RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.78□□□□□ -0.36
TCF4-253ENST00000626466 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.78□□□□□ -0.36
TCF4-253ENST00000626466 USP17L12C9JPN9 530 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 USP17L21D6R901 530 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 RAD21O60216 631 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 ACRP10323 421 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 COL9A1P20849 921 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 PTGS1P23219 599 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 ADD2P35612 726 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 STAT3P40763 770 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 ADGRE1Q14246 886 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 TTF1Q15361 905 aaPredicted RBP12.78□□□□□ -0.36
TCF4-253ENST00000626466 KCNA10Q16322 511 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 TJAP1Q5JTD0 557 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 TMEM240Q5SV17 173 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 TMED8Q6PL24 325 aaPredicted RBP12.78□□□□□ -0.36
TCF4-253ENST00000626466 C16orf86Q6ZW13 317 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 PANK1Q8TE04 598 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 PBX4Q9BYU1 374 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 PRDM12Q9H4Q4 367 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 ZHX1Q9UKY1 873 aaPredicted RBP12.78□□□□□ -0.36
TCF4-253ENST00000626466 BAZ2AQ9UIF9 1905 aaKnown RBP12.78□□□□□ -0.36
TCF4-253ENST00000626466 CDH23Q9H251 3354 aa12.78□□□□□ -0.36
TCF4-253ENST00000626466 PLXNA1Q9UIW2 1896 aa12.77□□□□□ -0.37
TCF4-253ENST00000626466 DNAJC25-GNG10A0A024R161 153 aa12.77□□□□□ -0.37
TCF4-253ENST00000626466 DCDC2CA8MYV0 355 aa12.77□□□□□ -0.37
TCF4-253ENST00000626466 TIMP1P01033 207 aa12.77□□□□□ -0.37
TCF4-253ENST00000626466 CSF2RAP15509 400 aa12.77□□□□□ -0.37
TCF4-253ENST00000626466 RASIP1Q5U651 963 aa12.77□□□□□ -0.37
TCF4-253ENST00000626466 ERC1Q8IUD2 1116 aa12.77□□□□□ -0.37
TCF4-253ENST00000626466 SYMPKQ92797 1274 aaKnown RBP12.77□□□□□ -0.37
TCF4-253ENST00000626466 TOX2Q96NM4 488 aa12.77□□□□□ -0.37
TCF4-253ENST00000626466 PPP1R12CQ9BZL4 782 aa12.77□□□□□ -0.37
TCF4-253ENST00000626466 BOLA2Q9H3K6 86 aa12.77□□□□□ -0.37
TCF4-253ENST00000626466 SH2D4AQ9H788 454 aa12.77□□□□□ -0.37
TCF4-253ENST00000626466 CNPY2Q9Y2B0 182 aa12.77□□□□□ -0.37
TCF4-253ENST00000626466 DIS3Q9Y2L1 958 aaKnown RBP12.77□□□□□ -0.37
TCF4-253ENST00000626466 TNFRSF10AO00220 468 aa12.76□□□□□ -0.37
TCF4-253ENST00000626466 CTAGE5O15320 804 aa12.76□□□□□ -0.37
TCF4-253ENST00000626466 CDK7P50613 346 aa12.76□□□□□ -0.37
TCF4-253ENST00000626466 SNRNP48Q6IEG0 339 aaKnown RBP12.76□□□□□ -0.37
TCF4-253ENST00000626466 MFSD5Q6N075 450 aa12.76□□□□□ -0.37
TCF4-253ENST00000626466 CTR9Q6PD62 1173 aa12.76□□□□□ -0.37
TCF4-253ENST00000626466 SIRT2Q8IXJ6 389 aa12.76□□□□□ -0.37
TCF4-253ENST00000626466 STK11IPQ8N1F8 1099 aa12.76□□□□□ -0.37
TCF4-253ENST00000626466 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.76□□□□□ -0.37
TCF4-253ENST00000626466 CCDC17Q96LX7 622 aa12.76□□□□□ -0.37
TCF4-253ENST00000626466 TSEN34Q9BSV6 310 aaKnown RBP12.76□□□□□ -0.37
TCF4-253ENST00000626466 ATP8A2Q9NTI2 1148 aa12.76□□□□□ -0.37
TCF4-253ENST00000626466 PAG1Q9NWQ8 432 aa12.76□□□□□ -0.37
TCF4-253ENST00000626466 CXXC1Q9P0U4 656 aaPredicted RBP12.76□□□□□ -0.37
TCF4-253ENST00000626466 ZBED9Q6R2W3 1325 aa12.76□□□□□ -0.37
TCF4-253ENST00000626466 ZNFX1Q9P2E3 1918 aaKnown RBP12.76□□□□□ -0.37
TCF4-253ENST00000626466 CCER2I3L3R5 266 aa12.75□□□□□ -0.37
TCF4-253ENST00000626466 NDUFB10O96000 172 aa12.75□□□□□ -0.37
TCF4-253ENST00000626466 C6orf222P0C671 652 aaPredicted RBP12.75□□□□□ -0.37
TCF4-253ENST00000626466 SLC4A3P48751 1232 aa12.75□□□□□ -0.37
TCF4-253ENST00000626466 UMODL1Q5DID0 1318 aa12.75□□□□□ -0.37
TCF4-253ENST00000626466 ZNF365Q70YC5 407 aa12.75□□□□□ -0.37
TCF4-253ENST00000626466 TEX13BQ9BXU2 312 aa12.75□□□□□ -0.37
TCF4-253ENST00000626466 GREB1LQ9C091 1923 aaPredicted RBP12.75□□□□□ -0.37
TCF4-253ENST00000626466 KANSL2Q9H9L4 492 aa12.75□□□□□ -0.37
TCF4-253ENST00000626466 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.75□□□□□ -0.37
TCF4-253ENST00000626466 FAM184BQ9ULE4 1060 aa12.75□□□□□ -0.37
TCF4-253ENST00000626466 YBX2Q9Y2T7 364 aaKnown RBP12.75□□□□□ -0.37
TCF4-253ENST00000626466 DDX49Q9Y6V7 483 aaKnown RBP12.75□□□□□ -0.37
TCF4-253ENST00000626466 MYH8P13535 1937 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 ASTN1O14525 1302 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 SYNGAP1Q96PV0 1343 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 MOXD2PA6NHM9 499 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 ASGR1P07306 291 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 IFIT2P09913 472 aaKnown RBP12.74□□□□□ -0.37
TCF4-253ENST00000626466 RASA1P20936 1047 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 CST5P28325 142 aaPredicted RBP12.74□□□□□ -0.37
TCF4-253ENST00000626466 CYP2C18P33260 490 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 BEX3Q00994 111 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 CCDC85BQ15834 202 aaPredicted RBP12.74□□□□□ -0.37
TCF4-253ENST00000626466 MAMDC4Q6UXC1 1216 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 CCDC129Q6ZRS4 1044 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 FAM126BQ8IXS8 530 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 CPXCR1Q8N123 301 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 CLASRPQ8N2M8 674 aaKnown RBP12.74□□□□□ -0.37
TCF4-253ENST00000626466 ADAMTS19Q8TE59 1207 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 NUP133Q8WUM0 1156 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 SLF1Q9BQI6 1058 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 KATNBL1Q9H079 304 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 PUS7LQ9H0K6 701 aaKnown RBP12.74□□□□□ -0.37
TCF4-253ENST00000626466 UPF3AQ9H1J1 476 aaKnown RBP12.74□□□□□ -0.37
TCF4-253ENST00000626466 NKX2-4Q9H2Z4 354 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 RAVER2Q9HCJ3 691 aaKnown RBP12.74□□□□□ -0.37
TCF4-253ENST00000626466 GOPCQ9HD26 462 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 SLC4A4Q9Y6R1 1079 aa12.74□□□□□ -0.37
TCF4-253ENST00000626466 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.73□□□□□ -0.37
TCF4-253ENST00000626466 DUSP11O75319 330 aaKnown RBP12.73□□□□□ -0.37
TCF4-253ENST00000626466 PPIGQ13427 754 aaKnown RBP eCLIP12.73□□□□□ -0.37
TCF4-253ENST00000626466 ACVR2BQ13705 512 aa12.73□□□□□ -0.37
TCF4-253ENST00000626466 CCDC144BQ3MJ40 725 aa12.73□□□□□ -0.37
TCF4-253ENST00000626466 KIF1BPQ96EK5 621 aa12.73□□□□□ -0.37
TCF4-253ENST00000626466 DDX11Q96FC9 970 aa12.73□□□□□ -0.37
TCF4-253ENST00000626466 GLT1D1Q96MS3 346 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms