RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 DLGAP5Q15398 846 aa21.12■□□□□ 0.97
PCDHB2-202ENST00000622947 CDAN1Q8IWY9 1227 aa21.12■□□□□ 0.97
PCDHB2-202ENST00000622947 BLIDQ8IZY5 108 aa21.12■□□□□ 0.97
PCDHB2-202ENST00000622947 UPF1Q92900 1129 aaKnown RBP eCLIP21.12■□□□□ 0.97
PCDHB2-202ENST00000622947 PCDHA4Q9UN74 947 aa21.12■□□□□ 0.97
PCDHB2-202ENST00000622947 CNTNAP1P78357 1384 aa21.12■□□□□ 0.97
PCDHB2-202ENST00000622947 TRIM75PA6NK02 468 aa21.12■□□□□ 0.97
PCDHB2-202ENST00000622947 CTAGE5O15320 804 aa21.12■□□□□ 0.97
PCDHB2-202ENST00000622947 GDF11O95390 407 aa21.12■□□□□ 0.97
PCDHB2-202ENST00000622947 GTF2F1P35269 517 aaKnown RBP eCLIP21.12■□□□□ 0.97
PCDHB2-202ENST00000622947 ATP2B2Q01814 1243 aa21.12■□□□□ 0.97
PCDHB2-202ENST00000622947 EEF2P13639 858 aaKnown RBP21.11■□□□□ 0.97
PCDHB2-202ENST00000622947 SMARCA1P28370 1054 aa21.11■□□□□ 0.97
PCDHB2-202ENST00000622947 CBX1P83916 185 aa21.11■□□□□ 0.97
PCDHB2-202ENST00000622947 ZNF543Q08ER8 600 aa21.11■□□□□ 0.97
PCDHB2-202ENST00000622947 SEPT2Q15019 361 aa21.11■□□□□ 0.97
PCDHB2-202ENST00000622947 ZNF174Q15697 407 aa21.11■□□□□ 0.97
PCDHB2-202ENST00000622947 TAF3Q5VWG9 929 aa21.11■□□□□ 0.97
PCDHB2-202ENST00000622947 TTBK2Q6IQ55 1244 aa21.11■□□□□ 0.97
PCDHB2-202ENST00000622947 ZNF710Q8N1W2 664 aa21.11■□□□□ 0.97
PCDHB2-202ENST00000622947 OGFOD1Q8N543 542 aa21.11■□□□□ 0.97
PCDHB2-202ENST00000622947 CSRNP1Q96S65 589 aa21.11■□□□□ 0.97
PCDHB2-202ENST00000622947 GPCPD1Q9NPB8 672 aa21.11■□□□□ 0.97
PCDHB2-202ENST00000622947 COL2A1P02458 1487 aaPredicted RBP21.11■□□□□ 0.97
PCDHB2-202ENST00000622947 SPDYE2Q495Y8 402 aa21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 USP49Q70CQ1 688 aa21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 AGBL3Q8NEM8 1001 aa21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 HDAC9Q9UKV0 1011 aa21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 BCS1LQ9Y276 419 aa21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 SRPRBQ9Y5M8 271 aaKnown RBP21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 AP5Z1O43299 807 aa21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 CALML3P27482 149 aa21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 SYKP43405 635 aa21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 ASPRV1Q53RT3 343 aa21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 TTC38Q5R3I4 469 aa21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 SDF4Q9BRK5 362 aa21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 DNAJC25Q9H1X3 360 aa21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 PCDHA6Q9UN73 950 aa21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 PCDHA8Q9Y5H6 950 aa21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 CD2APQ9Y5K6 639 aa21.1■□□□□ 0.97
PCDHB2-202ENST00000622947 RRP36Q96EU6 259 aaKnown RBP21.09■□□□□ 0.97
PCDHB2-202ENST00000622947 ZBED3Q96IU2 234 aaPredicted RBP21.09■□□□□ 0.97
PCDHB2-202ENST00000622947 LUZP1Q86V48 1076 aa21.09■□□□□ 0.97
PCDHB2-202ENST00000622947 DAGLBQ8NCG7 672 aa21.09■□□□□ 0.97
PCDHB2-202ENST00000622947 NLGN2Q8NFZ4 835 aa21.09■□□□□ 0.97
PCDHB2-202ENST00000622947 FAM200AQ8TCP9 573 aa21.09■□□□□ 0.97
PCDHB2-202ENST00000622947 MKL1Q969V6 931 aa21.09■□□□□ 0.97
PCDHB2-202ENST00000622947 ZMYND12Q9H0C1 365 aa21.09■□□□□ 0.97
PCDHB2-202ENST00000622947 CBX8Q9HC52 389 aa21.09■□□□□ 0.97
PCDHB2-202ENST00000622947 USP25Q9UHP3 1055 aa21.09■□□□□ 0.97
PCDHB2-202ENST00000622947 RASSF7Q02833 373 aa21.08■□□□□ 0.97
PCDHB2-202ENST00000622947 NBPF9Q3BBW0 867 aa21.08■□□□□ 0.97
PCDHB2-202ENST00000622947 CIAPIN1Q6FI81 312 aa21.08■□□□□ 0.97
PCDHB2-202ENST00000622947 C11orf57Q6ZUT1 292 aaPredicted RBP21.08■□□□□ 0.97
PCDHB2-202ENST00000622947 KCTD1Q719H9 257 aa21.08■□□□□ 0.97
PCDHB2-202ENST00000622947 MTMR14Q8NCE2 650 aa21.08■□□□□ 0.97
PCDHB2-202ENST00000622947 CSRNP2Q9H175 543 aa21.08■□□□□ 0.97
PCDHB2-202ENST00000622947 KCNH3Q9ULD8 1083 aa21.08■□□□□ 0.97
PCDHB2-202ENST00000622947 EGFRP00533 1210 aa21.08■□□□□ 0.96
PCDHB2-202ENST00000622947 SLC16A2P36021 539 aa21.08■□□□□ 0.96
PCDHB2-202ENST00000622947 LONRF3Q496Y0 759 aa21.08■□□□□ 0.96
PCDHB2-202ENST00000622947 TRIM34Q9BYJ4 488 aa21.08■□□□□ 0.96
PCDHB2-202ENST00000622947 KANSL2Q9H9L4 492 aa21.08■□□□□ 0.96
PCDHB2-202ENST00000622947 CEP131Q9UPN4 1083 aa21.08■□□□□ 0.96
PCDHB2-202ENST00000622947 SCAF8Q9UPN6 1271 aaKnown RBP21.08■□□□□ 0.96
PCDHB2-202ENST00000622947 MORC2Q9Y6X9 1032 aaPredicted RBP21.08■□□□□ 0.96
PCDHB2-202ENST00000622947 PTGDRQ13258 359 aa21.07■□□□□ 0.96
PCDHB2-202ENST00000622947 ABCB5Q2M3G0 1257 aa21.07■□□□□ 0.96
PCDHB2-202ENST00000622947 ADGRF4Q8IZF3 695 aa21.07■□□□□ 0.96
PCDHB2-202ENST00000622947 FAM151AQ8WW52 585 aa21.07■□□□□ 0.96
PCDHB2-202ENST00000622947 JMJD4Q9H9V9 463 aa21.07■□□□□ 0.96
PCDHB2-202ENST00000622947 NYAP2Q9P242 653 aa21.07■□□□□ 0.96
PCDHB2-202ENST00000622947 KIAA1468Q9P260 1216 aa21.07■□□□□ 0.96
PCDHB2-202ENST00000622947 WNT10BO00744 389 aa21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 PPP1R11O60927 126 aaPredicted RBP21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 NAPAP54920 295 aa21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 TMEM179Q6ZVK1 233 aa21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 ZNF579Q8NAF0 562 aaKnown RBP21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 CCDC148Q8NFR7 591 aa21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 JDP2Q8WYK2 163 aa21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 TIGD1Q96MW7 591 aa21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 TMEM39BQ9GZU3 492 aa21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 VEZTQ9HBM0 779 aa21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 TMOD2Q9NZR1 351 aa21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 GH2P01242 217 aa21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 COA7Q96BR5 231 aa21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 TMEM51Q9NW97 253 aa21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 SEC63Q9UGP8 760 aaKnown RBP21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 ARFGEF1Q9Y6D6 1849 aa21.06■□□□□ 0.96
PCDHB2-202ENST00000622947 MCM7P33993 719 aa21.05■□□□□ 0.96
PCDHB2-202ENST00000622947 TRAPPC10P48553 1259 aa21.05■□□□□ 0.96
PCDHB2-202ENST00000622947 ATP2C1P98194 919 aaPredicted RBP21.05■□□□□ 0.96
PCDHB2-202ENST00000622947 ICA1Q05084 483 aa21.05■□□□□ 0.96
PCDHB2-202ENST00000622947 IL17AQ16552 155 aa21.05■□□□□ 0.96
PCDHB2-202ENST00000622947 PGAP2Q9UHJ9 254 aa21.05■□□□□ 0.96
PCDHB2-202ENST00000622947 SMCO2A6NFE2 343 aa21.05■□□□□ 0.96
PCDHB2-202ENST00000622947 ZNF165P49910 485 aa21.05■□□□□ 0.96
PCDHB2-202ENST00000622947 DNTTIP2Q5QJE6 756 aaKnown RBP21.05■□□□□ 0.96
PCDHB2-202ENST00000622947 GALNT17Q6IS24 598 aa21.05■□□□□ 0.96
PCDHB2-202ENST00000622947 C4orf32Q8N8J7 132 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms