RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 BMP3P12645 472 aa18.95■□□□□ 0.62
DDB2-216ENST00000622878 CYBAP13498 195 aa18.95■□□□□ 0.62
DDB2-216ENST00000622878 COPB2P35606 906 aa18.95■□□□□ 0.62
DDB2-216ENST00000622878 IRX6P78412 446 aaPredicted RBP18.95■□□□□ 0.62
DDB2-216ENST00000622878 MAML3Q96JK9 1138 aa18.95■□□□□ 0.62
DDB2-216ENST00000622878 TEX13BQ9BXU2 312 aa18.95■□□□□ 0.62
DDB2-216ENST00000622878 SLC38A10Q9HBR0 1119 aa18.95■□□□□ 0.62
DDB2-216ENST00000622878 SLC5A4Q9NY91 659 aa18.95■□□□□ 0.62
DDB2-216ENST00000622878 RIPK3Q9Y572 518 aa18.95■□□□□ 0.62
DDB2-216ENST00000622878 RANBP6O60518 1105 aaKnown RBP18.94■□□□□ 0.62
DDB2-216ENST00000622878 ZNF792Q3KQV3 632 aa18.94■□□□□ 0.62
DDB2-216ENST00000622878 HABP4Q5JVS0 413 aaKnown RBP18.94■□□□□ 0.62
DDB2-216ENST00000622878 PPP4R3BQ5MIZ7 849 aa18.94■□□□□ 0.62
DDB2-216ENST00000622878 MMP19Q99542 508 aa18.94■□□□□ 0.62
DDB2-216ENST00000622878 DDX20Q9UHI6 824 aaKnown RBP18.94■□□□□ 0.62
DDB2-216ENST00000622878 STX8Q9UNK0 236 aa18.94■□□□□ 0.62
DDB2-216ENST00000622878 COLQQ9Y215 455 aaPredicted RBP18.94■□□□□ 0.62
DDB2-216ENST00000622878 LAMA3Q16787 3333 aa18.94■□□□□ 0.62
DDB2-216ENST00000622878 PFASO15067 1338 aa18.94■□□□□ 0.62
DDB2-216ENST00000622878 LAMA4Q16363 1823 aa18.93■□□□□ 0.62
DDB2-216ENST00000622878 SNRNP48Q6IEG0 339 aaKnown RBP18.93■□□□□ 0.62
DDB2-216ENST00000622878 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.93■□□□□ 0.62
DDB2-216ENST00000622878 KIFC2Q96AC6 838 aa18.93■□□□□ 0.62
DDB2-216ENST00000622878 C11orf49Q9H6J7 331 aa18.93■□□□□ 0.62
DDB2-216ENST00000622878 TCP11L1Q9NUJ3 509 aa18.93■□□□□ 0.62
DDB2-216ENST00000622878 DIS3Q9Y2L1 958 aaKnown RBP18.93■□□□□ 0.62
DDB2-216ENST00000622878 NR2E3Q9Y5X4 410 aa18.93■□□□□ 0.62
DDB2-216ENST00000622878 EVI5O60447 810 aa18.92■□□□□ 0.62
DDB2-216ENST00000622878 MSCO60682 206 aa18.92■□□□□ 0.62
DDB2-216ENST00000622878 PLA2G6O60733 806 aa18.92■□□□□ 0.62
DDB2-216ENST00000622878 ZBED4O75132 1171 aa18.92■□□□□ 0.62
DDB2-216ENST00000622878 PGK2P07205 417 aa18.92■□□□□ 0.62
DDB2-216ENST00000622878 MCCP23508 829 aa18.92■□□□□ 0.62
DDB2-216ENST00000622878 OAZ1P54368 228 aa18.92■□□□□ 0.62
DDB2-216ENST00000622878 MFAP1P55081 439 aaKnown RBP18.92■□□□□ 0.62
DDB2-216ENST00000622878 HAND2P61296 217 aa18.92■□□□□ 0.62
DDB2-216ENST00000622878 KCTD2Q14681 263 aa18.92■□□□□ 0.62
DDB2-216ENST00000622878 CWC27Q6UX04 472 aaKnown RBP18.92■□□□□ 0.62
DDB2-216ENST00000622878 PRO3102Q9H379 93 aa18.92■□□□□ 0.62
DDB2-216ENST00000622878 DNAJC25-GNG10A0A024R161 153 aa18.91■□□□□ 0.62
DDB2-216ENST00000622878 TMEM232C9JQI7 657 aa18.91■□□□□ 0.62
DDB2-216ENST00000622878 HIP1O00291 1037 aa18.91■□□□□ 0.62
DDB2-216ENST00000622878 PCP11498 1178 aaKnown RBP18.91■□□□□ 0.62
DDB2-216ENST00000622878 GSPT1P15170 499 aaKnown RBP18.91■□□□□ 0.62
DDB2-216ENST00000622878 CNGA1P29973 690 aa18.91■□□□□ 0.62
DDB2-216ENST00000622878 STAT2P52630 851 aa18.91■□□□□ 0.62
DDB2-216ENST00000622878 PRAMEF19Q5SWL8 479 aa18.91■□□□□ 0.62
DDB2-216ENST00000622878 RASGRP2Q7LDG7 609 aa18.91■□□□□ 0.62
DDB2-216ENST00000622878 TBC1D10CQ8IV04 446 aa18.91■□□□□ 0.62
DDB2-216ENST00000622878 STAG1Q8WVM7 1258 aa18.91■□□□□ 0.62
DDB2-216ENST00000622878 RAVER2Q9HCJ3 691 aaKnown RBP18.91■□□□□ 0.62
DDB2-216ENST00000622878 DIAPH3Q9NSV4 1193 aa18.91■□□□□ 0.62
DDB2-216ENST00000622878 SMCHD1A6NHR9 2005 aa18.91■□□□□ 0.62
DDB2-216ENST00000622878 SEPT4O43236 478 aa18.9■□□□□ 0.62
DDB2-216ENST00000622878 FDX1P10109 184 aa18.9■□□□□ 0.62
DDB2-216ENST00000622878 SLC1A4P43007 532 aa18.9■□□□□ 0.62
DDB2-216ENST00000622878 AKNAD1Q5T1N1 836 aa18.9■□□□□ 0.62
DDB2-216ENST00000622878 RCSD1Q6JBY9 416 aa18.9■□□□□ 0.62
DDB2-216ENST00000622878 FAM160B2Q86V87 743 aa18.9■□□□□ 0.62
DDB2-216ENST00000622878 CPXCR1Q8N123 301 aa18.9■□□□□ 0.62
DDB2-216ENST00000622878 CHURC1Q8WUH1 139 aa18.9■□□□□ 0.62
DDB2-216ENST00000622878 TINF2Q9BSI4 451 aa18.9■□□□□ 0.62
DDB2-216ENST00000622878 ZNF536O15090 1300 aa18.9■□□□□ 0.62
DDB2-216ENST00000622878 RRP12Q5JTH9 1297 aaKnown RBP18.89■□□□□ 0.61
DDB2-216ENST00000622878 TTC22Q5TAA0 569 aa18.89■□□□□ 0.61
DDB2-216ENST00000622878 KCTD1Q719H9 257 aa18.89■□□□□ 0.61
DDB2-216ENST00000622878 TMEM47Q9BQJ4 181 aa18.89■□□□□ 0.61
DDB2-216ENST00000622878 IL25Q9H293 177 aa18.89■□□□□ 0.61
DDB2-216ENST00000622878 NRBP1Q9UHY1 535 aa18.89■□□□□ 0.61
DDB2-216ENST00000622878 CHRDL2Q6WN34 429 aa18.88■□□□□ 0.61
DDB2-216ENST00000622878 MFSD6Q6ZSS7 791 aa18.88■□□□□ 0.61
DDB2-216ENST00000622878 CHST13Q8NET6 341 aa18.88■□□□□ 0.61
DDB2-216ENST00000622878 CHMP4CQ96CF2 233 aa18.88■□□□□ 0.61
DDB2-216ENST00000622878 TOMM22Q9NS69 142 aa18.88■□□□□ 0.61
DDB2-216ENST00000622878 ZNF213O14771 459 aa18.87■□□□□ 0.61
DDB2-216ENST00000622878 TOP1P11387 765 aaKnown RBP18.87■□□□□ 0.61
DDB2-216ENST00000622878 NEDD4P46934 1319 aa18.87■□□□□ 0.61
DDB2-216ENST00000622878 MAMDC4Q6UXC1 1216 aa18.87■□□□□ 0.61
DDB2-216ENST00000622878 MSL3Q8N5Y2 521 aaKnown RBP18.87■□□□□ 0.61
DDB2-216ENST00000622878 DCAF4Q8WV16 495 aa18.87■□□□□ 0.61
DDB2-216ENST00000622878 FGD4Q96M96 766 aa18.87■□□□□ 0.61
DDB2-216ENST00000622878 TTC14Q96N46 770 aa18.87■□□□□ 0.61
DDB2-216ENST00000622878 DSCC1Q9BVC3 393 aa18.87■□□□□ 0.61
DDB2-216ENST00000622878 PRR12Q9ULL5 1215 aa18.87■□□□□ 0.61
DDB2-216ENST00000622878 CTDP1Q9Y5B0 961 aaPredicted RBP18.87■□□□□ 0.61
DDB2-216ENST00000622878 DNM1LO00429 736 aa18.86■□□□□ 0.61
DDB2-216ENST00000622878 ZNF865P0CJ78 1059 aaPredicted RBP18.86■□□□□ 0.61
DDB2-216ENST00000622878 TAL1P17542 331 aaPredicted RBP18.86■□□□□ 0.61
DDB2-216ENST00000622878 LRRC26Q2I0M4 334 aa18.86■□□□□ 0.61
DDB2-216ENST00000622878 ANO1Q5XXA6 986 aa18.86■□□□□ 0.61
DDB2-216ENST00000622878 BTNL9Q6UXG8 535 aa18.86■□□□□ 0.61
DDB2-216ENST00000622878 ZNF467Q7Z7K2 595 aaPredicted RBP18.86■□□□□ 0.61
DDB2-216ENST00000622878 C7orf61Q8IZ16 206 aa18.86■□□□□ 0.61
DDB2-216ENST00000622878 AGBL1Q96MI9 1066 aa18.86■□□□□ 0.61
DDB2-216ENST00000622878 RNF41Q9H4P4 317 aaPredicted RBP18.86■□□□□ 0.61
DDB2-216ENST00000622878 RBM27Q9P2N5 1060 aaKnown RBP18.86■□□□□ 0.61
DDB2-216ENST00000622878 FBXO40Q9UH90 709 aa18.86■□□□□ 0.61
DDB2-216ENST00000622878 SYNGAP1Q96PV0 1343 aa18.85■□□□□ 0.61
DDB2-216ENST00000622878 MCM3APO60318 1980 aa18.85■□□□□ 0.61
DDB2-216ENST00000622878 SLC4A3P48751 1232 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms