RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 GH2P01242 217 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 CYP2D6P10635 497 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 CYP2B6P20813 491 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 JAG1P78504 1218 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 IRF5Q13568 498 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 UBE3CQ15386 1083 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 CERKLQ49MI3 558 aaPredicted RBP7.04□□□□□ -1.28
LINC00963-215ENST00000622972 SH3D19Q5HYK7 790 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 WDR78Q5VTH9 848 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 USP17L2Q6R6M4 530 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 NYAP1Q6ZVC0 841 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 GPRC5AQ8NFJ5 357 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 SDR42E1Q8WUS8 393 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 SHISA4Q96DD7 197 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 P2RX7Q99572 595 aaKnown RBP7.04□□□□□ -1.28
LINC00963-215ENST00000622972 NUDT12Q9BQG2 462 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 CRNKL1Q9BZJ0 848 aaKnown RBP7.04□□□□□ -1.28
LINC00963-215ENST00000622972 GINM1Q9NU53 330 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 SERPINB13Q9UIV8 391 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 NR2E3Q9Y5X4 410 aa7.04□□□□□ -1.28
LINC00963-215ENST00000622972 HMGCRP04035 888 aa7.03□□□□□ -1.28
LINC00963-215ENST00000622972 USP14P54578 494 aa7.03□□□□□ -1.28
LINC00963-215ENST00000622972 HERVK_113P62684 666 aa7.03□□□□□ -1.28
LINC00963-215ENST00000622972 ABCB5Q2M3G0 1257 aa7.03□□□□□ -1.28
LINC00963-215ENST00000622972 AMOTL1Q8IY63 956 aa7.03□□□□□ -1.28
LINC00963-215ENST00000622972 GTF3C2Q8WUA4 911 aaPredicted RBP7.03□□□□□ -1.28
LINC00963-215ENST00000622972 APPBP2Q92624 585 aa7.03□□□□□ -1.28
LINC00963-215ENST00000622972 STRBPQ96SI9 672 aaKnown RBP7.03□□□□□ -1.28
LINC00963-215ENST00000622972 FSD1Q9BTV5 496 aa7.03□□□□□ -1.28
LINC00963-215ENST00000622972 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.03□□□□□ -1.282e-6■■□□□ 13.3
LINC00963-215ENST00000622972 HMX1Q9NP08 348 aaPredicted RBP7.03□□□□□ -1.28
LINC00963-215ENST00000622972 MCM9Q9NXL9 1143 aa7.03□□□□□ -1.28
LINC00963-215ENST00000622972 HCSTQ9UBK5 93 aa7.03□□□□□ -1.28
LINC00963-215ENST00000622972 TAF6LQ9Y6J9 622 aa7.03□□□□□ -1.28
LINC00963-215ENST00000622972 DOCK3Q8IZD9 2030 aa7.03□□□□□ -1.28
LINC00963-215ENST00000622972 GSG1L2A8MUP6 293 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 USP17L15C9J2P7 530 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 USP17L13C9JLJ4 530 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 USP17L11C9JVI0 530 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 USP17L18D6R9N7 530 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 USP17L22D6RA61 530 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 USP17L17D6RBQ6 530 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 USP17L19D6RCP7 530 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 USP17L20D6RJB6 530 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 ERC2O15083 957 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 GPAA1O43292 621 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 ACTN4O43707 911 aaKnown RBP7.02□□□□□ -1.29
LINC00963-215ENST00000622972 PEX10O60683 326 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 CHMLP26374 656 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 MAPK4P31152 587 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 HOXA7P31268 230 aaPredicted RBP7.02□□□□□ -1.29
LINC00963-215ENST00000622972 USP46P62068 366 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 ERVK-9P63128 1117 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 ERVK-24P63145 666 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 CCNA1P78396 465 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 USP17L24Q0WX57 530 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 MMRN1Q13201 1228 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 BMP2KLQ5H9B9 411 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 TMED8Q6PL24 325 aaPredicted RBP7.02□□□□□ -1.29
LINC00963-215ENST00000622972 NECAB2Q7Z6G3 386 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 SPIRE2Q8WWL2 714 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 SOCS4Q8WXH5 440 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 EVI5LQ96CN4 794 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 GPATCH3Q96I76 525 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.02□□□□□ -1.29
LINC00963-215ENST00000622972 MORF4L1Q9UBU8 362 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 IVNS1ABPQ9Y6Y0 642 aa7.02□□□□□ -1.29
LINC00963-215ENST00000622972 RPTORQ8N122 1335 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 RAD21O60216 631 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 ZKSCAN1P17029 563 aaPredicted RBP7.01□□□□□ -1.29
LINC00963-215ENST00000622972 CAPN2P17655 700 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 RGS2P41220 211 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 PLCD1P51178 756 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 ATP2B2Q01814 1243 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 PTH1RQ03431 593 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 FUT2Q10981 343 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 TRIM32Q13049 653 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 TATDN1Q6P1N9 297 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 PLEKHH3Q7Z736 793 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 METTL16Q86W50 562 aaKnown RBP7.01□□□□□ -1.29
LINC00963-215ENST00000622972 TRMT44Q8IYL2 757 aaKnown RBP7.01□□□□□ -1.29
LINC00963-215ENST00000622972 SLC44A5Q8NCS7 719 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 RILPL2Q969X0 211 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 PAWRQ96IZ0 340 aaKnown RBP7.01□□□□□ -1.29
LINC00963-215ENST00000622972 TANGO6Q9C0B7 1094 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 EHD4Q9H223 541 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 TXNRD2Q9NNW7 524 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 DCP1AQ9NPI6 582 aaPredicted RBP7.01□□□□□ -1.29
LINC00963-215ENST00000622972 RBPJLQ9UBG7 517 aa7.01□□□□□ -1.29
LINC00963-215ENST00000622972 ROBO3Q96MS0 1386 aa7□□□□□ -1.29
LINC00963-215ENST00000622972 COL11A1P12107 1806 aaPredicted RBP7□□□□□ -1.29
LINC00963-215ENST00000622972 CNGA1P29973 690 aa7□□□□□ -1.29
LINC00963-215ENST00000622972 SHMT1P34896 483 aa7□□□□□ -1.29
LINC00963-215ENST00000622972 GABPAQ06546 454 aa7□□□□□ -1.29
LINC00963-215ENST00000622972 PLS1Q14651 629 aa7□□□□□ -1.29
LINC00963-215ENST00000622972 SEPT2Q15019 361 aa7□□□□□ -1.29
LINC00963-215ENST00000622972 TMEM132AQ24JP5 1023 aa7□□□□□ -1.29
LINC00963-215ENST00000622972 Q3C1V9 767 aa7□□□□□ -1.29
LINC00963-215ENST00000622972 MFSD14CQ5VZR4 134 aa7□□□□□ -1.29
LINC00963-215ENST00000622972 ZSCAN25Q6NSZ9 544 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms