RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 KIAA0355O15063 1070 aa20.11■□□□□ 0.81
TARDBP-225ENST00000621715 C20orf194Q5TEA3 1177 aa20.11■□□□□ 0.81
TARDBP-225ENST00000621715 CCSAPQ6IQ19 270 aaPredicted RBP20.11■□□□□ 0.81
TARDBP-225ENST00000621715 MAFAQ8NHW3 353 aaPredicted RBP20.11■□□□□ 0.81
TARDBP-225ENST00000621715 GOPCQ9HD26 462 aa20.11■□□□□ 0.81
TARDBP-225ENST00000621715 CHD7Q9P2D1 2997 aa20.11■□□□□ 0.81
TARDBP-225ENST00000621715 REV3LO60673 3130 aa20.1■□□□□ 0.81
TARDBP-225ENST00000621715 DNAJC25-GNG10A0A024R161 153 aa20.1■□□□□ 0.81
TARDBP-225ENST00000621715 NDUFB10O96000 172 aa20.1■□□□□ 0.81
TARDBP-225ENST00000621715 FAAP100Q0VG06 881 aa20.1■□□□□ 0.81
TARDBP-225ENST00000621715 TSHZ3Q63HK5 1081 aa20.1■□□□□ 0.81
TARDBP-225ENST00000621715 RNF180Q86T96 592 aa20.1■□□□□ 0.81
TARDBP-225ENST00000621715 OSBP2Q969R2 916 aa20.1■□□□□ 0.81
TARDBP-225ENST00000621715 EPB41L4AQ9HCS5 686 aaPredicted RBP20.1■□□□□ 0.81
TARDBP-225ENST00000621715 TACC3Q9Y6A5 838 aa20.1■□□□□ 0.81
TARDBP-225ENST00000621715 IGKV6D-41A0A0C4DH26 115 aa20.09■□□□□ 0.81
TARDBP-225ENST00000621715 AKR1A1P14550 325 aa20.09■□□□□ 0.81
TARDBP-225ENST00000621715 ACLYP53396 1101 aa20.09■□□□□ 0.81
TARDBP-225ENST00000621715 SNRNP48Q6IEG0 339 aaKnown RBP20.09■□□□□ 0.81
TARDBP-225ENST00000621715 KLHDC9Q8NEP7 349 aa20.09■□□□□ 0.81
TARDBP-225ENST00000621715 SLF1Q9BQI6 1058 aa20.09■□□□□ 0.81
TARDBP-225ENST00000621715 F5H6K3 240 aa20.08■□□□□ 0.81
TARDBP-225ENST00000621715 KLRC3Q07444 240 aa20.08■□□□□ 0.81
TARDBP-225ENST00000621715 SBK1Q52WX2 424 aa20.08■□□□□ 0.81
TARDBP-225ENST00000621715 RNPC3Q96LT9 517 aaKnown RBP20.08■□□□□ 0.81
TARDBP-225ENST00000621715 TEX13BQ9BXU2 312 aa20.08■□□□□ 0.81
TARDBP-225ENST00000621715 ARPP21Q9UBL0 812 aaPredicted RBP20.08■□□□□ 0.81
TARDBP-225ENST00000621715 KCNA10Q16322 511 aa20.07■□□□□ 0.8
TARDBP-225ENST00000621715 MAMDC4Q6UXC1 1216 aa20.07■□□□□ 0.8
TARDBP-225ENST00000621715 ANKRD33Q7Z3H0 272 aa20.07■□□□□ 0.8
TARDBP-225ENST00000621715 AMOTL1Q8IY63 956 aa20.07■□□□□ 0.8
TARDBP-225ENST00000621715 TMEM39AQ9NV64 488 aa20.07■□□□□ 0.8
TARDBP-225ENST00000621715 MINDY4BA8MYZ0 360 aa20.06■□□□□ 0.8
TARDBP-225ENST00000621715 M0R2C6 588 aa20.06■□□□□ 0.8
TARDBP-225ENST00000621715 PRDM1O75626 825 aa20.06■□□□□ 0.8
TARDBP-225ENST00000621715 RAG1P15918 1043 aa20.06■□□□□ 0.8
TARDBP-225ENST00000621715 SLC4A3P48751 1232 aa20.06■□□□□ 0.8
TARDBP-225ENST00000621715 GRIN2CQ14957 1233 aa20.06■□□□□ 0.8
TARDBP-225ENST00000621715 C16orf59Q7L2K0 433 aa20.06■□□□□ 0.8
TARDBP-225ENST00000621715 CPXCR1Q8N123 301 aa20.06■□□□□ 0.8
TARDBP-225ENST00000621715 USP38Q8NB14 1042 aa20.06■□□□□ 0.8
TARDBP-225ENST00000621715 LRRCC1Q9C099 1032 aa20.06■□□□□ 0.8
TARDBP-225ENST00000621715 RAVER2Q9HCJ3 691 aaKnown RBP20.06■□□□□ 0.8
TARDBP-225ENST00000621715 NYAP2Q9P242 653 aa20.06■□□□□ 0.8
TARDBP-225ENST00000621715 ZHX1Q9UKY1 873 aaPredicted RBP20.06■□□□□ 0.8
TARDBP-225ENST00000621715 TBX21Q9UL17 535 aa20.06■□□□□ 0.8
TARDBP-225ENST00000621715 CNPY2Q9Y2B0 182 aa20.06■□□□□ 0.8
TARDBP-225ENST00000621715 SYNGAP1Q96PV0 1343 aa20.05■□□□□ 0.8
TARDBP-225ENST00000621715 CTAGE5O15320 804 aa20.05■□□□□ 0.8
TARDBP-225ENST00000621715 MS4A1P11836 297 aa20.05■□□□□ 0.8
TARDBP-225ENST00000621715 PTGS1P23219 599 aa20.05■□□□□ 0.8
TARDBP-225ENST00000621715 FPGSQ05932 587 aa20.05■□□□□ 0.8
TARDBP-225ENST00000621715 CEP95Q96GE4 821 aa20.05■□□□□ 0.8
TARDBP-225ENST00000621715 DDRGK1Q96HY6 314 aa20.05■□□□□ 0.8
TARDBP-225ENST00000621715 TSEN34Q9BSV6 310 aaKnown RBP20.05■□□□□ 0.8
TARDBP-225ENST00000621715 KATNBL1Q9H079 304 aa20.05■□□□□ 0.8
TARDBP-225ENST00000621715 STARD7Q9NQZ5 370 aa20.05■□□□□ 0.8
TARDBP-225ENST00000621715 CLIP2Q9UDT6 1046 aa20.05■□□□□ 0.8
TARDBP-225ENST00000621715 DDX49Q9Y6V7 483 aaKnown RBP20.05■□□□□ 0.8
TARDBP-225ENST00000621715 FOSL2P15408 326 aa20.04■□□□□ 0.8
TARDBP-225ENST00000621715 COPB2P35606 906 aa20.04■□□□□ 0.8
TARDBP-225ENST00000621715 LRRC47Q8N1G4 583 aaKnown RBP20.04■□□□□ 0.8
TARDBP-225ENST00000621715 KBTBD3Q8NAB2 608 aa20.04■□□□□ 0.8
TARDBP-225ENST00000621715 KIFC2Q96AC6 838 aa20.04■□□□□ 0.8
TARDBP-225ENST00000621715 SLC38A10Q9HBR0 1119 aa20.04■□□□□ 0.8
TARDBP-225ENST00000621715 ECHDC1Q9NTX5 307 aa20.04■□□□□ 0.8
TARDBP-225ENST00000621715 FAM184BQ9ULE4 1060 aa20.04■□□□□ 0.8
TARDBP-225ENST00000621715 MYO9BQ13459 2157 aa20.04■□□□□ 0.8
TARDBP-225ENST00000621715 LRRC37A2A6NM11 1700 aa20.03■□□□□ 0.8
TARDBP-225ENST00000621715 ATP2A1O14983 1001 aa20.03■□□□□ 0.8
TARDBP-225ENST00000621715 CDK7P50613 346 aa20.03■□□□□ 0.8
TARDBP-225ENST00000621715 ZSCAN25Q6NSZ9 544 aa20.03■□□□□ 0.8
TARDBP-225ENST00000621715 MSL3Q8N5Y2 521 aaKnown RBP20.03■□□□□ 0.8
TARDBP-225ENST00000621715 PRPF38AQ8NAV1 312 aaKnown RBP20.03■□□□□ 0.8
TARDBP-225ENST00000621715 DDX11Q96FC9 970 aa20.03■□□□□ 0.8
TARDBP-225ENST00000621715 TOX2Q96NM4 488 aa20.03■□□□□ 0.8
TARDBP-225ENST00000621715 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.03■□□□□ 0.81e-11■■□□□ 11.7
TARDBP-225ENST00000621715 MKNK2Q9HBH9 465 aa20.03■□□□□ 0.8
TARDBP-225ENST00000621715 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.03■□□□□ 0.8
TARDBP-225ENST00000621715 LCTP09848 1927 aa20.02■□□□□ 0.8
TARDBP-225ENST00000621715 GRXCR1A8MXD5 290 aa20.02■□□□□ 0.8
TARDBP-225ENST00000621715 GPAA1O43292 621 aa20.02■□□□□ 0.8
TARDBP-225ENST00000621715 DUSP11O75319 330 aaKnown RBP20.02■□□□□ 0.8
TARDBP-225ENST00000621715 TIMP1P01033 207 aa20.02■□□□□ 0.8
TARDBP-225ENST00000621715 DNAJB2P25686 324 aa20.02■□□□□ 0.8
TARDBP-225ENST00000621715 CNTN2Q02246 1040 aa20.02■□□□□ 0.8
TARDBP-225ENST00000621715 ACVR2BQ13705 512 aa20.02■□□□□ 0.8
TARDBP-225ENST00000621715 CCDC144BQ3MJ40 725 aa20.02■□□□□ 0.8
TARDBP-225ENST00000621715 GIMAP6Q6P9H5 292 aa20.02■□□□□ 0.8
TARDBP-225ENST00000621715 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.02■□□□□ 0.8
TARDBP-225ENST00000621715 APPBP2Q92624 585 aa20.02■□□□□ 0.8
TARDBP-225ENST00000621715 CHMP4CQ96CF2 233 aa20.02■□□□□ 0.8
TARDBP-225ENST00000621715 SEC62Q99442 399 aaKnown RBP20.02■□□□□ 0.8
TARDBP-225ENST00000621715 MTMR4Q9NYA4 1195 aa20.02■□□□□ 0.8
TARDBP-225ENST00000621715 XIRP2A4UGR9 3374 aa20.02■□□□□ 0.8
TARDBP-225ENST00000621715 ASTN1O14525 1302 aa20.02■□□□□ 0.79
TARDBP-225ENST00000621715 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.01■□□□□ 0.79
TARDBP-225ENST00000621715 MOXD2PA6NHM9 499 aa20.01■□□□□ 0.79
TARDBP-225ENST00000621715 RNF113AO15541 343 aaKnown RBP20.01■□□□□ 0.79
TARDBP-225ENST00000621715 ASGR1P07306 291 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms