RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 EIF3CQ99613 913 aaKnown RBP11.57□□□□□ -0.56
COL25A1-209ENST00000622134 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.57□□□□□ -0.56
COL25A1-209ENST00000622134 FAM204AQ9H8W3 233 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.57□□□□□ -0.56
COL25A1-209ENST00000622134 SPATA31A1Q5TZJ5 1347 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 KIAA0753Q2KHM9 967 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 CCDC122Q5T0U0 273 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 DBNDD1Q9H9R9 158 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 SETD1BQ9UPS6 1966 aaKnown RBP11.57□□□□□ -0.56
COL25A1-209ENST00000622134 RPAP1Q9BWH6 1393 aaPredicted RBP11.57□□□□□ -0.56
COL25A1-209ENST00000622134 CHUKO15111 745 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 PEX19P40855 299 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 N4BP2L2Q92802 583 aaPredicted RBP11.57□□□□□ -0.56
COL25A1-209ENST00000622134 NRBP2Q9NSY0 501 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 FBXO40Q9UH90 709 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 RASAL2Q9UJF2 1139 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 LAMC1P11047 1609 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 ASNSP08243 561 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 NLRP12P59046 1061 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 APOBRQ0VD83 1088 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 CYP26C1Q6V0L0 522 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 FAM212AQ96EL1 285 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 ZNF341Q9BYN7 854 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 NT5C3AQ9H0P0 336 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 SRP68Q9UHB9 627 aaKnown RBP11.57□□□□□ -0.56
COL25A1-209ENST00000622134 RIPOR2Q9Y4F9 1068 aa11.57□□□□□ -0.56
COL25A1-209ENST00000622134 PKP1Q13835 747 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 ASPRV1Q53RT3 343 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 CCDC42Q96M95 316 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 SELENOSQ9BQE4 189 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 ADPGKQ9BRR6 497 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 ADAM21Q9UKJ8 722 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 ARHGEF37A1IGU5 675 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 CYP27B1O15528 508 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 APBA1Q02410 837 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 HOMEZQ8IX15 550 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 KLHDC4Q8TBB5 520 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 SERPINB13Q9UIV8 391 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 UNC13BO14795 1591 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 CCDC160A6NGH7 325 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 hCG_1984214I3L0E3 225 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 MCM7P33993 719 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 YWHAEP62258 255 aaKnown RBP11.56□□□□□ -0.56
COL25A1-209ENST00000622134 TRPC3Q13507 836 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 ZNF713Q8N859 430 aaPredicted RBP11.56□□□□□ -0.56
COL25A1-209ENST00000622134 IFT81Q8WYA0 676 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 PPP1R13BQ96KQ4 1090 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 XPO4Q9C0E2 1151 aaKnown RBP11.56□□□□□ -0.56
COL25A1-209ENST00000622134 USP44Q9H0E7 712 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 DNM3Q9UQ16 869 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 SSH2Q76I76 1423 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 STX10O60499 249 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 NOP2P46087 812 aaKnown RBP11.56□□□□□ -0.56
COL25A1-209ENST00000622134 SLMAPQ14BN4 828 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 C8orf74Q6P047 294 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.56□□□□□ -0.56
COL25A1-209ENST00000622134 CACTINQ8WUQ7 758 aaKnown RBP11.56□□□□□ -0.56
COL25A1-209ENST00000622134 CCDC77Q9BR77 488 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 HOMER2Q9NSB8 354 aa11.56□□□□□ -0.56
COL25A1-209ENST00000622134 KDM3AQ9Y4C1 1321 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 CCDC169A6NNP5 214 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 ZBTB22O15209 634 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 PRDM1O75626 825 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 DDAH1O94760 285 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 P4HA1P13674 534 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 RPS6KB1P23443 525 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 SRGAP1Q7Z6B7 1085 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 COA7Q96BR5 231 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 COMMD10Q9Y6G5 202 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 V9GY48 417 aaPredicted RBP11.55□□□□□ -0.56
COL25A1-209ENST00000622134 DIP2BQ9P265 1576 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 LRRD1A4D1F6 860 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 E7EVH7 732 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 XPOTO43592 962 aaKnown RBP11.55□□□□□ -0.56
COL25A1-209ENST00000622134 PAK2Q13177 524 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 R3HDM1Q15032 1099 aaKnown RBP11.55□□□□□ -0.56
COL25A1-209ENST00000622134 ZNF365Q70YC5 407 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 SYNE4Q8N205 404 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 IGSF22Q8N9C0 903 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 FAM193BQ96PV7 902 aaPredicted RBP11.55□□□□□ -0.56
COL25A1-209ENST00000622134 HAUS7Q99871 368 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 CXorf56Q9H5V9 222 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 PPP2R2CQ9Y2T4 447 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 ZC3H13Q5T200 1668 aaKnown RBP11.55□□□□□ -0.56
COL25A1-209ENST00000622134 ABCC4O15439 1325 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 SEC31AO94979 1220 aaKnown RBP11.55□□□□□ -0.56
COL25A1-209ENST00000622134 EPB41P11171 864 aaKnown RBP11.55□□□□□ -0.56
COL25A1-209ENST00000622134 ALDH3A1P30838 453 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 HPDP32754 393 aaPredicted RBP11.55□□□□□ -0.56
COL25A1-209ENST00000622134 KMT5BQ4FZB7 885 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 HSP90AA4PQ58FG1 418 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 SND1Q7KZF4 910 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL25A1-209ENST00000622134 SP8Q8IXZ3 490 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 ZKSCAN3Q9BRR0 538 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 AMNQ9BXJ7 453 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 CCPG1Q9ULG6 757 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 SUGT1Q9Y2Z0 365 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 SPATA31A5Q5VU36 1347 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 SPATA31A7Q8IWB4 1347 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 CLRN2A0PK11 232 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms