CNOT9-209ENST00000627282 GPCPD1Q9NPB8 672 aa22.2■■□□□ 1.14
CNOT9-209ENST00000627282 ISY1Q9ULR0 285 aaKnown RBP22.2■■□□□ 1.14
CNOT9-209ENST00000627282 PARP14Q460N5 1801 aa22.19■■□□□ 1.14
CNOT9-209ENST00000627282 KLF18A0A0U1RQI7 1052 aa22.19■■□□□ 1.14
CNOT9-209ENST00000627282 SPDYE16A6NNV3 312 aaPredicted RBP22.19■■□□□ 1.14
CNOT9-209ENST00000627282 RXRAP19793 462 aa22.19■■□□□ 1.14
CNOT9-209ENST00000627282 CTGFP29279 349 aa22.19■■□□□ 1.14
CNOT9-209ENST00000627282 HERVK_113P62684 666 aa22.19■■□□□ 1.14
CNOT9-209ENST00000627282 COG2Q14746 738 aa22.19■■□□□ 1.14
CNOT9-209ENST00000627282 GRM4Q14833 912 aa22.19■■□□□ 1.14
CNOT9-209ENST00000627282 NECAB1Q8N987 351 aa22.19■■□□□ 1.14
CNOT9-209ENST00000627282 NUP133Q8WUM0 1156 aa22.19■■□□□ 1.14
CNOT9-209ENST00000627282 TRIM47Q96LD4 638 aa22.19■■□□□ 1.14
CNOT9-209ENST00000627282 MAD2L2Q9UI95 211 aa22.19■■□□□ 1.14
CNOT9-209ENST00000627282 DSG3P32926 999 aa22.18■■□□□ 1.14
CNOT9-209ENST00000627282 PSMC4P43686 418 aa22.18■■□□□ 1.14
CNOT9-209ENST00000627282 EVCP57679 992 aa22.18■■□□□ 1.14
CNOT9-209ENST00000627282 GPATCH4Q5T3I0 446 aaKnown RBP22.18■■□□□ 1.14
CNOT9-209ENST00000627282 MCTP1Q6DN14 999 aa22.18■■□□□ 1.14
CNOT9-209ENST00000627282 STAG2Q8N3U4 1231 aa22.18■■□□□ 1.14
CNOT9-209ENST00000627282 FEM1BQ9UK73 627 aa22.18■■□□□ 1.14
CNOT9-209ENST00000627282 PPP1R9AQ9ULJ8 1098 aa22.18■■□□□ 1.14
CNOT9-209ENST00000627282 PARP1P09874 1014 aaKnown RBP22.17■■□□□ 1.14
CNOT9-209ENST00000627282 GJB2P29033 226 aa22.17■■□□□ 1.14
CNOT9-209ENST00000627282 GCLCP48506 637 aaPredicted RBP22.17■■□□□ 1.14
CNOT9-209ENST00000627282 STAT2P52630 851 aa22.17■■□□□ 1.14
CNOT9-209ENST00000627282 ASPRV1Q53RT3 343 aa22.17■■□□□ 1.14
CNOT9-209ENST00000627282 MICU3Q86XE3 530 aa22.17■■□□□ 1.14
CNOT9-209ENST00000627282 ATG4CQ96DT6 458 aa22.17■■□□□ 1.14
CNOT9-209ENST00000627282 SLF1Q9BQI6 1058 aa22.17■■□□□ 1.14
CNOT9-209ENST00000627282 MYPNQ86TC9 1320 aa22.17■■□□□ 1.14
CNOT9-209ENST00000627282 PALM3A6NDB9 673 aaPredicted RBP22.17■■□□□ 1.14
CNOT9-209ENST00000627282 PLA2G6O60733 806 aa22.17■■□□□ 1.14
CNOT9-209ENST00000627282 SLC16A2P36021 539 aa22.17■■□□□ 1.14
CNOT9-209ENST00000627282 SAMD1Q6SPF0 538 aaPredicted RBP22.17■■□□□ 1.14
CNOT9-209ENST00000627282 BTNL9Q6UXG8 535 aa22.17■■□□□ 1.14
CNOT9-209ENST00000627282 LBX2Q6XYB7 198 aa22.17■■□□□ 1.14
CNOT9-209ENST00000627282 KIFC2Q96AC6 838 aa22.17■■□□□ 1.14
CNOT9-209ENST00000627282 MAP3K14Q99558 947 aa22.17■■□□□ 1.14
CNOT9-209ENST00000627282 CPVLQ9H3G5 476 aa22.17■■□□□ 1.14
CNOT9-209ENST00000627282 HOXC10Q9NYD6 342 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms