RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 PARP14Q460N5 1801 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 TNKSO95271 1327 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 STRNO43815 780 aa16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 HMGCRP04035 888 aa16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 ZKSCAN1P17029 563 aaPredicted RBP16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 COPB2P35606 906 aa16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 MAP2K5Q13163 448 aa16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 MTFR1Q15390 333 aa16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 MORN1Q5T089 497 aa16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 SNRNP48Q6IEG0 339 aaKnown RBP16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 RASGRP2Q7LDG7 609 aa16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 DPP9Q86TI2 863 aa16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 NCOA7Q8NI08 942 aa16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 TEX13BQ9BXU2 312 aa16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 LSG1Q9H089 658 aaKnown RBP16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 RNF208Q9H0X6 261 aa16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 ZNF214Q9UL59 606 aaPredicted RBP16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 FRMPD2Q68DX3 1309 aaPredicted RBP16.41■□□□□ 0.22
PCDHGC3-208ENST00000622836 KIAA0100Q14667 2235 aaKnown RBP16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 ERICH2A1L162 156 aa16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 E7EWF7 191 aa16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 FDX1P10109 184 aa16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 FCER1AP12319 257 aa16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 XRCC5P13010 732 aaKnown RBP16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 CCL5P13501 91 aa16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 GRB14Q14449 540 aa16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 RIOX2Q8IUF8 465 aa16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 TRMT44Q8IYL2 757 aaKnown RBP16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 TRIB2Q92519 343 aa16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 SLC38A10Q9HBR0 1119 aa16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 RAVER2Q9HCJ3 691 aaKnown RBP16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 GPCPD1Q9NPB8 672 aa16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 SLC5A4Q9NY91 659 aa16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 COL11A1P12107 1806 aaPredicted RBP16.4■□□□□ 0.22
PCDHGC3-208ENST00000622836 POTEFA5A3E0 1075 aa16.39■□□□□ 0.21
PCDHGC3-208ENST00000622836 PDHBP11177 359 aa16.39■□□□□ 0.21
PCDHGC3-208ENST00000622836 ADORA2AP29274 412 aa16.39■□□□□ 0.21
PCDHGC3-208ENST00000622836 KCTD2Q14681 263 aa16.39■□□□□ 0.21
PCDHGC3-208ENST00000622836 SART3Q15020 963 aaKnown RBP16.39■□□□□ 0.21
PCDHGC3-208ENST00000622836 IFIT1BQ5T764 474 aaKnown RBP16.39■□□□□ 0.21
PCDHGC3-208ENST00000622836 ENAHQ8N8S7 591 aaPredicted RBP16.39■□□□□ 0.21
PCDHGC3-208ENST00000622836 PNMA1Q8ND90 353 aa16.39■□□□□ 0.21
PCDHGC3-208ENST00000622836 REPS2Q8NFH8 660 aa16.39■□□□□ 0.21
PCDHGC3-208ENST00000622836 MMP19Q99542 508 aa16.39■□□□□ 0.21
PCDHGC3-208ENST00000622836 PLA2G6O60733 806 aa16.38■□□□□ 0.21
PCDHGC3-208ENST00000622836 SLC16A2P36021 539 aa16.38■□□□□ 0.21
PCDHGC3-208ENST00000622836 OAZ1P54368 228 aa16.38■□□□□ 0.21
PCDHGC3-208ENST00000622836 MLLT1Q03111 559 aaPredicted RBP16.38■□□□□ 0.21
PCDHGC3-208ENST00000622836 RNF20Q5VTR2 975 aa16.38■□□□□ 0.21
PCDHGC3-208ENST00000622836 CCDC174Q6PII3 467 aa16.38■□□□□ 0.21
PCDHGC3-208ENST00000622836 CYB5R4Q7L1T6 521 aa16.38■□□□□ 0.21
PCDHGC3-208ENST00000622836 USP6NLQ92738 828 aa16.38■□□□□ 0.21
PCDHGC3-208ENST00000622836 UNC93B1Q9H1C4 597 aa16.38■□□□□ 0.21
PCDHGC3-208ENST00000622836 PRR12Q9ULL5 1215 aa16.38■□□□□ 0.21
PCDHGC3-208ENST00000622836 TAF6LQ9Y6J9 622 aa16.38■□□□□ 0.21
PCDHGC3-208ENST00000622836 PLXNB2O15031 1838 aa16.38■□□□□ 0.21
PCDHGC3-208ENST00000622836 IFIT3O14879 490 aaKnown RBP16.37■□□□□ 0.21
PCDHGC3-208ENST00000622836 SLC27A2O14975 620 aa16.37■□□□□ 0.21
PCDHGC3-208ENST00000622836 EN2P19622 333 aaPredicted RBP16.37■□□□□ 0.21
PCDHGC3-208ENST00000622836 CCL14Q16627 93 aa16.37■□□□□ 0.21
PCDHGC3-208ENST00000622836 SYDE2Q5VT97 1194 aa16.37■□□□□ 0.21
PCDHGC3-208ENST00000622836 MFSD14CQ5VZR4 134 aa16.37■□□□□ 0.21
PCDHGC3-208ENST00000622836 CREB3L3Q68CJ9 461 aa16.37■□□□□ 0.21
PCDHGC3-208ENST00000622836 TTBK2Q6IQ55 1244 aa16.37■□□□□ 0.21
PCDHGC3-208ENST00000622836 ABRAQ8N0Z2 381 aa16.37■□□□□ 0.21
PCDHGC3-208ENST00000622836 HOMER2Q9NSB8 354 aa16.37■□□□□ 0.21
PCDHGC3-208ENST00000622836 ATP2A1O14983 1001 aa16.36■□□□□ 0.21
PCDHGC3-208ENST00000622836 GOLGA8HP0CJ92 632 aa16.36■□□□□ 0.21
PCDHGC3-208ENST00000622836 PRKAR2AP13861 404 aaKnown RBP16.36■□□□□ 0.21
PCDHGC3-208ENST00000622836 RGS19P49795 217 aa16.36■□□□□ 0.21
PCDHGC3-208ENST00000622836 SNAP25P60880 206 aa16.36■□□□□ 0.21
PCDHGC3-208ENST00000622836 ZNF543Q08ER8 600 aa16.36■□□□□ 0.21
PCDHGC3-208ENST00000622836 TRIM32Q13049 653 aa16.36■□□□□ 0.21
PCDHGC3-208ENST00000622836 GPATCH4Q5T3I0 446 aaKnown RBP16.36■□□□□ 0.21
PCDHGC3-208ENST00000622836 STOX1Q6ZVD7 989 aa16.36■□□□□ 0.21
PCDHGC3-208ENST00000622836 CHST3Q7LGC8 479 aa16.36■□□□□ 0.21
PCDHGC3-208ENST00000622836 NPLOC4Q8TAT6 608 aa16.36■□□□□ 0.21
PCDHGC3-208ENST00000622836 ANKS1AQ92625 1134 aa16.36■□□□□ 0.21
PCDHGC3-208ENST00000622836 DDX11Q96FC9 970 aa16.36■□□□□ 0.21
PCDHGC3-208ENST00000622836 HMX1Q9NP08 348 aaPredicted RBP16.36■□□□□ 0.21
PCDHGC3-208ENST00000622836 RIPK3Q9Y572 518 aa16.36■□□□□ 0.21
PCDHGC3-208ENST00000622836 DHX16O60231 1041 aaKnown RBP16.35■□□□□ 0.21
PCDHGC3-208ENST00000622836 GJB1P08034 283 aa16.35■□□□□ 0.21
PCDHGC3-208ENST00000622836 HOXC6P09630 235 aa16.35■□□□□ 0.21
PCDHGC3-208ENST00000622836 WTAPQ15007 396 aa16.35■□□□□ 0.21
PCDHGC3-208ENST00000622836 NECTIN1Q15223 517 aa16.35■□□□□ 0.21
PCDHGC3-208ENST00000622836 ANKRD35Q8N283 1001 aa16.35■□□□□ 0.21
PCDHGC3-208ENST00000622836 AGBL1Q96MI9 1066 aa16.35■□□□□ 0.21
PCDHGC3-208ENST00000622836 DEFB118Q96PH6 123 aa16.35■□□□□ 0.21
PCDHGC3-208ENST00000622836 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.35■□□□□ 0.21
PCDHGC3-208ENST00000622836 FBXO40Q9UH90 709 aa16.35■□□□□ 0.21
PCDHGC3-208ENST00000622836 RPTORQ8N122 1335 aa16.35■□□□□ 0.21
PCDHGC3-208ENST00000622836 COBLO75128 1261 aa16.34■□□□□ 0.21
PCDHGC3-208ENST00000622836 PGK2P07205 417 aa16.34■□□□□ 0.21
PCDHGC3-208ENST00000622836 PARP1P09874 1014 aaKnown RBP16.34■□□□□ 0.21
PCDHGC3-208ENST00000622836 SNHG28P0DPA3 235 aa16.34■□□□□ 0.21
PCDHGC3-208ENST00000622836 ALAS1P13196 640 aa16.34■□□□□ 0.21
PCDHGC3-208ENST00000622836 SEC23AQ15436 765 aa16.34■□□□□ 0.21
PCDHGC3-208ENST00000622836 TMEM67Q5HYA8 995 aa16.34■□□□□ 0.21
PCDHGC3-208ENST00000622836 BTNL9Q6UXG8 535 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms