RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 GNAQP50148 359 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 ATL3Q6DD88 541 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 DHX32Q7L7V1 743 aaKnown RBP10.87□□□□□ -0.67
COL4A6-210ENST00000621266 SART1O43290 800 aaKnown RBP10.87□□□□□ -0.67
COL4A6-210ENST00000621266 THAP12O43422 761 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 LTKP29376 864 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 MKRN3Q13064 507 aaKnown RBP10.87□□□□□ -0.67
COL4A6-210ENST00000621266 TRAF1Q13077 416 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 PNOCQ13519 176 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 IFT122Q9HBG6 1241 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 EEF1B2P24534 225 aaKnown RBP10.86□□□□□ -0.67
COL4A6-210ENST00000621266 CASP2P42575 452 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 FNBP1Q96RU3 617 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 FAM207AQ9NSI2 230 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-210ENST00000621266 PKD2L1Q9P0L9 805 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 YEATS2Q9ULM3 1422 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 MYO5CQ9NQX4 1742 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 SPDYE3A6NKU9 549 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 FNBP4Q8N3X1 1017 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-210ENST00000621266 MLKLQ8NB16 471 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 KLHL29Q96CT2 875 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 FAM89AQ96GI7 184 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 ANKRD2Q9GZV1 360 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 DNAJC5Q9H3Z4 198 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 INTS9Q9NV88 658 aaKnown RBP10.86□□□□□ -0.67
COL4A6-210ENST00000621266 ARHGEF10O15013 1369 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 CALUO43852 315 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-210ENST00000621266 ADCY8P40145 1251 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 CCDC125Q86Z20 511 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 PPWD1Q96BP3 646 aaKnown RBP10.86□□□□□ -0.67
COL4A6-210ENST00000621266 CCDC138Q96M89 665 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 TTLL3Q9Y4R7 772 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 CHMP2AO43633 222 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 CHMLP26374 656 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 C16orf87Q6PH81 154 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 AMFRQ9UKV5 643 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 H7C1D1 291 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 GNAT2P19087 354 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 DYDC2Q96IM9 177 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 SCYL1Q96KG9 808 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 BLZF1Q9H2G9 400 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 HYOU1Q9Y4L1 999 aa10.86□□□□□ -0.67
COL4A6-210ENST00000621266 IL13P35225 146 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 MAP3K7CLP57077 242 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 SKOR1P84550 965 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 POSTNQ15063 836 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 OTUD7BQ6GQQ9 843 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 PLEKHM2Q8IWE5 1019 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 NLRC4Q9NPP4 1024 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL4A6-210ENST00000621266 SLC12A2P55011 1212 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 GUCY2DQ02846 1103 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 TAB3Q8N5C8 712 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-210ENST00000621266 TEKT1Q969V4 418 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 ABT1Q9ULW3 272 aaKnown RBP10.85□□□□□ -0.67
COL4A6-210ENST00000621266 ZNF711Q9Y462 761 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 TMEM94Q12767 1356 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 A1BGP04217 495 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 LONP1P36776 959 aaKnown RBP10.85□□□□□ -0.67
COL4A6-210ENST00000621266 DOK7Q18PE1 504 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 NCOA5Q9HCD5 579 aaKnown RBP10.85□□□□□ -0.67
COL4A6-210ENST00000621266 ZBTB40Q9NUA8 1239 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 NOD1Q9Y239 953 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 TTC4O95801 387 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 PDHA1P08559 390 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 HOXB7P09629 217 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 SKIP12755 728 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 HIBCHQ6NVY1 386 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-210ENST00000621266 RSBN1LQ6PCB5 846 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-210ENST00000621266 PIK3AP1Q6ZUJ8 805 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 CDC37L1Q7L3B6 337 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 TRIM58Q8NG06 486 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 NPHP4O75161 1426 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-210ENST00000621266 RNF113AO15541 343 aaKnown RBP10.85□□□□□ -0.67
COL4A6-210ENST00000621266 RPS6KB1P23443 525 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 PHBP35232 272 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 PLCD1P51178 756 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 GYS2P54840 703 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 ZNF790Q6PG37 636 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 NCAPGQ9BPX3 1015 aa10.85□□□□□ -0.67
COL4A6-210ENST00000621266 PPP1R12AO14974 1030 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-210ENST00000621266 CCNT1O60563 726 aaKnown RBP10.84□□□□□ -0.67
COL4A6-210ENST00000621266 ABCB4P21439 1286 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 ARHGAP4P98171 946 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 DCUN1D2Q6PH85 259 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 ST13P4Q8IZP2 240 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-210ENST00000621266 STAMQ92783 540 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 PPP1R13BQ96KQ4 1090 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 CEP19Q96LK0 163 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 MCM9Q9NXL9 1143 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 CD2APQ9Y5K6 639 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 NEO1Q92859 1461 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 TAF5LO75529 589 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 FLOT1O75955 427 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 PLCG2P16885 1265 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 RFX1P22670 979 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 U2AF1L4Q8WU68 220 aaKnown RBP10.84□□□□□ -0.67
COL4A6-210ENST00000621266 RSAD2Q8WXG1 361 aa10.84□□□□□ -0.67
COL4A6-210ENST00000621266 PSDA5PKW4 1024 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-210ENST00000621266 MAN1A2O60476 641 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms