RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 PTPREP23469 700 aa23.48■■□□□ 1.35
PNKP-219ENST00000626274 STAT3P40763 770 aa23.48■■□□□ 1.35
PNKP-219ENST00000626274 CREB3L3Q68CJ9 461 aa23.48■■□□□ 1.35
PNKP-219ENST00000626274 RASGRP2Q7LDG7 609 aa23.48■■□□□ 1.35
PNKP-219ENST00000626274 NCAPG2Q86XI2 1143 aa23.48■■□□□ 1.35
PNKP-219ENST00000626274 KAT14Q9H8E8 782 aa23.48■■□□□ 1.35
PNKP-219ENST00000626274 KIAA0100Q14667 2235 aaKnown RBP23.48■■□□□ 1.35
PNKP-219ENST00000626274 SLC15A5A6NIM6 579 aa23.47■■□□□ 1.35
PNKP-219ENST00000626274 PDHBP11177 359 aa23.47■■□□□ 1.35
PNKP-219ENST00000626274 CYP2B6P20813 491 aa23.47■■□□□ 1.35
PNKP-219ENST00000626274 MORN1Q5T089 497 aa23.47■■□□□ 1.35
PNKP-219ENST00000626274 RNF20Q5VTR2 975 aa23.47■■□□□ 1.35
PNKP-219ENST00000626274 RIOX2Q8IUF8 465 aa23.47■■□□□ 1.35
PNKP-219ENST00000626274 PNMA1Q8ND90 353 aa23.47■■□□□ 1.35
PNKP-219ENST00000626274 SLC38A10Q9HBR0 1119 aa23.47■■□□□ 1.35
PNKP-219ENST00000626274 BIN2Q9UBW5 565 aaPredicted RBP23.47■■□□□ 1.35
PNKP-219ENST00000626274 ATP2A1O14983 1001 aa23.46■■□□□ 1.35
PNKP-219ENST00000626274 STRNO43815 780 aa23.46■■□□□ 1.35
PNKP-219ENST00000626274 XRCC5P13010 732 aaKnown RBP23.46■■□□□ 1.35
PNKP-219ENST00000626274 ELNP15502 786 aa23.46■■□□□ 1.35
PNKP-219ENST00000626274 COPB2P35606 906 aa23.46■■□□□ 1.35
PNKP-219ENST00000626274 RGS2P41220 211 aa23.46■■□□□ 1.35
PNKP-219ENST00000626274 MAP2K5Q13163 448 aa23.46■■□□□ 1.35
PNKP-219ENST00000626274 SEC23AQ15436 765 aa23.46■■□□□ 1.35
PNKP-219ENST00000626274 IFIT1BQ5T764 474 aaKnown RBP23.46■■□□□ 1.35
PNKP-219ENST00000626274 USP6NLQ92738 828 aa23.46■■□□□ 1.35
PNKP-219ENST00000626274 TEX13BQ9BXU2 312 aa23.46■■□□□ 1.35
PNKP-219ENST00000626274 FRMPD2Q68DX3 1309 aaPredicted RBP23.45■■□□□ 1.34
PNKP-219ENST00000626274 SNHG28P0DPA3 235 aa23.45■■□□□ 1.34
PNKP-219ENST00000626274 OAZ1P54368 228 aa23.45■■□□□ 1.34
PNKP-219ENST00000626274 UBXN2AP68543 259 aa23.45■■□□□ 1.34
PNKP-219ENST00000626274 GRB14Q14449 540 aa23.45■■□□□ 1.34
PNKP-219ENST00000626274 MB21D2Q8IYB1 491 aaPredicted RBP23.45■■□□□ 1.34
PNKP-219ENST00000626274 CPXCR1Q8N123 301 aa23.45■■□□□ 1.34
PNKP-219ENST00000626274 PRR12Q9ULL5 1215 aa23.45■■□□□ 1.34
PNKP-219ENST00000626274 ZNF236Q9UL36 1845 aa23.45■■□□□ 1.34
PNKP-219ENST00000626274 ERICH2A1L162 156 aa23.44■■□□□ 1.34
PNKP-219ENST00000626274 IFIT3O14879 490 aaKnown RBP23.44■■□□□ 1.34
PNKP-219ENST00000626274 ZNF543Q08ER8 600 aa23.44■■□□□ 1.34
PNKP-219ENST00000626274 SART3Q15020 963 aaKnown RBP23.44■■□□□ 1.34
PNKP-219ENST00000626274 SNRNP48Q6IEG0 339 aaKnown RBP23.44■■□□□ 1.34
PNKP-219ENST00000626274 TTBK2Q6IQ55 1244 aa23.44■■□□□ 1.34
PNKP-219ENST00000626274 BTNL9Q6UXG8 535 aa23.44■■□□□ 1.34
PNKP-219ENST00000626274 RAVER2Q9HCJ3 691 aaKnown RBP23.44■■□□□ 1.34
PNKP-219ENST00000626274 GPCPD1Q9NPB8 672 aa23.44■■□□□ 1.34
PNKP-219ENST00000626274 RBBP6Q7Z6E9 1792 aaKnown RBP23.43■■□□□ 1.34
PNKP-219ENST00000626274 REC8O95072 547 aa23.43■■□□□ 1.34
PNKP-219ENST00000626274 SOX10P56693 466 aa23.43■■□□□ 1.34
PNKP-219ENST00000626274 GPATCH4Q5T3I0 446 aaKnown RBP23.43■■□□□ 1.34
PNKP-219ENST00000626274 TRMT44Q8IYL2 757 aaKnown RBP23.43■■□□□ 1.34
PNKP-219ENST00000626274 ABRAQ8N0Z2 381 aa23.43■■□□□ 1.34
PNKP-219ENST00000626274 APBA2Q99767 749 aa23.43■■□□□ 1.34
PNKP-219ENST00000626274 TMEM106CQ9BVX2 250 aa23.43■■□□□ 1.34
PNKP-219ENST00000626274 HTTP42858 3142 aa23.43■■□□□ 1.34
PNKP-219ENST00000626274 MYCP01106 439 aaPredicted RBP23.42■■□□□ 1.34
PNKP-219ENST00000626274 FCER1AP12319 257 aa23.42■■□□□ 1.34
PNKP-219ENST00000626274 SLC16A2P36021 539 aa23.42■■□□□ 1.34
PNKP-219ENST00000626274 SYDE2Q5VT97 1194 aa23.42■■□□□ 1.34
PNKP-219ENST00000626274 CHST3Q7LGC8 479 aa23.42■■□□□ 1.34
PNKP-219ENST00000626274 HMGCRP04035 888 aa23.41■■□□□ 1.34
PNKP-219ENST00000626274 INHAP05111 366 aa23.41■■□□□ 1.34
PNKP-219ENST00000626274 HOXC6P09630 235 aa23.41■■□□□ 1.34
PNKP-219ENST00000626274 ADORA2AP29274 412 aa23.41■■□□□ 1.34
PNKP-219ENST00000626274 MCM5P33992 734 aa23.41■■□□□ 1.34
PNKP-219ENST00000626274 SLC4A3P48751 1232 aa23.41■■□□□ 1.34
PNKP-219ENST00000626274 ANTXR2P58335 489 aa23.41■■□□□ 1.34
PNKP-219ENST00000626274 WTAPQ15007 396 aa23.41■■□□□ 1.34
PNKP-219ENST00000626274 DPP9Q86TI2 863 aa23.41■■□□□ 1.34
PNKP-219ENST00000626274 TRIB2Q92519 343 aa23.41■■□□□ 1.34
PNKP-219ENST00000626274 MTA3Q9BTC8 594 aa23.41■■□□□ 1.34
PNKP-219ENST00000626274 RIPK3Q9Y572 518 aa23.41■■□□□ 1.34
PNKP-219ENST00000626274 ZKSCAN1P17029 563 aaPredicted RBP23.4■■□□□ 1.34
PNKP-219ENST00000626274 KCTD2Q14681 263 aa23.4■■□□□ 1.34
PNKP-219ENST00000626274 MTFR1Q15390 333 aa23.4■■□□□ 1.34
PNKP-219ENST00000626274 ASPRV1Q53RT3 343 aa23.4■■□□□ 1.34
PNKP-219ENST00000626274 TMEM67Q5HYA8 995 aa23.4■■□□□ 1.34
PNKP-219ENST00000626274 MMP19Q99542 508 aa23.4■■□□□ 1.34
PNKP-219ENST00000626274 SMCHD1A6NHR9 2005 aa23.4■■□□□ 1.34
PNKP-219ENST00000626274 ZNF536O15090 1300 aa23.39■■□□□ 1.34
PNKP-219ENST00000626274 PLXNA1Q9UIW2 1896 aa23.39■■□□□ 1.34
PNKP-219ENST00000626274 PRC1O43663 620 aa23.39■■□□□ 1.33
PNKP-219ENST00000626274 GOLGA8HP0CJ92 632 aa23.39■■□□□ 1.33
PNKP-219ENST00000626274 TSGA10IPQ3SY00 556 aa23.39■■□□□ 1.33
PNKP-219ENST00000626274 CCDC174Q6PII3 467 aa23.39■■□□□ 1.33
PNKP-219ENST00000626274 IGDCC4Q8TDY8 1250 aa23.39■■□□□ 1.33
PNKP-219ENST00000626274 RANBP17Q9H2T7 1088 aaKnown RBP23.39■■□□□ 1.33
PNKP-219ENST00000626274 SLC5A4Q9NY91 659 aa23.39■■□□□ 1.33
PNKP-219ENST00000626274 MYH6P13533 1939 aa23.38■■□□□ 1.33
PNKP-219ENST00000626274 PARP1P09874 1014 aaKnown RBP23.38■■□□□ 1.33
PNKP-219ENST00000626274 CCL5P13501 91 aa23.38■■□□□ 1.33
PNKP-219ENST00000626274 SNAP25P60880 206 aa23.38■■□□□ 1.33
PNKP-219ENST00000626274 KRT32Q14532 448 aa23.38■■□□□ 1.33
PNKP-219ENST00000626274 CCL14Q16627 93 aa23.38■■□□□ 1.33
PNKP-219ENST00000626274 CHST13Q8NET6 341 aa23.38■■□□□ 1.33
PNKP-219ENST00000626274 NPLOC4Q8TAT6 608 aa23.38■■□□□ 1.33
PNKP-219ENST00000626274 TMEM87BQ96K49 555 aa23.38■■□□□ 1.33
PNKP-219ENST00000626274 FBXO40Q9UH90 709 aa23.38■■□□□ 1.33
PNKP-219ENST00000626274 COBLO75128 1261 aa23.37■■□□□ 1.33
PNKP-219ENST00000626274 HSPA4P34932 840 aa23.37■■□□□ 1.33
PNKP-219ENST00000626274 TKFCQ3LXA3 575 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms