RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 TMEM240Q5SV17 173 aa18.76■□□□□ 0.59
SNHG28-203ENST00000621242 FAM83BQ5T0W9 1011 aa18.76■□□□□ 0.59
SNHG28-203ENST00000621242 C12orf60Q5U649 245 aa18.76■□□□□ 0.59
SNHG28-203ENST00000621242 CCSAPQ6IQ19 270 aaPredicted RBP18.76■□□□□ 0.59
SNHG28-203ENST00000621242 CCDC129Q6ZRS4 1044 aa18.76■□□□□ 0.59
SNHG28-203ENST00000621242 PRDM12Q9H4Q4 367 aa18.76■□□□□ 0.59
SNHG28-203ENST00000621242 ATP8A2Q9NTI2 1148 aa18.76■□□□□ 0.59
SNHG28-203ENST00000621242 FAM184BQ9ULE4 1060 aa18.76■□□□□ 0.59
SNHG28-203ENST00000621242 MYH7P12883 1935 aa18.75■□□□□ 0.59
SNHG28-203ENST00000621242 MBD4O95243 580 aa18.75■□□□□ 0.59
SNHG28-203ENST00000621242 COPB2P35606 906 aa18.75■□□□□ 0.59
SNHG28-203ENST00000621242 IRX5P78411 483 aaPredicted RBP18.75■□□□□ 0.59
SNHG28-203ENST00000621242 RHPN1Q8TCX5 695 aa18.75■□□□□ 0.59
SNHG28-203ENST00000621242 GLT1D1Q96MS3 346 aa18.75■□□□□ 0.59
SNHG28-203ENST00000621242 KANSL2Q9H9L4 492 aa18.75■□□□□ 0.59
SNHG28-203ENST00000621242 GOPCQ9HD26 462 aa18.75■□□□□ 0.59
SNHG28-203ENST00000621242 RAPGEFL1Q9UHV5 662 aa18.75■□□□□ 0.59
SNHG28-203ENST00000621242 ZHX1Q9UKY1 873 aaPredicted RBP18.75■□□□□ 0.59
SNHG28-203ENST00000621242 USP17L12C9JPN9 530 aa18.74■□□□□ 0.59
SNHG28-203ENST00000621242 USP17L21D6R901 530 aa18.74■□□□□ 0.59
SNHG28-203ENST00000621242 CDK7P50613 346 aa18.74■□□□□ 0.59
SNHG28-203ENST00000621242 PPIGQ13427 754 aaKnown RBP eCLIP18.74■□□□□ 0.59
SNHG28-203ENST00000621242 RASIP1Q5U651 963 aa18.74■□□□□ 0.59
SNHG28-203ENST00000621242 C16orf86Q6ZW13 317 aa18.74■□□□□ 0.59
SNHG28-203ENST00000621242 MSL3Q8N5Y2 521 aaKnown RBP18.74■□□□□ 0.59
SNHG28-203ENST00000621242 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.74■□□□□ 0.59
SNHG28-203ENST00000621242 ATXN2LQ8WWM7 1075 aaKnown RBP18.74■□□□□ 0.59
SNHG28-203ENST00000621242 DDX11Q96FC9 970 aa18.74■□□□□ 0.59
SNHG28-203ENST00000621242 CHD7Q9P2D1 2997 aa18.74■□□□□ 0.59
SNHG28-203ENST00000621242 ELP1O95163 1332 aa18.74■□□□□ 0.59
SNHG28-203ENST00000621242 MROH7Q68CQ1 1323 aa18.74■□□□□ 0.59
SNHG28-203ENST00000621242 SYNGAP1Q96PV0 1343 aa18.74■□□□□ 0.59
SNHG28-203ENST00000621242 DUSP11O75319 330 aaKnown RBP18.73■□□□□ 0.59
SNHG28-203ENST00000621242 ACRP10323 421 aa18.73■□□□□ 0.59
SNHG28-203ENST00000621242 CSF2RAP15509 400 aa18.73■□□□□ 0.59
SNHG28-203ENST00000621242 AKNAD1Q5T1N1 836 aa18.73■□□□□ 0.59
SNHG28-203ENST00000621242 SNRNP48Q6IEG0 339 aaKnown RBP18.73■□□□□ 0.59
SNHG28-203ENST00000621242 CCDC174Q6PII3 467 aa18.73■□□□□ 0.59
SNHG28-203ENST00000621242 MAMDC4Q6UXC1 1216 aa18.73■□□□□ 0.59
SNHG28-203ENST00000621242 AMOTL1Q8IY63 956 aa18.73■□□□□ 0.59
SNHG28-203ENST00000621242 VTI1AQ96AJ9 217 aa18.73■□□□□ 0.59
SNHG28-203ENST00000621242 YTHDC1Q96MU7 727 aaKnown RBP18.73■□□□□ 0.59
SNHG28-203ENST00000621242 BCL11AQ9H165 835 aa18.73■□□□□ 0.59
SNHG28-203ENST00000621242 RIPK3Q9Y572 518 aa18.73■□□□□ 0.59
SNHG28-203ENST00000621242 TCF20Q9UGU0 1960 aaKnown RBP18.73■□□□□ 0.59
SNHG28-203ENST00000621242 REV3LO60673 3130 aa18.73■□□□□ 0.59
SNHG28-203ENST00000621242 GREB1LQ9C091 1923 aaPredicted RBP18.72■□□□□ 0.59
SNHG28-203ENST00000621242 APBB1O00213 710 aa18.72■□□□□ 0.59
SNHG28-203ENST00000621242 ADCY6O43306 1168 aa18.72■□□□□ 0.59
SNHG28-203ENST00000621242 ASGR1P07306 291 aa18.72■□□□□ 0.59
SNHG28-203ENST00000621242 C6orf222P0C671 652 aaPredicted RBP18.72■□□□□ 0.59
SNHG28-203ENST00000621242 ADD2P35612 726 aa18.72■□□□□ 0.59
SNHG28-203ENST00000621242 SLC4A3P48751 1232 aa18.72■□□□□ 0.59
SNHG28-203ENST00000621242 CCDC85BQ15834 202 aaPredicted RBP18.72■□□□□ 0.59
SNHG28-203ENST00000621242 HSP90AB4PQ58FF6 505 aa18.72■□□□□ 0.59
SNHG28-203ENST00000621242 ZNF365Q70YC5 407 aa18.72■□□□□ 0.59
SNHG28-203ENST00000621242 CLASRPQ8N2M8 674 aaKnown RBP18.72■□□□□ 0.59
SNHG28-203ENST00000621242 TMEM199Q8N511 208 aa18.72■□□□□ 0.59
SNHG28-203ENST00000621242 PCSK9Q8NBP7 692 aaKnown RBP18.72■□□□□ 0.59
SNHG28-203ENST00000621242 ASB2Q96Q27 587 aa18.72■□□□□ 0.59
SNHG28-203ENST00000621242 NUP88Q99567 741 aaPredicted RBP18.72■□□□□ 0.59
SNHG28-203ENST00000621242 TEX13BQ9BXU2 312 aa18.72■□□□□ 0.59
SNHG28-203ENST00000621242 PPP1R12CQ9BZL4 782 aa18.72■□□□□ 0.59
SNHG28-203ENST00000621242 THEGQ9P2T0 379 aa18.72■□□□□ 0.59
SNHG28-203ENST00000621242 MYH4Q9Y623 1939 aa18.72■□□□□ 0.59
SNHG28-203ENST00000621242 DNAJC25-GNG10A0A024R161 153 aa18.71■□□□□ 0.59
SNHG28-203ENST00000621242 CHGBP05060 677 aa18.71■□□□□ 0.59
SNHG28-203ENST00000621242 CST5P28325 142 aaPredicted RBP18.71■□□□□ 0.59
SNHG28-203ENST00000621242 ACVR2BQ13705 512 aa18.71■□□□□ 0.59
SNHG28-203ENST00000621242 ADGRE1Q14246 886 aa18.71■□□□□ 0.59
SNHG28-203ENST00000621242 SLF1Q9BQI6 1058 aa18.71■□□□□ 0.59
SNHG28-203ENST00000621242 PAG1Q9NWQ8 432 aa18.71■□□□□ 0.59
SNHG28-203ENST00000621242 A0A0U1RQG5 324 aaPredicted RBP18.7■□□□□ 0.58
SNHG28-203ENST00000621242 ARVCFO00192 962 aa18.7■□□□□ 0.58
SNHG28-203ENST00000621242 IFIT2P09913 472 aaKnown RBP18.7■□□□□ 0.58
SNHG28-203ENST00000621242 CCDC144BQ3MJ40 725 aa18.7■□□□□ 0.58
SNHG28-203ENST00000621242 PSRC1Q6PGN9 363 aaPredicted RBP18.7■□□□□ 0.58
SNHG28-203ENST00000621242 FAM126BQ8IXS8 530 aa18.7■□□□□ 0.58
SNHG28-203ENST00000621242 ADAMTS19Q8TE59 1207 aa18.7■□□□□ 0.58
SNHG28-203ENST00000621242 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.7■□□□□ 0.58
SNHG28-203ENST00000621242 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.7■□□□□ 0.58
SNHG28-203ENST00000621242 IGFBP4P22692 258 aa18.69■□□□□ 0.58
SNHG28-203ENST00000621242 GJA9P57773 515 aa18.69■□□□□ 0.58
SNHG28-203ENST00000621242 MRPS5P82675 430 aaKnown RBP18.69■□□□□ 0.58
SNHG28-203ENST00000621242 GNASQ5JWF2 1037 aa18.69■□□□□ 0.58
SNHG28-203ENST00000621242 CTR9Q6PD62 1173 aa18.69■□□□□ 0.58
SNHG28-203ENST00000621242 ZNF467Q7Z7K2 595 aaPredicted RBP18.69■□□□□ 0.58
SNHG28-203ENST00000621242 CPXCR1Q8N123 301 aa18.69■□□□□ 0.58
SNHG28-203ENST00000621242 KIF1BPQ96EK5 621 aa18.69■□□□□ 0.58
SNHG28-203ENST00000621242 DDRGK1Q96HY6 314 aa18.69■□□□□ 0.58
SNHG28-203ENST00000621242 UPF3AQ9H1J1 476 aaKnown RBP18.69■□□□□ 0.58
SNHG28-203ENST00000621242 BOLA2Q9H3K6 86 aa18.69■□□□□ 0.58
SNHG28-203ENST00000621242 ABHD16BQ9H3Z7 469 aa18.69■□□□□ 0.58
SNHG28-203ENST00000621242 SPC25Q9HBM1 224 aa18.69■□□□□ 0.58
SNHG28-203ENST00000621242 MSRAQ9UJ68 235 aa18.69■□□□□ 0.58
SNHG28-203ENST00000621242 SLC4A4Q9Y6R1 1079 aa18.69■□□□□ 0.58
SNHG28-203ENST00000621242 ZBED9Q6R2W3 1325 aa18.69■□□□□ 0.58
SNHG28-203ENST00000621242 XIRP2A4UGR9 3374 aa18.68■□□□□ 0.58
SNHG28-203ENST00000621242 TLR3O15455 904 aaKnown RBP18.68■□□□□ 0.58
SNHG28-203ENST00000621242 CYP2C18P33260 490 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms