RNA–Protein interactions for RNA: ENST00000624193.1

ATRX-215, Transcript of ATRX, chromatin remodeler, human

TSL 4

Gene ATRX, Length 463 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-215	ENST00000624193	SNRNP48	Q6IEG0	339 aa	Known RBP	18.38	■□□□□ 0.53
ATRX-215	ENST00000624193	ANKRD33	Q7Z3H0	272 aa		18.38	■□□□□ 0.53
ATRX-215	ENST00000624193	TSEN34	Q9BSV6	310 aa	Known RBP	18.38	■□□□□ 0.53
ATRX-215	ENST00000624193	TEX13B	Q9BXU2	312 aa		18.38	■□□□□ 0.53
ATRX-215	ENST00000624193	PUS7L	Q9H0K6	701 aa	Known RBP	18.38	■□□□□ 0.53
ATRX-215	ENST00000624193	ZBTB40	Q9NUA8	1239 aa		18.38	■□□□□ 0.53
ATRX-215	ENST00000624193	ARPP21	Q9UBL0	812 aa	Predicted RBP	18.38	■□□□□ 0.53
ATRX-215	ENST00000624193	ZHX1	Q9UKY1	873 aa	Predicted RBP	18.38	■□□□□ 0.53
ATRX-215	ENST00000624193	DDX19B	Q9UMR2	479 aa		18.38	■□□□□ 0.53
ATRX-215	ENST00000624193	COG6	Q9Y2V7	657 aa		18.38	■□□□□ 0.53
ATRX-215	ENST00000624193	DCDC2C	A8MYV0	355 aa		18.37	■□□□□ 0.53
ATRX-215	ENST00000624193	ZSCAN25	Q6NSZ9	544 aa		18.37	■□□□□ 0.53
ATRX-215	ENST00000624193	STK11IP	Q8N1F8	1099 aa		18.37	■□□□□ 0.53
ATRX-215	ENST00000624193	MSL3	Q8N5Y2	521 aa	Known RBP	18.37	■□□□□ 0.53
ATRX-215	ENST00000624193	NUP133	Q8WUM0	1156 aa		18.37	■□□□□ 0.53
ATRX-215	ENST00000624193	DDX11	Q96FC9	970 aa		18.37	■□□□□ 0.53
ATRX-215	ENST00000624193	TOX2	Q96NM4	488 aa		18.37	■□□□□ 0.53
ATRX-215	ENST00000624193	FAM184B	Q9ULE4	1060 aa		18.37	■□□□□ 0.53
ATRX-215	ENST00000624193	RIPK3	Q9Y572	518 aa		18.37	■□□□□ 0.53
ATRX-215	ENST00000624193	SYNGAP1	Q96PV0	1343 aa		18.37	■□□□□ 0.53
ATRX-215	ENST00000624193	MYH4	Q9Y623	1939 aa		18.37	■□□□□ 0.53
ATRX-215	ENST00000624193	EYS	Q5T1H1	3165 aa		18.36	■□□□□ 0.53
ATRX-215	ENST00000624193	MYADML2	A6NDP7	307 aa		18.36	■□□□□ 0.53
ATRX-215	ENST00000624193	SNAI1	O95863	264 aa	Predicted RBP	18.36	■□□□□ 0.53
ATRX-215	ENST00000624193	SLC4A3	P48751	1232 aa		18.36	■□□□□ 0.53
ATRX-215	ENST00000624193	KCNA10	Q16322	511 aa		18.36	■□□□□ 0.53
ATRX-215	ENST00000624193	KLHDC9	Q8NEP7	349 aa		18.36	■□□□□ 0.53
ATRX-215	ENST00000624193	MCM3AP	O60318	1980 aa		18.35	■□□□□ 0.53
ATRX-215	ENST00000624193	DNAJC25-GNG10	A0A024R161	153 aa		18.35	■□□□□ 0.53
ATRX-215	ENST00000624193	MOXD2P	A6NHM9	499 aa		18.35	■□□□□ 0.53
ATRX-215	ENST00000624193		F5H6K3	240 aa		18.35	■□□□□ 0.53
ATRX-215	ENST00000624193	NDUFB10	O96000	172 aa		18.35	■□□□□ 0.53
ATRX-215	ENST00000624193	RASA1	P20936	1047 aa		18.35	■□□□□ 0.53
ATRX-215	ENST00000624193	DNAJB2	P25686	324 aa		18.35	■□□□□ 0.53
ATRX-215	ENST00000624193	KLRC3	Q07444	240 aa		18.35	■□□□□ 0.53
ATRX-215	ENST00000624193	GRIN2C	Q14957	1233 aa		18.35	■□□□□ 0.53
ATRX-215	ENST00000624193	CCSAP	Q6IQ19	270 aa	Predicted RBP	18.35	■□□□□ 0.53
ATRX-215	ENST00000624193	MAMDC4	Q6UXC1	1216 aa		18.35	■□□□□ 0.53
ATRX-215	ENST00000624193	CPXCR1	Q8N123	301 aa		18.35	■□□□□ 0.53
ATRX-215	ENST00000624193	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	18.34	■□□□□ 0.53
ATRX-215	ENST00000624193	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	18.34	■□□□□ 0.53
ATRX-215	ENST00000624193	DUSP11	O75319	330 aa	Known RBP	18.34	■□□□□ 0.53
ATRX-215	ENST00000624193	TIMP1	P01033	207 aa		18.34	■□□□□ 0.53
ATRX-215	ENST00000624193	RRP1	P56182	461 aa	Known RBP	18.34	■□□□□ 0.53
ATRX-215	ENST00000624193	IRX5	P78411	483 aa	Predicted RBP	18.34	■□□□□ 0.53
ATRX-215	ENST00000624193	SBK1	Q52WX2	424 aa		18.34	■□□□□ 0.53
ATRX-215	ENST00000624193	PRPF38A	Q8NAV1	312 aa	Known RBP	18.34	■□□□□ 0.53
ATRX-215	ENST00000624193	STRBP	Q96SI9	672 aa	Known RBP	18.34	■□□□□ 0.53
ATRX-215	ENST00000624193	MKNK2	Q9HBH9	465 aa		18.34	■□□□□ 0.53
ATRX-215	ENST00000624193	NYAP2	Q9P242	653 aa		18.34	■□□□□ 0.53
ATRX-215	ENST00000624193	TBX21	Q9UL17	535 aa		18.34	■□□□□ 0.53
ATRX-215	ENST00000624193	ATP2A1	O14983	1001 aa		18.33	■□□□□ 0.52
ATRX-215	ENST00000624193	C6orf222	P0C671	652 aa	Predicted RBP	18.33	■□□□□ 0.52
ATRX-215	ENST00000624193	CST5	P28325	142 aa	Predicted RBP	18.33	■□□□□ 0.52
ATRX-215	ENST00000624193	ZNF467	Q7Z7K2	595 aa	Predicted RBP	18.33	■□□□□ 0.52
ATRX-215	ENST00000624193	KIFC2	Q96AC6	838 aa		18.33	■□□□□ 0.52
ATRX-215	ENST00000624193	GLT1D1	Q96MS3	346 aa		18.33	■□□□□ 0.52
ATRX-215	ENST00000624193	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	18.33	■□□□□ 0.52
ATRX-215	ENST00000624193	RAVER2	Q9HCJ3	691 aa	Known RBP	18.33	■□□□□ 0.52
ATRX-215	ENST00000624193	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	18.33	■□□□□ 0.52
ATRX-215	ENST00000624193	CTDP1	Q9Y5B0	961 aa	Predicted RBP	18.33	■□□□□ 0.52
ATRX-215	ENST00000624193	MROH7	Q68CQ1	1323 aa		18.32	■□□□□ 0.52
ATRX-215	ENST00000624193	GSG1L2	A8MUP6	293 aa		18.32	■□□□□ 0.52
ATRX-215	ENST00000624193	MINDY4B	A8MYZ0	360 aa		18.32	■□□□□ 0.52
ATRX-215	ENST00000624193	ADCY6	O43306	1168 aa		18.32	■□□□□ 0.52
ATRX-215	ENST00000624193	SMARCA5	O60264	1052 aa	Predicted RBP	18.32	■□□□□ 0.52
ATRX-215	ENST00000624193	ZBED4	O75132	1171 aa		18.32	■□□□□ 0.52
ATRX-215	ENST00000624193	ACVR2B	Q13705	512 aa		18.32	■□□□□ 0.52
ATRX-215	ENST00000624193	MFSD5	Q6N075	450 aa		18.32	■□□□□ 0.52
ATRX-215	ENST00000624193	USP38	Q8NB14	1042 aa		18.32	■□□□□ 0.52
ATRX-215	ENST00000624193	TIFA	Q96CG3	184 aa		18.32	■□□□□ 0.52
ATRX-215	ENST00000624193	LRRCC1	Q9C099	1032 aa		18.32	■□□□□ 0.52
ATRX-215	ENST00000624193	ZNF576	Q9H609	170 aa		18.32	■□□□□ 0.52
ATRX-215	ENST00000624193	CLIP2	Q9UDT6	1046 aa		18.32	■□□□□ 0.52
ATRX-215	ENST00000624193	CDH23	Q9H251	3354 aa		18.32	■□□□□ 0.52
ATRX-215	ENST00000624193	ELP1	O95163	1332 aa		18.31	■□□□□ 0.52
ATRX-215	ENST00000624193	ASGR1	P07306	291 aa		18.31	■□□□□ 0.52
ATRX-215	ENST00000624193	CCDC144B	Q3MJ40	725 aa		18.31	■□□□□ 0.52
ATRX-215	ENST00000624193	ANKRD35	Q8N283	1001 aa		18.31	■□□□□ 0.52
ATRX-215	ENST00000624193	PCSK9	Q8NBP7	692 aa	Known RBP	18.31	■□□□□ 0.52
ATRX-215	ENST00000624193	SYMPK	Q92797	1274 aa	Known RBP	18.31	■□□□□ 0.52
ATRX-215	ENST00000624193	VTI1A	Q96AJ9	217 aa		18.31	■□□□□ 0.52
ATRX-215	ENST00000624193	FGD4	Q96M96	766 aa		18.31	■□□□□ 0.52
ATRX-215	ENST00000624193	SPC25	Q9HBM1	224 aa		18.31	■□□□□ 0.52
ATRX-215	ENST00000624193	IGKV6D-41	A0A0C4DH26	115 aa		18.3	■□□□□ 0.52
ATRX-215	ENST00000624193	CDK7	P50613	346 aa		18.3	■□□□□ 0.52
ATRX-215	ENST00000624193	PPIG	Q13427	754 aa	Known RBP eCLIP	18.3	■□□□□ 0.52
ATRX-215	ENST00000624193	GIMAP6	Q6P9H5	292 aa		18.3	■□□□□ 0.52
ATRX-215	ENST00000624193	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	18.3	■□□□□ 0.52
ATRX-215	ENST00000624193	ARMCX2	Q7L311	632 aa		18.3	■□□□□ 0.52
ATRX-215	ENST00000624193	UPF3A	Q9H1J1	476 aa	Known RBP	18.3	■□□□□ 0.52
ATRX-215	ENST00000624193	ABHD16B	Q9H3Z7	469 aa		18.3	■□□□□ 0.52
ATRX-215	ENST00000624193	CHMP4B	Q9H444	224 aa	Known RBP	18.3	■□□□□ 0.52
ATRX-215	ENST00000624193	SLC38A10	Q9HBR0	1119 aa		18.3	■□□□□ 0.52
ATRX-215	ENST00000624193	PRDM6	Q9NQX0	595 aa		18.3	■□□□□ 0.52
ATRX-215	ENST00000624193	ECHDC1	Q9NTX5	307 aa		18.3	■□□□□ 0.52
ATRX-215	ENST00000624193		A0A0U1RQG5	324 aa	Predicted RBP	18.29	■□□□□ 0.52
ATRX-215	ENST00000624193	PRDM1	O75626	825 aa		18.29	■□□□□ 0.52
ATRX-215	ENST00000624193	CSF2RA	P15509	400 aa		18.29	■□□□□ 0.52
ATRX-215	ENST00000624193	TDO2	P48775	406 aa		18.29	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms