RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 C6orf222P0C671 652 aaPredicted RBP2.96□□□□□ -1.94
CPNE3-211ENST00000621526 IQCF3P0C7M6 154 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 TAL1P17542 331 aaPredicted RBP2.96□□□□□ -1.94
CPNE3-211ENST00000621526 ICAM3P32942 547 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 COPB2P35606 906 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 BTDP43251 543 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 CLCN5P51795 746 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 PPP4CP60510 307 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 GSTO1P78417 241 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 JAG1P78504 1218 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 PICALMQ13492 652 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 ACVR2BQ13705 512 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 LRRFIP1Q32MZ4 808 aaKnown RBP2.96□□□□□ -1.94
CPNE3-211ENST00000621526 RABL6Q3YEC7 729 aaPredicted RBP2.96□□□□□ -1.94
CPNE3-211ENST00000621526 TIGD5Q53EQ6 642 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 METTL24Q5JXM2 366 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 TATDN1Q6P1N9 297 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 ATF7IPQ6VMQ6 1270 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 GPR161Q8N6U8 529 aaKnown RBP2.96□□□□□ -1.94
CPNE3-211ENST00000621526 RETREG2Q8NC44 543 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 RUNDC1Q96C34 613 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 ZBED2Q9BTP6 218 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 WNT8AQ9H1J5 351 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 ABHD16BQ9H3Z7 469 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 SH2B1Q9NRF2 756 aaPredicted RBP2.96□□□□□ -1.94
CPNE3-211ENST00000621526 INSL6Q9Y581 213 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 LAMB2P55268 1798 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 ZNF318Q5VUA4 2279 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 ZNF292O60281 2723 aa2.96□□□□□ -1.94
CPNE3-211ENST00000621526 TCF20Q9UGU0 1960 aaKnown RBP2.96□□□□□ -1.94
CPNE3-211ENST00000621526 GRIN2DO15399 1336 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 SYNRGQ9UMZ2 1314 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 DOCK3Q8IZD9 2030 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 LINC01553A4QN01 128 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 SOWAHBA6NEL2 793 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 FAM196BA6NMK8 535 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 SOBPA7XYQ1 873 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 PRR5-ARHGAP8B1AHC4 643 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 B4GALT4O60513 344 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 ARHGEF15O94989 841 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 BAG3O95817 575 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 RB1P06400 928 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 PLCG2P16885 1265 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 VCAM1P19320 739 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 KCNJ6P48051 423 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 VCPP55072 806 aaKnown RBP2.95□□□□□ -1.94
CPNE3-211ENST00000621526 ARHGAP8P85298 464 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 PTPN11Q06124 597 aaPredicted RBP2.95□□□□□ -1.94
CPNE3-211ENST00000621526 FLIIQ13045 1269 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 ADAM15Q13444 863 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 SMAD4Q13485 552 aaKnown RBP2.95□□□□□ -1.94
CPNE3-211ENST00000621526 BFSP2Q13515 415 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 CNGB1Q14028 1251 aaPredicted RBP2.95□□□□□ -1.94
CPNE3-211ENST00000621526 NEUROD2Q15784 382 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 LRRC24Q50LG9 513 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 IQSEC1Q6DN90 963 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 ERICH6Q7L0X2 663 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 G2E3Q7L622 706 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 FRMD5Q7Z6J6 570 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 NCAPG2Q86XI2 1143 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 DZIP1Q86YF9 867 aaKnown RBP2.95□□□□□ -1.94
CPNE3-211ENST00000621526 RIOX2Q8IUF8 465 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 UBALD2Q8IYN6 164 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 KAZALD1Q96I82 304 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 TRPV6Q9H1D0 765 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 ALDH8A1Q9H2A2 487 aaPredicted RBP2.95□□□□□ -1.94
CPNE3-211ENST00000621526 NSUN3Q9H649 340 aaKnown RBP2.95□□□□□ -1.94
CPNE3-211ENST00000621526 RPAP3Q9H6T3 665 aaPredicted RBP2.95□□□□□ -1.94
CPNE3-211ENST00000621526 C9orf78Q9NZ63 289 aaPredicted RBP2.95□□□□□ -1.94
CPNE3-211ENST00000621526 ZBTB21Q9ULJ3 1066 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 EP300Q09472 2414 aaPredicted RBP2.95□□□□□ -1.94
CPNE3-211ENST00000621526 RFX7Q2KHR2 1363 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 GPR179Q6PRD1 2367 aa2.95□□□□□ -1.94
CPNE3-211ENST00000621526 MROH7-TTC4A0A0A0MT08 1334 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 UMODL1Q5DID0 1318 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 DNAJC25-GNG10A0A024R161 153 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 LCHNA4D1U4 455 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 MYADML2A6NDP7 307 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 EYA2O00167 538 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 KPNA6O60684 536 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 GH2P01242 217 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 CXCL10P02778 98 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 PGK2P07205 417 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 ADRB1P08588 477 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 ATF7P17544 494 aaPredicted RBP2.94□□□□□ -1.94
CPNE3-211ENST00000621526 STAT3P40763 770 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 MCAMP43121 646 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 ATXN1P54253 815 aaKnown RBP2.94□□□□□ -1.94
CPNE3-211ENST00000621526 HTRA4P83105 476 aaPredicted RBP2.94□□□□□ -1.94
CPNE3-211ENST00000621526 MECOMQ03112 1051 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 TNFAIP2Q03169 654 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 COASYQ13057 564 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 FKBP5Q13451 457 aaPredicted RBP2.94□□□□□ -1.94
CPNE3-211ENST00000621526 GPM6BQ13491 265 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 IKBKEQ14164 716 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 PTPN21Q16825 1174 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 CCDC144BQ3MJ40 725 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 EPC2Q52LR7 807 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 TCEAL5Q5H9L2 206 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 ASTLQ6HA08 431 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms