RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 IDEP14735 1019 aa15.81■□□□□ 0.12
LDB3-209ENST00000623056 XBP1P17861 261 aa15.81■□□□□ 0.12
LDB3-209ENST00000623056 INPP5BP32019 993 aa15.81■□□□□ 0.12
LDB3-209ENST00000623056 IQCEQ6IPM2 695 aa15.81■□□□□ 0.12
LDB3-209ENST00000623056 POTEDQ86YR6 584 aa15.81■□□□□ 0.12
LDB3-209ENST00000623056 AMOTL1Q8IY63 956 aa15.81■□□□□ 0.12
LDB3-209ENST00000623056 SH3GL2Q99962 352 aa15.81■□□□□ 0.12
LDB3-209ENST00000623056 PLA2G12BQ9BX93 195 aa15.81■□□□□ 0.12
LDB3-209ENST00000623056 GDAQ9Y2T3 454 aa15.81■□□□□ 0.12
LDB3-209ENST00000623056 H7C1D1 291 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 PRDM1O75626 825 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 PCCAP05165 728 aaPredicted RBP15.8■□□□□ 0.12
LDB3-209ENST00000623056 PRCPP42785 496 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 RCAN1P53805 252 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 PKN1Q16512 942 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 MEA1Q16626 185 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 TTC19Q6DKK2 380 aaPredicted RBP15.8■□□□□ 0.12
LDB3-209ENST00000623056 CCDC70Q6NSX1 233 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 TMTC2Q8N394 836 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 ZNF507Q8TCN5 953 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 JADE2Q9NQC1 790 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 MYH13Q9UKX3 1938 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 hCG_1642624A0A1W2PR95 340 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 TRIM49BA6NDI0 452 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 PES1O00541 588 aaKnown RBP15.8■□□□□ 0.12
LDB3-209ENST00000623056 PRKAB2O43741 272 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 ARID4AP29374 1257 aaPredicted RBP15.8■□□□□ 0.12
LDB3-209ENST00000623056 CYLC1P35663 651 aaPredicted RBP15.8■□□□□ 0.12
LDB3-209ENST00000623056 MNAT1P51948 309 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 GSCP56915 257 aaPredicted RBP15.8■□□□□ 0.12
LDB3-209ENST00000623056 ATP2C1P98194 919 aaPredicted RBP15.8■□□□□ 0.12
LDB3-209ENST00000623056 PTGDRQ13258 359 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 EZH2Q15910 746 aaKnown RBP15.8■□□□□ 0.12
LDB3-209ENST00000623056 TTC38Q5R3I4 469 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 ANKRD18AQ8IVF6 992 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 MAGEB6Q8N7X4 407 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 VGLL2Q8N8G2 317 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 HDAC7Q8WUI4 952 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 SAMM50Q9Y512 469 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 DUSP10Q9Y6W6 482 aa15.8■□□□□ 0.12
LDB3-209ENST00000623056 RPN1P04843 607 aaKnown RBP15.79■□□□□ 0.12
LDB3-209ENST00000623056 MMGT1Q8N4V1 131 aa15.79■□□□□ 0.12
LDB3-209ENST00000623056 PURBQ96QR8 312 aaKnown RBP15.79■□□□□ 0.12
LDB3-209ENST00000623056 CNNM1Q9NRU3 951 aa15.79■□□□□ 0.12
LDB3-209ENST00000623056 PDS5AQ29RF7 1337 aaKnown RBP15.79■□□□□ 0.12
LDB3-209ENST00000623056 OPA1O60313 960 aa15.79■□□□□ 0.12
LDB3-209ENST00000623056 ITGA6P23229 1130 aa15.79■□□□□ 0.12
LDB3-209ENST00000623056 TDO2P48775 406 aa15.79■□□□□ 0.12
LDB3-209ENST00000623056 TOM1L2Q6ZVM7 507 aa15.79■□□□□ 0.12
LDB3-209ENST00000623056 CNPY4Q8N129 248 aa15.79■□□□□ 0.12
LDB3-209ENST00000623056 SYNE4Q8N205 404 aa15.79■□□□□ 0.12
LDB3-209ENST00000623056 GREM2Q9H772 168 aa15.79■□□□□ 0.12
LDB3-209ENST00000623056 RMND1Q9NWS8 449 aa15.79■□□□□ 0.12
LDB3-209ENST00000623056 DMGDHQ9UI17 866 aaKnown RBP15.79■□□□□ 0.12
LDB3-209ENST00000623056 DISP2A7MBM2 1401 aa15.78■□□□□ 0.12
LDB3-209ENST00000623056 MACROD2A1Z1Q3 448 aa15.78■□□□□ 0.12
LDB3-209ENST00000623056 USP8P40818 1118 aa15.78■□□□□ 0.12
LDB3-209ENST00000623056 CREG2Q8IUH2 290 aa15.78■□□□□ 0.12
LDB3-209ENST00000623056 TNFRSF25Q93038 417 aa15.78■□□□□ 0.12
LDB3-209ENST00000623056 MTA3Q9BTC8 594 aa15.78■□□□□ 0.12
LDB3-209ENST00000623056 LRRC1Q9BTT6 524 aa15.78■□□□□ 0.12
LDB3-209ENST00000623056 NHEJ1Q9H9Q4 299 aaPredicted RBP15.78■□□□□ 0.12
LDB3-209ENST00000623056 AGPAT5Q9NUQ2 364 aa15.78■□□□□ 0.12
LDB3-209ENST00000623056 UQCRFS1P1P0C7P4 283 aa15.78■□□□□ 0.12
LDB3-209ENST00000623056 EPB41P11171 864 aaKnown RBP15.78■□□□□ 0.12
LDB3-209ENST00000623056 EEF1GP26641 437 aaKnown RBP15.78■□□□□ 0.12
LDB3-209ENST00000623056 SKOR1P84550 965 aa15.78■□□□□ 0.12
LDB3-209ENST00000623056 TRIM28Q13263 835 aaKnown RBP15.78■□□□□ 0.12
LDB3-209ENST00000623056 TTMPQ5BVD1 217 aa15.78■□□□□ 0.12
LDB3-209ENST00000623056 PAXIP1Q6ZW49 1069 aaPredicted RBP15.78■□□□□ 0.12
LDB3-209ENST00000623056 ADSSL1Q8N142 457 aa15.78■□□□□ 0.12
LDB3-209ENST00000623056 FNBP4Q8N3X1 1017 aaPredicted RBP15.78■□□□□ 0.12
LDB3-209ENST00000623056 ZBTB38Q8NAP3 1195 aaPredicted RBP15.78■□□□□ 0.12
LDB3-209ENST00000623056 UBAC1Q9BSL1 405 aa15.78■□□□□ 0.12
LDB3-209ENST00000623056 IPO7O95373 1038 aaKnown RBP15.77■□□□□ 0.12
LDB3-209ENST00000623056 PMS1P54277 932 aaKnown RBP15.77■□□□□ 0.12
LDB3-209ENST00000623056 CYP27A1Q02318 531 aa15.77■□□□□ 0.12
LDB3-209ENST00000623056 PPARAQ07869 468 aa15.77■□□□□ 0.12
LDB3-209ENST00000623056 PRPF38AQ8NAV1 312 aaKnown RBP15.77■□□□□ 0.12
LDB3-209ENST00000623056 TSEN2Q8NCE0 465 aaKnown RBP15.77■□□□□ 0.12
LDB3-209ENST00000623056 RUBCNQ92622 972 aa15.77■□□□□ 0.12
LDB3-209ENST00000623056 SECISBP2LQ93073 1101 aaKnown RBP15.77■□□□□ 0.12
LDB3-209ENST00000623056 ARL8AQ96BM9 186 aa15.77■□□□□ 0.12
LDB3-209ENST00000623056 TTYH3Q9C0H2 523 aa15.77■□□□□ 0.12
LDB3-209ENST00000623056 SNX12Q9UMY4 172 aa15.77■□□□□ 0.12
LDB3-209ENST00000623056 ZNF330Q9Y3S2 320 aaPredicted RBP15.77■□□□□ 0.12
LDB3-209ENST00000623056 KCPQ6ZWJ8 1503 aa15.77■□□□□ 0.11
LDB3-209ENST00000623056 PDE8BO95263 885 aa15.77■□□□□ 0.11
LDB3-209ENST00000623056 MRPS25P82663 173 aaKnown RBP15.77■□□□□ 0.11
LDB3-209ENST00000623056 FUT2Q10981 343 aa15.77■□□□□ 0.11
LDB3-209ENST00000623056 IL17AQ16552 155 aa15.77■□□□□ 0.11
LDB3-209ENST00000623056 TEX2Q8IWB9 1127 aa15.77■□□□□ 0.11
LDB3-209ENST00000623056 CCDC170Q8IYT3 715 aa15.77■□□□□ 0.11
LDB3-209ENST00000623056 LCORLQ8N3X6 602 aa15.77■□□□□ 0.11
LDB3-209ENST00000623056 PYM1Q9BRP8 204 aaKnown RBP15.77■□□□□ 0.11
LDB3-209ENST00000623056 NACAP1Q9BZK3 213 aa15.77■□□□□ 0.11
LDB3-209ENST00000623056 ZNHIT6Q9NWK9 470 aaKnown RBP15.77■□□□□ 0.11
LDB3-209ENST00000623056 SLC4A4Q9Y6R1 1079 aa15.77■□□□□ 0.11
LDB3-209ENST00000623056 V9GY48 417 aaPredicted RBP15.77■□□□□ 0.11
LDB3-209ENST00000623056 UBR2Q8IWV8 1755 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms